Revealing the community and metabolic potential of active methanotrophs by targeted metagenomics in the Zoige wetland of the Tibetan Plateau

Author(s):  
Juanli Yun ◽  
Andrew T. Crombie ◽  
Muhammad Farhan Ul Haque ◽  
Yuanfeng Cai ◽  
Xiaowei Zheng ◽  
...  
2008 ◽  
Vol 74 (19) ◽  
pp. 6114-6120 ◽  
Author(s):  
Guishan Zhang ◽  
Na Jiang ◽  
Xiaoli Liu ◽  
Xiuzhu Dong

ABSTRACT The Zoige wetland of the Tibetan plateau is at permanent low temperatures and is a methane emission heartland of the plateau; however, cold-adaptive methanogens in the soil are poorly understood. In this study, a variety of methanogenic enrichments at 15�C and 30�C were obtained from the wetland soil. It was demonstrated that hydrogenotrophic methanogenesis was the most efficient type at 30�C, while methanol supported the highest methanogenesis rate at 15�C. Moreover, methanol was the only substrate to produce methane more efficiently at 15�C than at 30�C. A novel psychrophilic methanogen, strain R15, was isolated from the methanol enrichment at 15�C. Phylogenetic analysis placed strain R15 within the genus Methanolobus, loosely clustered with Methanolobus taylorii (96.7% 16S rRNA similarity). R15 produced methane from methanol, trimethylamine, and methyl sulfide and differed from other Methanolobus species by growing and producing methane optimally at 18�C (specific growth rate of 0.063 � 0.001 h−1) and even at 0�C. Based on these characteristics, R15 was proposed to be a new species and named “Methanolobus psychrophilus” sp. nov. The Km and V max of R15 for methanol conversion were determined to be 87.5 � 0.4 μM and 0.39 � 0.04 mM h−1 at 18�C, respectively, indicating a high affinity and conversion efficiency for methanol. The proportion of R15 in the soil was determined by quantitative PCR, and it accounted for 17.2% � 2.1% of the total archaea, enumerated as 107 per gram of soil; the proportion was increased to 42.4% � 2.3% in the methanol enrichment at 15�C. This study suggests that the psychrophilic methanogens in the Zoige wetland are likely to be methylotrophic and to play a role in methane emission of the wetland.


2017 ◽  
Vol 37 (19) ◽  
Author(s):  
王蓥燕 WANG Yingyan ◽  
卢圣鄂 LU Sheng'e ◽  
陈小敏 CHEN Xiaomin ◽  
李跃飞 LI Yuefei ◽  
辜运富 GU Yunfu

2011 ◽  
Vol 63 (4) ◽  
pp. 835-843 ◽  
Author(s):  
Juanli Yun ◽  
Guoqiang Zhuang ◽  
Anzhou Ma ◽  
Hongguang Guo ◽  
Yanfen Wang ◽  
...  

2021 ◽  
Vol 10 (17) ◽  
Author(s):  
Juanli Yun ◽  
Wenbin Du

Wetlands in the Tibetan Plateau play a crucial role in global carbon cycling. Here, we report the metagenome-assembled genomes (MAGs) of two hydrogen-dependent methanogens from the Zoige wetland of the Tibetan Plateau. The novel species belong to Methanomassiliicoccales , the seventh euryarchaeal methanogenic order.


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