Pollination is an essential prerequisite for the production of many fruit and seed crops, including apple. In apple, successful fertilization requires pollen transfer to the stigma, pollen germination, and successful pollen tube growth resulting in fruit set. Precise selection of the most effective pollinizers for commercial orchards is not possible however, until these processes are more fully understood. The present study was undertaken to compare pollinizers in terms of pollen tube growth and fruit set. On trees of ‘Honeycrisp’, ‘Fuji’, and ‘Gala’ from which bees were excluded, flowers were hand-pollinated using pollen collected from crabapple (‘Ralph Shay’ or Malus floribunda), ‘Delicious’ and ‘Golden Delicious’. Flowers were harvested at one, two, three, and four days after pollination (DAP). Pollen source had a significant influence on pollen germination on the stigmatic surface, number of pollen tubes penetrating the stigma, distance of pollen tube growth down the style, and pollen tubes reaching the base of the style. In ‘Honeycrisp’ and ‘Gala’, ‘Golden Delicious’ pollen grew the fastest, followed by ‘Delicious’ and crabapple. Neither ‘Ralph Shay’ nor Malus floribunda were effective pollinizers for ‘Honeycrisp’ and resulted in low fruit set suggesting incompatibility may be involved. However, both these crabapples were effective pollinizers for ‘Fuji’ and ‘Gala’. These results indicate that pollen source can have a tremendous impact on pollen tube growth and fruit set. The physiological basis for these effects is not clear, but implications for pollinizer selection are obvious.