Does Genetic Diversity of HIV-1 Non-B Subtypes Differentially Impact Disease Progression in Treatment-Naive HIV-1–Infected Individuals? A Systematic Review of Evidence

2012 ◽  
Vol 59 (4) ◽  
pp. 382-388 ◽  
Author(s):  
Nitika Pant Pai ◽  
Sushmita Shivkumar ◽  
Jorge Martinez Cajas
Author(s):  
Marwa Adel Afify ◽  
Iman Gamal Ghareeb Ahmed ◽  
Theeb Ayedh Alkahtani ◽  
Raed Ibrahim Altulayhi ◽  
Amjad Saud Mhrb Alrowili ◽  
...  

2011 ◽  
Vol 51 (3) ◽  
pp. 186-191 ◽  
Author(s):  
Tiago Gräf ◽  
Caroline P.B. Passaes ◽  
Luis G.E. Ferreira ◽  
Edmundo C. Grisard ◽  
Mariza G. Morgado ◽  
...  

2005 ◽  
Vol 79 (14) ◽  
pp. 9006-9018 ◽  
Author(s):  
Ryan M. Troyer ◽  
Kalonji R. Collins ◽  
Awet Abraha ◽  
Erika Fraundorf ◽  
Dawn M. Moore ◽  
...  

ABSTRACT This study examined the relationship between ex vivo human immunodeficiency virus type 1 (HIV-1) fitness and viral genetic diversity during the course of HIV-1 disease. Primary HIV-1 isolates from 10 patients at different time points were competed against control HIV-1 strains in peripheral blood mononuclear cell (PBMC) cultures to determine relative fitness values. Patient HIV-1 isolates sequentially gained fitness during disease at a significant rate that directly correlated with viral load and HIV-1 env C2V3 diversity. A loss in both fitness and viral diversity was observed upon the initiation of antiretroviral therapy. A possible relationship between genotype and phenotype (virus replication efficiency) is supported by the parallel increases in ex vivo fitness and viral diversity during disease, of which the correlation is largely based on specific V3 sequences. Syncytium-inducing, CXCR4-tropic HIV-1 isolates did have higher relative fitness values than non-syncytium-inducing, CCR5-tropic HIV-1 isolates, as determined by dual virus competitions in PBMC, but increases in fitness during disease were not solely powered by a gradual switch in coreceptor usage. These data provide in vivo evidence that increasing HIV-1 replication efficiency may be related to a concomitant increase in HIV-1 diversity, which in turn may be a determining factor in disease progression.


2016 ◽  
Vol 32 (12) ◽  
pp. 1223-1228 ◽  
Author(s):  
Firoz Abdoel Wahid ◽  
Rachel Sno ◽  
Edith Darcissac ◽  
Anne Lavergne ◽  
Malti R. Adhin ◽  
...  

Author(s):  
Christian Mangala ◽  
Joseph Fokam ◽  
Denis Maulot Bangola ◽  
Thérèse Nkoa

Background: The genetic diversity of human immunodeficiency virus type 1 (HIV-1) is a real problem facing blood banks. This genetic diversity has a negative impact on diagnostic strategies within the transfusion chain by weakening the security of the donation. The objective of this study is to clarify the concepts emanating from the research project entitled : «Genetic diversity of HIV-1 and its effect on the residual risk in blood transfusion in Gabon». Methods: This study was the result of a systematic review and a conceptual analysis of several studies that were systematically searched for in databases (PubMed, Google Scholar, and Medline), and whose object was focused on the genetic diversity of HIV -1 and its impact on transfusion safety. Indeed, the information relating to the concepts coming from the full articles was used. These were obtained by reading the most relevant articles. All relevant studies reporting data on HIV-1 genetic diversity and blood safety published in English between January 2012 and December 2020 have been identified for context. The method of conceptual analysis of « Walker and Avant (2005) » was used to clarify the different concepts of our study. The correlation test was used to show the relationship between the concepts. Results: This systematic review and conceptual analysis study made it possible to determine the variables and to clarify the different concepts (HIV-1, Genetic diversity, Blood transfusion, Residual risk) essential for carrying out our research project entitled: "Genetic diversity of HIV-1 and its effect on the residual risk in blood transfusion". This model made it possible to show the effect of the genetic diversity of HIV-1 on the residual risk in blood transfusion using as model variables : viral load and serological markers (Antibodies and P24 Antigen). Knowledge of molecular strains (URF, CRF, subtypes) during this study made it possible to better identify the molecular strains most involved in the residual risk. Despite its complexity, this conceptual analysis contributed enormously to the understanding of the activities and the quantifiable and non-quantifiable components that participated in our study. Statistical analysis showed that the HIV-1 concept was significantly related to the other three concepts with P = 0.001. Likewise for the concept of genetic diversity was also significantly linked to the two other concepts with P = 0.003. Conclusion: The genetic diversity of HIV-1 in the blood transfusion environment contributes significantly to the transmission of HIV from donor to recipient. The mastery of these molecular strains is essential for the various blood banks to ensure a safe blood supply.


Gene ◽  
2018 ◽  
Vol 677 ◽  
pp. 182-188
Author(s):  
Meide Wei ◽  
Chengzhi Rong ◽  
Jiangyang Zhao ◽  
Xin Liu ◽  
Fengxun Yang ◽  
...  

2016 ◽  
Vol 32 (4) ◽  
pp. 373-376 ◽  
Author(s):  
Lindomar dos Anjos Silva ◽  
Flavia Divino ◽  
Márlisson Octávio da Silva Rêgo ◽  
Ivina Geselle Lima Lopes ◽  
Cláudia Maria Nóbrega Costa ◽  
...  

2021 ◽  
Vol 21 (1) ◽  
Author(s):  
Katharina Nickel ◽  
Nicholas J. A. Halfpenny ◽  
Sonya J. Snedecor ◽  
Yogesh Suresh Punekar

An amendment to this paper has been published and can be accessed via the original article.


2017 ◽  
Vol 33 (9) ◽  
pp. 952-959 ◽  
Author(s):  
Fabiola Villanova ◽  
Marta Barreiros ◽  
Luiz Mário Janini ◽  
Ricardo Sobhie Diaz ◽  
Élcio Leal

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