scholarly journals First Report of Dickeya fangzhongdai Causing Soft Rot of Onion in New York State

Plant Disease ◽  
2020 ◽  
Vol 104 (4) ◽  
pp. 1251
Author(s):  
Xing Ma ◽  
Jean M. Bonasera ◽  
Jo Ann E. Asselin ◽  
Steven V. Beer ◽  
Bryan Swingle
1989 ◽  
Vol 25 (2) ◽  
pp. 270-272 ◽  
Author(s):  
Susan E. Wade ◽  
Wayne I. Anderson ◽  
Jeffrey D. Kidder

Plant Disease ◽  
2021 ◽  
Author(s):  
Xing Ma ◽  
Paul Stodghill ◽  
Miao Gao ◽  
Keith L. Perry ◽  
Bryan Swingle

Soft rot bacteria classified in the Pectobacteriaceae (SRP), including Pectobacterium and Dickeya spp., are responsible for soft rot and blackleg diseases of potato. Since 2014, blackleg outbreaks caused by D. dianthicola have increased in the US and Canada. Our previous study found that the most abundant causal organisms of blackleg disease in New York State were P. parmentieri and D. dianthicola, with the latter being the only Dickeya species reported. In the present study, we identified and characterized pathogenic SRP bacteria from 19 potato samples collected in New York State during the 2017 growing season. We used genome sequence comparison to determine the pathogens’ species. We found eight P. versatile, one P. atrosepticum, two P. carotovorum, two P. parmentieri, and six D. dianthicola isolates in our 2017 sample SRP collection. This is the first time that P. versatile is reported to cause potato blackleg disease in New York State. We determined the phylogenetic relationships between the SRP strains using 151 single copy orthologous gene sequences shared among the set of bacteria in our analysis, which provided better resolution than phylogenies constructed using the dnaX gene.


Plant Disease ◽  
2012 ◽  
Vol 96 (9) ◽  
pp. 1373-1373
Author(s):  
S. Kenaley ◽  
M. Daughtrey ◽  
D. O'Brien ◽  
S. Jensen ◽  
K. Snover-Clift ◽  
...  

Owing to their relative disease resistance and showy spring flowers, cultivars of Callery pear (Pyrus calleryana) are commonly planted ornamental and streetside trees in New York state and elsewhere in the U.S. Over the past 2 years, we collected a leaf rust on P. calleryana ‘Bradford’ or ‘Chanticleer’ (also known as ‘Cleveland Select’) from Hempstead (Nassau County), East Moriches and Riverhead (Suffolk Co.), Rochester (Monroe Co.), and Staten Island (Richmond Co.), NY. Leaf samples were collected in June and August 2010 and 2011; adaxial surface lesions resembled infection by fungi in the genus Gymnosporangium (Pucciniales). Lesions were yellow- to red-orange with irregular red to purple margins, 1 to 3.5 cm in any one dimension, and contained 20 to 45 black, subepidermal spermogonia. Hypertrophied plant tissue was evident on the abaxial surface below the spermagonia, but aecia were absent. Genomic DNA was extracted from rust-infected tissue on P. calleryana ‘Bradford’ (East Moriches, Hempstead, Rochester, and Staten Island) and ‘Chanticleer’ (Riverhead), and the D1/D2 domain of the 28s ribosomal DNA was PCR-amplified using primers 4 and 11 (3) and sequenced. Partial 28s rDNA sequences (GenBank Accession Nos. JN969962 to JN969966) were either identical or nearly so (99%) to that of the trellis rust fungus, G. sabinae (AF426209 and AY512845). G. sabinae produces aecia with conspicuous balanoid peridia from August to November or until leaf drop; both characteristics are unique to the genus (1). We therefore monitored rust-infected Callery pears in Riverhead as well as a common pear (P. communis) in Ithaca, NY, for the appearance of aecia in 2011. The telial state of G. sabinae on taxa in the genus Juniperus sect. Sabina (e.g., J. sabina and J. virginiana) was not observed within the vicinity of affected pears. In late September, aecia of G. sabinae with morphological features identical to those described by Kerns (1) and Yun et al. (4) were collected from a P. calleryana in Riverhead (Cornell Plant Pathology Herbarium; CUP-067943) and a P. communis in Ithaca (CUP-067943): aecia roestelioid, hypophyllous; periderium balanoid, apex intact and conic, cancellate along the sides; aeciospores brown, globoid to broadly ellipsoid, 22.5 to 28.2 × 25.1 to 32.4 μm, walls 3.3 to 4.7 μm thick. A native of Eurasia and North Africa, G. sabinae was first identified in North America on common pear in 1960 in British Columbia and California (2). Thereafter, the fungus was collected on Callery pear in northern Washington in 1988 and recently, in Michigan in 2009 (4). To our knowledge, this is the first report of G. sabinae on P. calleryana ‘Bradford’ and ‘Chanticleer’ as well as P. communis in New York and the new records represent a large (>800 km) eastward expansion of the distribution of the pathogen in the U.S. The geographic locations of affected trees described herein suggest that the trellis rust fungus is well-established across New York, and has spread undetected since its introduction. Given the widespread planting of Callery pear and occurrence of susceptible Juniperus spp. in urban landscapes of New York, G. sabinae has the potential to become a perennial problem where epidemiological conditions permit host alternation. References: (2) F. Kerns. A revised taxonomic account of Gymnosporangium, 1973. (4) A. McCain. Plant Dis. Rep. 45:151, 1961. (1) G. Van der Auwera et al. FEBS Lett. 338:133, 1994. (3) H. Yun et al. Plant Dis. 93:841, 2009.


Plant Disease ◽  
2018 ◽  
Vol 102 (9) ◽  
pp. 1834-1840 ◽  
Author(s):  
Xing Ma ◽  
Allison Schloop ◽  
Bryan Swingle ◽  
Keith L. Perry

Beginning in 2014, outbreaks of blackleg disease compromised potato (Solanum tuberosum) production in the northeastern United States. Disease severity was atypical for plantings with certified seed. During 2016, 43 samples with blackleg symptoms were analyzed, originating from more than 20 farms operating in New York State. A combination of techniques was employed to identify the blackleg pathogens: isolation in vitro, diagnostic PCR assays for Pectobacterium and Dickeya sp., pathogenicity assays, and DNA sequencing. Twenty-three bacterial isolates were obtained, the majority of which were designated D. dianthicola or P. parmentieri; two of the isolates were designated P. atrosepticum. All isolates were pathogenic in stem lesion and tuber soft rot assays and exhibited pectin degrading activity (pitting) in crystal violet pectate agar medium. Phylogenetic analyses of dnaX gene sequences placed all but one of the isolates into clades corresponding to D. dianthicola, P. parmentieri, or P. atrosepticum. One atypical isolate clustered with P. carotovorum subspecies. Data are consistent with the hypothesis that D. dianthicola from New York and the northeast are part of a single clade, and at least three different soft rot bacteria were associated with blackleg during 2016 in New York.


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