scholarly journals Eight Species of Fusarium Cause Root Rot of Corn (Zea mays) in South Dakota

2019 ◽  
Vol 20 (1) ◽  
pp. 38-43 ◽  
Author(s):  
Paul N. Okello ◽  
Kristina Petrović ◽  
Brian Kontz ◽  
Febina M. Mathew

Fusarium root rot of corn (Zea mays L.) is yield-limiting in the United States, but there is no information available on the disease in South Dakota. In 2015, corn seedlings with discolored roots were arbitrarily sampled from 50 South Dakota fields, and 198 isolates were recovered. Eight species (F. acuminatum, F. boothii, F. equiseti-incarnatum complex, F. graminearum, F. oxysporum, F. proliferatum, F. solani, and F. subglutinans) were identified by morphology and translation elongation factor 1-α gene sequencing. F. graminearum (26.8%) was the most common fungus, and F. boothii (0.5%) was the least recovered. Fourteen isolates, representing the eight species, were evaluated for their pathogenicity on 2-week-old seedlings of inbred ‘B73’ using the inoculum layer method in the greenhouse. Fourteen days postinoculation, root rot severity was evaluated on a 1-to-5 rating scale and expressed as relative treatment effects (RTEs). F. proliferatum isolate P2 caused significantly greater RTE (based on 95% confidence intervals) on seedlings than the other isolates and the noninoculated control, except F. graminearum isolate FG23. This study indicates that the eight species of Fusarium are aggressive root rot pathogens of corn in South Dakota, and this information will help evaluate strategies for producers to manage these pathogens in their fields.

2018 ◽  
Vol 19 (3) ◽  
pp. 188-192
Author(s):  
Paul N. Okello ◽  
Kristina Petrović ◽  
Brian Kontz ◽  
Shaukat Ali ◽  
Laura F. Marek ◽  
...  

Brassica carinata is an emerging oilseed crop in the United States, and root diseases caused by Fusarium have the potential to cause yield losses in production. In this study, B. carinata plants were randomly sampled at vegetative and seed development plant stages from South Dakota State University experimental plots. Reddish-brown lesions were observed on roots of sampled plants from which F. acuminatum, F. oxysporum, F. solani, and F. sporotrichioides were recovered. The Fusarium species were identified based on morphology and phylogenetic analyses of the translation elongation factor 1-α gene region. Pathogenicity of the four Fusarium species was evaluated on five B. carinata accessions using a modified inoculum layer method in the greenhouse. At 21 days after inoculation, root rot severity caused by Fusarium on the B. carinata accessions was assessed on a rating scale of 0 to 4 and evaluated using relative treatment effects (RTEs). The F. oxysporum isolate caused significant differences in RTE (P = 0.01) among the B. carinata accessions. However, there were no significant differences in RTE among the B. carinata accessions in response to F. acuminatum (P = 0.82), F. solani (P = 0.76), and F. sporotrichioides (P = 0.47) isolates.


Plant Disease ◽  
2021 ◽  
Author(s):  
Hong Tao Shao ◽  
Haiying Li

Sugar beet (Beta vulgaris L.) is an important crop that has significant economic value in northern regions of China, especially in Heilongjiang Province. In October 2019, root rot was discovered on the sugar beet cultivar HDW09 in Hulan (126°64′ E, 46°00′ N), Heilongjiang Province, China. Typical symptoms included lesions on root tissues, which were initially small and dark brownish, then gradually turned into irregular shapes and black in color. As the disease progressed, the extent of necrosis penetrated from external layers into inner tissue. Root tissues suffered from severe decay, which resembles symptoms of several previously reported root rot diseases of sugar beet(Harveson 2006). To identify the pathogen, pieces of the transition zones (3-5mm) between asymptomatic and symptomatic tissues were surface sterilized for 15 seconds in 1% NaClO, rinsed twice with sterilized distilled water, plated on corn meal agar supplemented with penicillin G (50 mg/L), and incubated at 25 ± 2°C in the dark. Isolates belonging to a Calonectria sp. were recovered and purified using the hyphal tipping technique. Four isolates including A1, A5, A6, and A7 were used for morphological characterization and identification by DNA sequencing. The seven-day-old colonies on malt extract agar produced buff and wooly aerial mycelia. They were sienna to umber in color. Chlamydospores and microsclerotia were produced abundantly throughout the medium. For further identification, the isolates were cultured on potato dextrose agar (PDA) at room temperature(25°C) under near-ultraviolet light irradiation. Macroconidiophores comprised of a stipe, a penicillate arrangement of fertile branches, a stipe extension, and a terminal vesicle. Stipe extension were septate, straight to flexuous, 61–117 μm long, 2–4 μm wide at the apical septum, terminating in a sphaeropedunculate vesicle, 5–9 μm diam. Conidiogenous apparatus were 31–177 μm long, and 16–110 μm wide(n=30). Primary branches of conidiogenous apparatus were aseptate or 1-septate, 16–51 × 3–7 µm; secondary branches aseptate, 6–31 × 2–7 µm; tertiary branches aseptate, 8–19 × 2–6 µm, each terminal branch producing 1–6 phialides. Conidia cylindrical were rounded at both ends, straight, 32–53 × 3–5 µm, (mean = 47 × 4 µm), 1–septate, lacking a visible abscission scar, held in parallel cylindrical clusters by colorless slime(n=100). Partial sequences of calmodulin (Carbone et al. 1999), histone H3, the translation elongation factor 1-alpha, and beta-tubulin 2 (Crous et al. 2004) genes of the four isolates were obtained and deposited into GenBank under accession numbers MW118652 to MW118667. BLAST results showed that the calmodulin, histone H3, the translation elongation factor 1-alpha and beta-tubulin 2 sequences of A1, A5, A6 and A7 were highly identical to the sequences of Ca. montana strain CERC 8957 MF527082.1 (CAL) (99–100%), CERC 8930 MF527061.1 (HIS) ( 98–99%), HSP4 MN356465.1 (EF1-alpha) (100%) and HSP4 MN356460.1 (tub2) (98–99%), respectively. A phylogenetic tree using the maximum likelihood algorithm and sequences of the four concatenated genes was reconstructed in RAxML and revealed that the four isolates clustered in the clade of Ca. montana. The pathogen was identified as Ca. montana based upon these morphological and molecular traits(Liu et al. 2017; Stępniewska et al. 2020). Ten eight-week-old sugar beet plants without root rot symptoms were selected for pathogenicity test. The roots near the ground were carefully cleaned with hands. One mycelial plug (5 mm in diameter) from a seven-day-old colony of isolate A1 were used to inoculate each sugar beet root. Ten plants inoculated with plugs of noncolonized PDA served as the control plants. Pathogenicity tests were repeated three times. Plants were incubated under greenhouse conditions at 25 ± 2°C and watered when the surface soil appeared dry. All inoculated plants showed symptoms that resembled those in the field after 30 days, while the control plants remained healthy. The symptomatic tissues were plated in corn meal agar for 7 days at 25°C. Ca. montana was reisolated from 100% of the inoculated tissues, and identification was confirmed by molecular sequencing, validating Koch’s postulates. This is the first report of Ca. montana in China causing root rot on sugar beet. The study suggests its broader host range and wider geographical distribution than ever known and lays a basis for further monitoring and managing this important pathogen.


Gene ◽  
1992 ◽  
Vol 120 (2) ◽  
pp. 315-316 ◽  
Author(s):  
Anneke M. Metz ◽  
Richard T. Timmer ◽  
M.Leah Allen ◽  
Karen S. Browning

Life ◽  
2018 ◽  
Vol 8 (3) ◽  
pp. 31 ◽  
Author(s):  
Alessia Marchetta ◽  
Bert Gerrits van den Ende ◽  
Abdullah Al-Hatmi ◽  
Ferry Hagen ◽  
Polona Zalar ◽  
...  

A global set of clinical and environmental strains of the halotolerant black yeast-like fungus Hortaea werneckii are analyzed by multilocus sequencing and AFLP, and physiological parameters are determined. Partial translation elongation factor 1-α proves to be suitable for typing because of the presence/absence of introns and also the presence of several SNPs. Local clonal expansion could be established by a combination of molecular methods, while the population from the Mediterranean Sea water also responds differently to combined temperature and salt stress. The species comprises molecular populations, which in part also differ physiologically allowing further diversification, but clinical strains did not deviate significantly from their environmental counterparts.


Phytotaxa ◽  
2019 ◽  
Vol 425 (5) ◽  
pp. 259-268
Author(s):  
XIAO-XIAO FENG ◽  
JIA-JIE CHEN ◽  
GUO-RONG WANG ◽  
TING-TING CAO ◽  
YONG-LI ZHENG ◽  
...  

During an exploration of plant pathogens in vegetables occuring in Zhejiang province, China, a novel fungal species, was found. Three strains ZJUP0033-4, ZJUP0038-3 and ZJUP0132 were isolated from black round lesions in the stems and leaves of Amaranthus sp. Phylogenetic analyses based on sequences from four genes including rDNA internal transcribed spacer (ITS), translation elongation factor 1-α (EF1-α), histone (HIS) and β-tubulin (TUB) indicated that D. sinensis clustered in a distinct clade closely related to D. neoarctii, D. angelicae, D. subordinaria, D. arctii, D. cuppatea, D. lusitanicae, D. novem, D. infecunda, D. ganjae and D. manihotia. Morphologically, D. sinensis is distinguished by brown, scattered, globose pycnidia and ellipsoid alpha conidia with bi- to multiguttulate.


Phytotaxa ◽  
2021 ◽  
Vol 479 (1) ◽  
pp. 23-43
Author(s):  
NARUEMON HUANALUEK ◽  
RUVISHIKA S. JAYAWARDENA ◽  
SAJEEWA S. N. MAHARACHCHIKUMBURA ◽  
DULANJALEE L. HARISHCHANDRA

Pestalotioid fungi commonly occur as pathogens, endophytes or saprobes. In this study, pestalotioid fungi associated with leaf spots and fruit rots were isolated from Alpinia malaccensis, A. galangal, Annona squamosa, Artocarpus heterophyllus, Citrus sp., Garcinia mangostana, Litsea petiolata, a pteridophyte, and Vitis vinifera in Chiang Rai, Thailand. Based on single- and multi-locus phylogenies using internal transcribed spacer, β-tubulin and partial translation elongation factor 1-α gene regions, along with morphological features, the isolates were identified as two new species, Neopestalotiopsis hydeana and Pestalotiopsis hydei. This is the first time a Pestalotiopsis sp. was reported associated with Litsea petiolata and a Neopestalotiopsis sp. recorded from Alpinia, Annona, Artocarpus, Garcinia and a pteridophyte in the world. This fungal group can be considered as an emerging pathogenic group on different hosts in different climatic conditions. 


2014 ◽  
Vol 53 (3) ◽  
pp. 215-224 ◽  
Author(s):  
Hossein Mirhendi ◽  
Koichi Makimura ◽  
G. Sybren de Hoog ◽  
Ali Rezaei-Matehkolaei ◽  
Mohammad Javad Najafzadeh ◽  
...  

PROTOPLASMA ◽  
1994 ◽  
Vol 180 (3-4) ◽  
pp. 99-105 ◽  
Author(s):  
N. A. Durso ◽  
R. J. Cyr

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