Longitudinal Chinese Population Structural Fetal Brain Atlases Construction: toward precise fetal brain segmentation

Author(s):  
Jiangjie Wu ◽  
Boliang Yu ◽  
Lihui Wang ◽  
Qing Yang ◽  
Yuyao Zhang
NeuroImage ◽  
2021 ◽  
pp. 118412
Author(s):  
Jiangjie Wu ◽  
Taotao Sun ◽  
Boliang Yu ◽  
Zhenghao Li ◽  
Qing Wu ◽  
...  

NeuroImage ◽  
2014 ◽  
Vol 101 ◽  
pp. 633-643 ◽  
Author(s):  
K. Keraudren ◽  
M. Kuklisova-Murgasova ◽  
V. Kyriakopoulou ◽  
C. Malamateniou ◽  
M.A. Rutherford ◽  
...  

2021 ◽  
Vol 8 (1) ◽  
Author(s):  
Kelly Payette ◽  
Priscille de Dumast ◽  
Hamza Kebiri ◽  
Ivan Ezhov ◽  
Johannes C. Paetzold ◽  
...  

AbstractIt is critical to quantitatively analyse the developing human fetal brain in order to fully understand neurodevelopment in both normal fetuses and those with congenital disorders. To facilitate this analysis, automatic multi-tissue fetal brain segmentation algorithms are needed, which in turn requires open datasets of segmented fetal brains. Here we introduce a publicly available dataset of 50 manually segmented pathological and non-pathological fetal magnetic resonance brain volume reconstructions across a range of gestational ages (20 to 33 weeks) into 7 different tissue categories (external cerebrospinal fluid, grey matter, white matter, ventricles, cerebellum, deep grey matter, brainstem/spinal cord). In addition, we quantitatively evaluate the accuracy of several automatic multi-tissue segmentation algorithms of the developing human fetal brain. Four research groups participated, submitting a total of 10 algorithms, demonstrating the benefits the dataset for the development of automatic algorithms.


Author(s):  
Andrik Rampun ◽  
Deborah Jarvis ◽  
Paul Griffiths ◽  
Paul Armitage

2021 ◽  
pp. 584-593
Author(s):  
Xukun Zhang ◽  
Zhiming Cui ◽  
Changan Chen ◽  
Jie Wei ◽  
Jingjiao Lou ◽  
...  

2020 ◽  
Author(s):  
Haotian Li ◽  
Guohui Yan ◽  
Wanrong Luo ◽  
Tintin Liu ◽  
Yan Wang ◽  
...  

AbstractFetal brain MRI has become an important tool for in utero assessment of brain development and disorders. However, quantitative analysis of fetal brain MRI remains difficult, partially due to the limited tools for automated preprocessing and the lack of normative brain templates. In this paper, we proposed an automated pipeline for fetal brain extraction, super-resolution reconstruction, and fetal brain atlasing to quantitatively map in utero fetal brain development during mid-to-late gestation in a Chinese population. First, we designed a U-net convolutional neural network for automated fetal brain extraction, which achieved an average accuracy of 97%. We then generated a developing fetal brain atlas, using an iterative linear and nonlinear registration approach. Based on the 4D spatiotemporal atlas, we quantified the morphological development of the fetal brain between 23-36 weeks of gestation. The proposed pipeline enabled the fully-automated volumetric reconstruction for clinically available fetal brain MRI data, and the 4D fetal brain atlas provided normative templates for quantitative analysis of potential fetal brain abnormalities, especially in the Chinese population.


Sign in / Sign up

Export Citation Format

Share Document