scholarly journals RooTrak: Automated Recovery of Three-Dimensional Plant Root Architecture in Soil from X-Ray Microcomputed Tomography Images Using Visual Tracking

2011 ◽  
Vol 158 (2) ◽  
pp. 561-569 ◽  
Author(s):  
Stefan Mairhofer ◽  
Susan Zappala ◽  
Saoirse R. Tracy ◽  
Craig Sturrock ◽  
Malcolm Bennett ◽  
...  
Minerals ◽  
2019 ◽  
Vol 9 (3) ◽  
pp. 183 ◽  
Author(s):  
Pratama Istiadi Guntoro ◽  
Yousef Ghorbani ◽  
Pierre-Henri Koch ◽  
Jan Rosenkranz

The main advantage of X-ray microcomputed tomography (µCT) as a non-destructive imaging tool lies in its ability to analyze the three-dimensional (3D) interior of a sample, therefore eliminating the stereological error exhibited in conventional two-dimensional (2D) image analysis. Coupled with the correct data analysis methods, µCT allows extraction of textural and mineralogical information from ore samples. This study provides a comprehensive overview on the available and potentially useful data analysis methods for processing 3D datasets acquired with laboratory µCT systems. Our study indicates that there is a rapid development of new techniques and algorithms capable of processing µCT datasets, but application of such techniques is often sample-specific. Several methods that have been successfully implemented for other similar materials (soils, aggregates, rocks) were also found to have the potential to be applied in mineral characterization. The main challenge in establishing a µCT system as a mineral characterization tool lies in the computational expenses of processing the large 3D dataset. Additionally, since most of the µCT dataset is based on the attenuation of the minerals, the presence of minerals with similar attenuations limits the capability of µCT in mineral segmentation. Further development on the data processing workflow is needed to accelerate the breakthrough of µCT as an analytical tool in mineral characterization.


2017 ◽  
Vol 52 (17) ◽  
pp. 10186-10197 ◽  
Author(s):  
M. E. Kartal ◽  
L. H. Dugdale ◽  
J. J. Harrigan ◽  
M. A. Siddiq ◽  
D. Pokrajac ◽  
...  

1999 ◽  
Vol 17 (1) ◽  
pp. 37-44 ◽  
Author(s):  
A. Barbier ◽  
C. Martel ◽  
M. C. de Vernejoul ◽  
F. Tirode ◽  
M. Nys ◽  
...  

2007 ◽  
Vol 101 (8) ◽  
pp. 1281-1293 ◽  
Author(s):  
F. Danjon ◽  
D. H. Barker ◽  
M. Drexhage ◽  
A. Stokes

2016 ◽  
Vol 47 (2) ◽  
pp. 263-274 ◽  
Author(s):  
Boris Lazarević ◽  
Craig J. Sturrock ◽  
Milan Poljak ◽  
Sacha J. Mooney

2011 ◽  
Vol 17 (23-24) ◽  
pp. 3077-3084 ◽  
Author(s):  
Qiang Fu ◽  
Wenhai Huang ◽  
Weitao Jia ◽  
Mohamed N. Rahaman ◽  
Xin Liu ◽  
...  

2004 ◽  
Vol 3 (3) ◽  
pp. 1017-1030 ◽  
Author(s):  
Daizo Tsutsumi ◽  
Ken'ichiro Kosugi ◽  
Takahisa Mizuyama

2015 ◽  
Vol 10 (3) ◽  
pp. 031009 ◽  
Author(s):  
Maurizio Santini ◽  
Manfredo Guilizzoni ◽  
Massimo Lorenzi ◽  
Plamen Atanassov ◽  
Enrico Marsili ◽  
...  

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