scholarly journals Effects of plant community history, soil legacy and plant diversity on soil microbial communities

2020 ◽  
Author(s):  
Marc W. Schmid ◽  
Sofia J. van Moorsel ◽  
Terhi Hahl ◽  
Enrica De Luca ◽  
Gerlinde B. Deyn ◽  
...  
Keyword(s):  
Field Experiment ◽  
Plant Species ◽  
Plant Community ◽  
Plant Communities ◽  
Plant Diversity ◽  
Soil Microbial Diversity ◽  
Soil Microbial ◽  
Community History ◽  
Soil Legacy ◽  
Bacterial Richness

AbstractPlant and soil microbial diversity are linked through a range of interactions, including the exchange of carbon and nutrients but also herbivory and pathogenic effects. Over time, associations between plant communities and their soil microbiota may strengthen and become more specific, resulting in stronger associations between plant and soil microbial diversity. We tested this hypothesis in a 4-year long field experiment in which we factorially combined plant community history and soil legacy with plant diversity (1, 2, 4, 8, 60 species). Plant community history and soil legacy refer to the presence (“old”) or absence (“new”) of a common history of plants and soils in 52 different plant species compositions during 8 years in a long-term biodiversity experiment in Jena, Germany. After 4 years of growth, we took soil samples in the new field experiment and determined soil bacterial and fungal composition in terms of operational taxonomic units (OTUs) using 16S rRNA gene and ITS DNA sequencing. Plant community history did not affect overall soil community composition but differentially affected bacterial richness and abundances of specific bacteria taxa in association with particular plant species compositions. Soil legacy markedly increased soil bacterial richness and evenness and decreased fungal evenness. Soil fungal richness increased with plant species richness, regardless of plant community history or soil legacy, with the strongest difference between plant monocultures and mixtures. Particular plant species compositions and functional groups were associated with particular bacterial and fungal community compositions. Grasses increased and legumes decreased fungal richness and evenness. Our findings indicate that as experimental ecosystems varying in plant diversity develop over 8 years, plant species associate with specific soil microbial taxa. This can have long-lasting effects on belowground community composition in re-assembled plant communities, as reflected in strong soil legacy signals still visible after 4 years of growing new plant communities. Effects of plant community history on soil communities are subtle and may take longer to fully develop.

scholarly journals Effects of plant community history, soil legacy and plant diversity on soil microbial communities

2021 ◽  
Author(s):  
Marc W. Schmid ◽  
Sofia J. van Moorsel ◽  
Terhi Hahl ◽  
Enrica De Luca ◽  
Gerlinde B. Deyn ◽  
...  
Keyword(s):  
Microbial Communities ◽  
Plant Community ◽  
Plant Diversity ◽  
Soil Microbial Communities ◽  
Soil Microbial ◽  
Community History ◽  
Soil Legacy

scholarly journals Evidence of within-species specialization by soil microbes and the implications for plant community diversity

2019 ◽  
Vol 116 (15) ◽  
pp. 7371-7376 ◽  
Author(s):  
Jenalle L. Eck ◽  
Simon M. Stump ◽  
Camille S. Delavaux ◽  
Scott A. Mangan ◽  
Liza S. Comita
Keyword(s):  
Microbial Community ◽  
Seed Dispersal ◽  
Plant Species ◽  
Plant Community ◽  
Plant Communities ◽  
Soil Microbial Community ◽  
Soil Microbes ◽  
Wild Plant ◽  
Soil Microbial ◽  
Species Specific

Microbes are thought to maintain diversity in plant communities by specializing on particular species, but it is not known whether microbes that specialize within species (i.e., on genotypes) affect diversity or dynamics in plant communities. Here we show that soil microbes can specialize at the within-population level in a wild plant species, and that such specialization could promote species diversity and seed dispersal in plant communities. In a shadehouse experiment in Panama, we found that seedlings of the native tree species, Virola surinamensis (Myristicaceae), had reduced performance in the soil microbial community of their maternal tree compared with in the soil microbial community of a nonmaternal tree from the same population. Performance differences were unrelated to soil nutrients or to colonization by mycorrhizal fungi, suggesting that highly specialized pathogens were the mechanism reducing seedling performance in maternal soils. We then constructed a simulation model to explore the ecological and evolutionary consequences of genotype-specific pathogens in multispecies plant communities. Model results indicated that genotype-specific pathogens promote plant species coexistence—albeit less strongly than species-specific pathogens—and are most effective at maintaining species richness when genetic diversity is relatively low. Simulations also revealed that genotype-specific pathogens select for increased seed dispersal relative to species-specific pathogens, potentially helping to create seed dispersal landscapes that allow pathogens to more effectively promote diversity. Combined, our results reveal that soil microbes can specialize within wild plant populations, affecting seedling performance near conspecific adults and influencing plant community dynamics on ecological and evolutionary time scales.

scholarly journals Shifts in soil and plant functional diversity along an altitudinal gradient in the French Alps

2021 ◽  
Vol 14 (1) ◽  
Author(s):  
Alexia Stokes ◽  
Guillermo Angeles ◽  
Fabien Anthelme ◽  
Eduardo Aranda-Delgado ◽  
Isabelle Barois ◽  
...  
Keyword(s):  
Plant Community ◽  
Functional Diversity ◽  
Plant Communities ◽  
Species Abundance ◽  
Chemical Properties ◽  
Water Infiltration ◽  
Temperate Climate ◽  
Biophysical Properties ◽  
Tropical Zone ◽  
Soil Microbial

Abstract Objectives Altitude integrates changes in environmental conditions that determine shifts in vegetation, including temperature, precipitation, solar radiation and edaphogenetic processes. In turn, vegetation alters soil biophysical properties through litter input, root growth, microbial and macrofaunal interactions. The belowground traits of plant communities modify soil processes in different ways, but it is not known how root traits influence soil biota at the community level. We collected data to investigate how elevation affects belowground community traits and soil microbial and faunal communities. This dataset comprises data from a temperate climate in France and a twin study was performed in a tropical zone in Mexico. Data description The paper describes soil physical and chemical properties, climatic variables, plant community composition and species abundance, plant community traits, soil microbial functional diversity and macrofaunal abundance and diversity. Data are provided for six elevations (1400–2400 m) ranging from montane forest to alpine prairie. We focused on soil biophysical properties beneath three dominant plant species that structure local vegetation. These data are useful for understanding how shifts in vegetation communities affect belowground processes, such as water infiltration, soil aggregation and carbon storage. Data will also help researchers understand how plant communities adjust to a changing climate/environment.

scholarly journals Phytosociological surveys: tools for weed science?

2013 ◽  
Vol 31 (2) ◽  
pp. 469-482 ◽  
Author(s):  
G. Concenço ◽  
M. Tomazi ◽  
I.V.T. Correia ◽  
S.A. Santos ◽  
L. Galon
Keyword(s):  
Cluster Analysis ◽  
Plant Species ◽  
Plant Community ◽  
Plant Communities ◽  
Distinct Group ◽  
Weed Science ◽  
Comprehensive Overview ◽  
Ecological Evaluation ◽  
Natural Plant ◽  
Ecological Basis

In simple terms, a phytosociological survey is a group of ecological evaluation methods whose aim is to provide a comprehensive overview of both the composition and distribution of plant species in a given plant community. To understand the applicability of phytosociological surveys for weed science, as well as their validity, their ecological basis should be understood and the most suitable ones need to be chosen, because cultivated fields present a relatively distinct group of selecting factors when compared to natural plant communities. For weed science, the following sequence of steps is proposed as the most suitable: (1) overall infestation; (2) phytosociological tables/graphs; (3) intra-characterization by diversity; (4) inter-characterization and grouping by cluster analysis. A summary of methods is established in order to assist Weed Science researchers through their steps into the realm of phytosociology.

scholarly journals Plant Taxonomic Diversity Better Explains Soil Fungal and Bacterial Diversity than Functional Diversity in Restored Forest Ecosystems

Plants ◽  
2019 ◽  
Vol 8 (11) ◽  
pp. 479 ◽  
Author(s):  
Hanif ◽  
Guo ◽  
Moniruzzaman ◽  
He ◽  
Yu ◽  
...  
Keyword(s):  
Species Richness ◽  
Microbial Diversity ◽  
Soil Properties ◽  
Bacterial Diversity ◽  
Functional Diversity ◽  
Forest Ecosystems ◽  
Taxonomic Diversity ◽  
Soil Microbial Diversity ◽  
Soil Microbial ◽  
Bacterial Richness

Plant attributes have direct and indirect effects on soil microbes via plant inputs and plant-mediated soil changes. However, whether plant taxonomic and functional diversities can explain the soil microbial diversity of restored forest ecosystems remains elusive. Here, we tested the linkage between plant attributes and soil microbial communities in four restored forests (Acacia species, Eucalyptus species, mixed coniferous species, mixed native species). The trait-based approaches were applied for plant properties and high-throughput Illumina sequencing was applied for fungal and bacterial diversity. The total number of soil microbial operational taxonomic units (OTUs) varied among the four forests. The highest richness of fungal OTUs was found in the Acacia forest. However, bacterial OTUs were highest in the Eucalyptus forest. Species richness was positively and significantly related to fungal and bacterial richness. Plant taxonomic diversity (species richness and species diversity) explained more of the soil microbial diversity than the functional diversity and soil properties. Prediction of fungal richness was better than that of bacterial richness. In addition, root traits explained more variation than the leaf traits. Overall, plant taxonomic diversity played a more important role than plant functional diversity and soil properties in shaping the soil microbial diversity of the four forests.

scholarly journals Plant Community Analysis along Environmental Gradients in Moist Afromontane Forest of Gerba Dima, South-western Ethiopia

2020 ◽  
Author(s):  
Abyot Dibaba Hundie ◽  
Teshome Soromessa Urgessa ◽  
Bikila Warkineh Dullo
Keyword(s):  
Cluster Analysis ◽  
Species Diversity ◽  
Plant Species ◽  
Plant Community ◽  
Plant Communities ◽  
Environmental Gradients ◽  
Floristic Composition ◽  
Regional Government ◽  
Community Types ◽  
Western Ethiopia

Abstract Background This study was carried out in Gerba Dima Forest, South-Western Ethiopia, to determine the floristic composition, species diversity and community types along environmental gradients. Ninety sample plots having a size of 25 × 25 m (625 m2) were laid by employing stratified random sampling. Nested plots were used to sample plants of different sizes and different environmental variables. All woody plant species with Diameter at breast height (DBH) ≥ 2.5 cm and height ≥ 1.5 m were recorded in 25 m X 25 m plots. Within the major plots, five 3 m x 3 m subplots (9 m2) was used to collect shrubs with dbh < 2.5 cm and > 1.5 m height. Within each 9 m2subplots, two 1 m2 subplots were used to collect data on the species and abundance of herbaceous plants. Hierarchical (agglomerative) cluster analysis was performed using the free statistical software R version 3.6.1 using package cluster to classify the vegetation into plant community types. Redundancy Analysis (RDA) ordination was used in describing the pattern of plant communities along an environmental gradient. Result One hundred and eighty plant species belonging to 145 genera, 69 families and comprising of 15 endemic species were recorded. Cluster analysis resulted in five different plant communities and this result was supported by the ordination result. RDA result showed altitude was the main environmental variable in determining the plant communities. The ANOVA test indicated that the five community types differ significantly from each other with regard to EC and K. Conclusions The studied forest can play a significant role in biodiversity conservation since it harbours high species diversity and richness. Thus, all Stakeholders including Oromia Forest and wildlife enterprise (OFWE) and the regional government should work to designate the forest as a biosphere reserve and being registered under UNESCO.

scholarly journals The invasive herb Lupinus polyphyllus can reduce plant species richness independently of local invasion age

2021 ◽  
Author(s):  
Marju Prass ◽  
Satu Ramula ◽  
Miia Jauni ◽  
Heikki Setälä ◽  
D. Johan Kotze
Keyword(s):  
Species Richness ◽  
Plant Species ◽  
Plant Community ◽  
Plant Communities ◽  
Vascular Plant ◽  
Plant Species Richness ◽  
Ecological Impacts ◽  
Plant Community Composition ◽  
Lupinus Polyphyllus ◽  
Local Invasion

AbstractThe ecological impacts of invasive species may change or accumulate with time since local invasion, potentially inducing further changes in communities and the abiotic environment. Yet, time since invasion is rarely considered when investigating the ecological impacts of invasive non-native species. To examine the effect of time since invasion on the ecological impacts of Lupinus polyphyllus, a perennial nitrogen-fixing herb, we surveyed vascular plant communities in the presence and absence of L. polyphyllus in young, intermediate, and old semi-natural grassland sites (ca. 5, 10, 15 years representing both time since lupine invasion and plant community age). We analyzed vascular plant community composition, vascular plant species richness, and the cover of various ecological plant groups and L. polyphyllus. In contrast to our hypotheses, we found no change in the mean cover of L. polyphyllus (about 35%) with time since local invasion, and an ordination did not suggest marked changes in plant community composition. L. polyphyllus was associated with lower species richness in invaded plant communities but this effect did not change with time since invasion. Invaded plant communities were also associated with lower occurrence of generalist, oligotrophic (low-nutrient-adapted) and copiotrophic (nutrient-demanding) species but no temporal dynamics were detected. We conclude that even the intermediate cover of L. polyphyllus can reduce plant species richness, but the ecological impact caused by this invader might not dramatically change or accumulate with time since invasion.

Drought intensity effects on grassland plant communities and soil microbial community function

2021 ◽  
Author(s):  
Natalie Oram ◽  
Johannes Ingrisch ◽  
Gerd Gleixner ◽  
Nadine Praeg ◽  
Paul Illmer ◽  
...  
Keyword(s):  
Microbial Community ◽  
Plant Community ◽  
Plant Communities ◽  
Soil Microbial Community ◽  
Extracellular Enzyme ◽  
Community Recovery ◽  
Community Functioning ◽  
Drought Intensity ◽  
Soil Microbial ◽  
Acquisition Strategies

&lt;p&gt;Plant and soil communities are intimately connected. Plants shape soil microbial community composition through their resource acquisition strategies and via root carbon (C) inputs, which has cascading effects on biogeochemical cycles. Drought has been shown to disrupt the connection between plants and soil microorganisms. However, the effects of drought intensity on soil microbial community functioning, including the uptake of recent plant-derived C, are largely unknown. Here, we determined how two plant communities with contrasting resource acquisition strategies (acquisitive versus conservative) responded to a gradient of drought (control, and eight drought intensities). Using a &lt;sup&gt;13&lt;/sup&gt;C pulse labelling approach, we tracked C allocated from plants to soil and its uptake by the microbial community. We measured potential extracellular enzyme activity as a proxy of microbial community functioning. We hypothesized that (1) drought responses are non-linear, and (2) acquisitive plant communities have lower drought resistance but recover faster than conservative plant communities, which is reflected in lower &lt;sup&gt;13&lt;/sup&gt;C transfer and reduced microbial functioning during drought and increases after drought. In general, we found that the responses we measured were non-linearly related to drought intensity. After three weeks of drought, drought intensity decreased aboveground net primary productivity (ANPP) of both plant communities. Soil extractable organic &lt;sup&gt;13&lt;/sup&gt;C decreased with increasing drought intensity, indicating that less recently assimilated C was allocated to root exudation. Although microbial biomass remained stable over the drought intensity gradient, &lt;sup&gt;13&lt;/sup&gt;C uptake into microbial biomass decreased at peak drought, and was lower in the conservative vs. acquisitive plant community at mild drought levels. Potential enzyme activity of &amp;#946;-1,4-glucosidase, involved in cellulose breakdown, and&amp;#160; &amp;#946;-N-acetyl-glucosaminidase, involved in chitin breakdown, decreased with increasing drought intensity. Urease activity was higher in conservative than acquisitive plant communities exposed to drought. Seven days after re-wetting, we found that microbial uptake of &lt;sup&gt;13&lt;/sup&gt;C increased along the drought gradient and was higher than the control in communities previously subjected to high drought intensities. This fast microbial recovery could affect nutrient mobilisation, which could underlie longer-term plant community recovery. Two months after re-wetting, we indeed found that plant communities that had previously experienced high drought intensity (&gt; 75% soil water deficit) had higher ANPP than the control. We conclude that drought intensity has significant non-linear effects on microbial uptake of recent plant C and on potential extracellular enzyme activities both during drought and recovery, with consequences for plant community recovery dynamics. &amp;#160;&lt;/p&gt;

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