scholarly journals The IMG/M data management and analysis system v.6.0: new tools and advanced capabilities

2020 ◽  
Vol 49 (D1) ◽  
pp. D751-D763 ◽  
Author(s):  
I-Min A Chen ◽  
Ken Chu ◽  
Krishnaveni Palaniappan ◽  
Anna Ratner ◽  
Jinghua Huang ◽  
...  

Abstract The Integrated Microbial Genomes & Microbiomes system (IMG/M: https://img.jgi.doe.gov/m/) contains annotated isolate genome and metagenome datasets sequenced at the DOE’s Joint Genome Institute (JGI), submitted by external users, or imported from public sources such as NCBI. IMG v 6.0 includes advanced search functions and a new tool for statistical analysis of mixed sets of genomes and metagenome bins. The new IMG web user interface also has a new Help page with additional documentation and webinar tutorials to help users better understand how to use various IMG functions and tools for their research. New datasets have been processed with the prokaryotic annotation pipeline v.5, which includes extended protein family assignments.

Author(s):  
Edward F. Durner

Abstract This chapter provide information on the registration and mechanics of SAS® (Statistical Analysis System). SAS® is a software system for data management, analysis and presentation. SAS® is available for different platforms and all versions basically perform the same procedures. The main differences among them are how the user interacts with the software via the operating system. Data set size used to be an issue, often limited by the computer's memory, but that problem hardly exists anymore with today's modern machines.


2018 ◽  
Vol 47 (D1) ◽  
pp. D666-D677 ◽  
Author(s):  
I-Min A Chen ◽  
Ken Chu ◽  
Krishna Palaniappan ◽  
Manoj Pillay ◽  
Anna Ratner ◽  
...  

Author(s):  
Julie S. Doll

Abstract To enable efficient, accurate debug of Intel architecture components to take place within contract manufacturing sites, and to provide alternatives for the removal of Intel components from, Intel is deploying a diagnostic capability and attendant educational collateral known as to achieve these objectives Intel® Component Diagnostic Technology. This paper will describe details of Intel® Component Diagnostic Technology, including the diagnostic fixture and user interface, diagnostic scripts and analytical coverage, data management and reporting, and on-site and Web-based educational offerings.


2021 ◽  

Abstract The correct design, analysis and interpretation of plant science experiments is imperative for continued improvements in agricultural production worldwide. The enormous number of design and analysis options available for correctly implementing, analyzing and interpreting research can be overwhelming. Statistical Analysis System (SAS®) is the most widely used statistical software in the world and SAS® OnDemand for Academics is now freely available for academic insttutions. This is a user-friendly guide to statistics using SAS® OnDemand for Academics, ideal for facilitating the design and analysis of plant science experiments. It presents the most frequently used statistical methods in an easy-to-follow and non-intimidating fashion, and teaches the appropriate use of SAS® within the context of plant science research. This book contains 21 chapters that covers experimental designs and data analysis protocols; is presented as a how-to guide with many examples; includes freely downloadable data sets; and examines key topics such as ANOVA, mean separation, non-parametric analysis and linear regression.


Revista CEFAC ◽  
2012 ◽  
Vol 15 (1) ◽  
pp. 105-110 ◽  
Author(s):  
Mirian Hideko Nagae ◽  
Marcelo Corrêa Alves ◽  
Renato Lyuti Kinoshita ◽  
Zélia Z L de Camargo Bittencourt ◽  
Heloisa Gagliardo

OBJETIVO: investigar a qualidade de vida de sujeitos com respiração oral ou oronasal. MÉTODO: compuseram a amostra 49 voluntários, distribuídos em dois grupos: grupo de respiradores orais com 24 sujeitos e grupo de respiradores oronasais com 25 sujeitos, com faixa etária ente 18 e 38 anos de idade, de ambos os sexos. O protocolo utilizado foi o WHOQOL-BREF (versão em português) e o registro e análise dos dados foi realizado pelo sistema Statistical Analysis System. RESULTADOS: os resultados obtidos foram submetidos aos testes de qui-quadrado de Mantel-Haenszele análise de variância. A qualidade de vida dos respiradores mistos se revelou inferior nos domínios ambiental, físico e psicológico em relação aos respiradores orais. CONCLUSÃO: com a detecção das diferenças obtidas, o estudo chama a atenção para a necessidade de aprofundar investigações sobre o perfil dos respiradores oronasais e sua relevância. Para que condutas como desconsiderar o grupo de respiradores oronasais ou agrupá-los como respiradores orais não sejam adotadas de forma inadequada.


2000 ◽  
Vol 29 (5) ◽  
pp. 1327-1331 ◽  
Author(s):  
Francisco Aloísio Cavalcante ◽  
Raimundo Martins Filho ◽  
Claudio Cabral Campello ◽  
Raimundo Nonato Braga Lobo ◽  
Gabrimar Araujo Martins

O estudo foi conduzido para avaliar intervalo de partos (IDP) na raça Nelore, utilizando 578 dados de intervalo de partos de animais criados em regime de pasto, no período de 1988 a 1996. Para as análises estatísticas dos dados, foi usado o Programa SAS (Statistical Analysis System). Foram incluídos no modelo o efeito aleatório do pai da vaca, os efeitos fixos de grupo genético da cria anterior, de ano do parto anterior e do mês do parto anterior e as interações entre grupo genético anterior e mês do parto anterior, grupo genético anterior e ano do parto anterior, além da idade da vaca ao parto como covariável. O IDP foi influenciado pelo pai da vaca e pelo ano do parto anterior. A média estimada por quadrado mínimo e seu respectivo erro-padrão (EP) e coeficiente de variação (CV) foram 431,83 ± 142,76 dias e 33,06%, respectivamente. O intervalo de partos, além do efeito de pai, sofreu influência de ambiente. O desempenho reprodutivo do rebanho estudado, para as condições de clima tropical, pode ser considerado como satisfatório, estando de acordo com os parâmetros obtidos por outros autores em diferentes regiões.


Author(s):  
Esther Marina Ruiz Lobaina ◽  
Pedro Lázaro Romero Suárez

Este trabajo muestra los resultados alcanzados durante la búsqueda de patrones ocultos, aplicando algoritmos estadísticos, a una base de datos bibliográfica. Para esta investigación se seleccionó el software WinIDAMS v.1.3, que utiliza para el manejo de los datos la construcciónde un dataset IDAMS (BUILD) y la agrupación de datos (AGGREG), para el análisis estadístico los algoritmos Análisis de conglomerados (CLUSFIND) y los diagramas de dispersión (SCAT). Para las salidas de los resultados este software ofrece las tablas multidimensionales, capaces de crear por cada grupo de variables seleccionadas una tabla interna con resultados como la frecuencia y la media aritmética, que fueron las seleccionadas para estas pruebas, mientras que para la representación gráfica de los resultados se decidió utilizar los histogramas porque son gráficas de barras que permiten interpretar de forma muy fácil y rápida el comportamiento de las variables seleccionadas para el análisis. Este estudio encontró patrones a través de la clusterización con los cuales fue posible potenciar los servicios de difusión selectiva de la información y proponer nuevos servicios para que formen parte de los productos que brinda la biblioteca. This work shows the results obtained during the search for hidden patterns using statistical algorithms, in a bibliographic database. For this research the WinIDAMS v.1.3 software, used for data management, building an IDAMS dataset (BUILD) and Data Group (AGGREG) for statistical analysis algorithms, Cluster analysis was selected (CLUSFIND) and scatterplots (SCAT). In addition to the outputs of the results this software provides multidimensional tables, able to create for each group of selected variables, an internal table with results such as frequency and average arithmetic were selected for these tests, while for graphical representation of theresults, it was decided to use histograms, because they are bar graphs that allow us to interpret very easily and quickly, the behavior of the variables selected for analysis. This study found patterns through clustering, with which services could enhance Selective Dissemination of Information and propose new services, to become part of the products offered by the library.


Curationis ◽  
2021 ◽  
Vol 44 (1) ◽  
Author(s):  
Warriodene Hansen

Background: The new role as professional nurse can be a difficult transition for the new qualified nurses. During this time, factors such as not being well prepared, working without supervision and a lack of guidance can be the result of a difficult transition.Objectives: The purpose of this study is to assess the perceptions of newly qualified nurses on the guidance given by their preceptors towards becoming experts in practice at a Level II regional hospital in the Western Cape.Method: A non-experimental quantitative descriptive design was followed. Collection of data was done by means of a questionnaire, designed by the researcher, using a cross-sectional research method. Non-probability sampling produced a sample of 162 nurses comprising registered nurses (48.2%), enrolled nurses (32.7%), and enrolled nursing auxiliaries (19.1%). Statistical analysis was performed using the Statistical Analysis System (SAS), version 9.3.Results: The results of the research study indicated that respondents had more positive experiences than negative ones. The respondents indicated that for the role and characteristics of the preceptor, expectations were met for knowledgeability, professionalism and contribution to team work. Furthermore, the results indicated that the respondents would recommend preceptorship.Conclusion: Preceptorship is one of the major interventions available to support newly qualified nurses by easing the transition from student to practicing nurse and reducing the theory-practice gap. The findings emphasised the importance of ongoing support programmes for nurses after obtaining a new qualification or/and being a new nurse.


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