scholarly journals UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein–DNA interactions

2014 ◽  
Vol 43 (D1) ◽  
pp. D117-D122 ◽  
Author(s):  
Maxwell A. Hume ◽  
Luis A. Barrera ◽  
Stephen S. Gisselbrecht ◽  
Martha L. Bulyk
Keyword(s):  
Protein Binding ◽  
Microarray Data ◽  
Online Database ◽  
Dna Interactions ◽  
Protein Binding Microarray ◽  
Protein Dna Interactions

scholarly journals A perspective on the molecular simulation of DNA from structural and functional aspects

2021 ◽  
Author(s):  
Manas Mondal ◽  
Lijiang Yang ◽  
Zhicheng Cai ◽  
Piya Patra ◽  
Yi Qin Gao
Keyword(s):  
Gene Regulation ◽  
Environmental Factors ◽  
Protein Binding ◽  
Structural Organization ◽  
Atomistic Simulations ◽  
Dna Interactions ◽  
Structure And Dynamics ◽  
Functional Aspects ◽  
Protein Dna Interactions ◽  
Base Modifications

An overview of atomistic simulations on the effect of sequences, base modifications, environmental factors and protein binding on DNA’s hierarchical structure and dynamics in the context of protein–DNA interactions, gene regulation and structural organization of chromatin.

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