Burrowing crabs and physical factors hasten marsh recovery at panne edges

Salt marsh loss is projected to increase as sea-level rise accelerates with global climate change. Salt marsh loss occurs along both lateral creek and channel edges and in the marsh interior, when pannes expand and coalesce. Often, edge loss is attributed to erosive processes whereas dieback in the marsh interior is linked to excessive inundation or deposition of wrack, but remains poorly understood. We conducted a two-year field investigation in a central California estuary to identify key factors associated with panne contraction or expansion. Our study explored how an abundant burrowing crab, shown to have strong negative effects on marsh biomass near creek edges, affects panne dynamics. We also explored which physical panne attributes best predicted their dynamics. To our knowledge, ours is the first study of panne dynamics in a California marsh, despite how ubiquitous pannes are as a feature of marshes in the region and how often extensive marsh dieback occurs via panne expansion. Overall, we found that pannes contracted during the study period, but with variable rates of marsh recovery across pannes. Our model incorporating both physical and biological factors explained 86% of the variation in panne contraction. The model revealed a positive effect of crab activity, sediment accretion, and a composite of depth and elevation on panne contraction, and a negative effect of panne size and distance to nearest panne. The positive crab effects detected in pannes contrast with negative effects we detected near creek edges in a previous study, highlighting the context-dependence of top-down and bioturbation effects in marshes. As global change continues and the magnitude and frequency of disturbances increases, understanding the dynamics of marsh loss in the marsh interior as well as creek banks will be critical for the management of these coastal habitats.

Salmonella enterica Serovar Diversity, Distribution, and Prevalence in Public Access Waters from a Central California Coastal Leafy Green Growing Region during 2011 - 2016

Prevalence and serovar diversity of Salmonella enterica was measured during a five-year survey of surface waters in a 500 mi^2 agricultural region of the Central California Coast. Rivers, streams, lakes, and ponds were sampled bimonthly resulting in 2,979 samples. Overall prevalence was 56.4% with higher levels detected in Spring than in Fall. Small, but significant, differences in prevalence were detected based on sample locations. Detection of Salmonella was correlated positively with both significant rain events and, in some environments, levels of generic Escherichia coli . Analysis of 1,936 isolates revealed significant serovar diversity, with 91 different serovars detected. The most common isolated serovars were S. enterica subsp. enterica serovars I 6,8:d:- (406 isolates, 21.0%, and potentially monophasic Salmonella Muenchen), Give (334 isolates, 17.3%), Muenchen (158 isolates, 8.2%), Typhimurium (227 isolates, 11.7%), Oranienburg (106 isolates, 5.5%), and Montevideo (78 isolates, 4%). Sixteen of the 24 most common serovars detected in the region are among the serovars reported to cause the most human salmonellosis in the United States. Some of the serovars were associated with location and seasonal bias. Analysis of Xba I Pulsed Field Gel Electrophoresis (PFGE) patterns of strains of serovars Typhimurium, Oranienburg, and Montevideo showed significant intra-serovar diversity. PFGE pulsotypes were identified in the region for multiple years of the survey, indicating persistence or regular re-introduction to the region. Importance Non-typhoidal Salmonella is the among the leading causes of bacterial foodborne illness and increasing numbers of outbreaks and recalls are due to contaminated produce. High prevalence and 91 different serovars were detected in this leafy green growing region. Seventeen serovars that cause most of the human salmonellosis in the United States were detected, with 16 of those serovars detected in multiple locations and multiple years of the 5-year survey. Understanding the widespread prevalence and diversity of Salmonella in the region will assist in promoting food safety practices and intervention methods for growers and regulators.

Influence of a Post-dam Sediment Pulse and Post-fire Debris Flows on Steelhead Spawning Gravel in the Carmel River, California

Spawning gravel scarcity is a limiting factor for successful recovery of federally-threatened anadromous fish like steelhead of central California. A BACI-experimental design using bed particle counts from 2013 through 2021 shows that spawning-sized gravel (32–90 mm) diminished downstream of the former San Clemente Dam site in 2017, following dam removal in 2015. High flows in 2017 transported a pulse of sand and fine-gravel that filled pools and runs throughout the river below the dam. The bed material in the 3 km closest to the dam remained too coarse for redds in riffles and too fine in pools and runs. Time-series bathymetric data of the Los Padres Dam reservoir located in the upper Carmel watershed shows that nearly all bed material (including spawning gravel) in the upper Carmel River watershed was recruited during wet winters that immediately followed expansive wildfires. We studied that effect in detail following the Carmel Fire of August 2020, which preconditioned the slopes adjacent to the Carmel River for debris flows. Our analysis of several fire-mediated debris flows in 2021 show that they contained virtually no mud and held approximately 45% spawning-sized gravel. Although the debris flows contained abundant spawning gravel, and several flow snouts terminated in the Carmel River, the material was dispersed downstream rather than forming bars and patches that could be used for steelhead nest building. The generally small volume of material in the flows relative to the size of the river channel and impediments to debris flow runout limited the contribution of spawning-size gravel to the river.

Depth dependence of climatic controls on soil microbial community activity and composition

Subsoil microbiomes play important roles in soil carbon and nutrient cycling, yet our understanding of the controls on subsoil microbial communities is limited. Here, we investigated the direct (mean annual temperature and precipitation) and indirect (soil chemistry) effects of climate on microbiome composition and extracellular enzyme activity throughout the soil profile across two elevation-bioclimatic gradients in central California, USA. We found that microbiome composition changes and activity decreases with depth. Across these sites, the direct influence of climate on microbiome composition and activity was relatively lower at depth. Furthermore, we found that certain microbial taxa change in relative abundance over large temperature and precipitation gradients only in specific soil horizons, highlighting the depth dependence of the climatic controls on microbiome composition. Our finding that the direct impacts of climate are muted at depth suggests that deep soil microbiomes may lag in their acclimation to new temperatures with a changing climate.

Internal Bore Evolution Across the Shelf Near Pt. Sal CA interpreted as a Gravity Current

Off the central California coast near Pt. Sal, a large amplitude internal bore was observed for 20 h over 10 km cross-shore, or 100 m to 10 m water depth (D), and 30 km alongcoast by remote sensing, 39 in situ moorings, ship surveys, and drifters. The bore is associated with steep isotherm displacements representing a significant fraction of D. Observations were used to estimate bore arrival time tB, thickness h, and bore and non-bore (ambient) temperature difference ΔT, leading to reduced gravity g′. Bore speeds c, estimated from mapped tB, varied from 0.25 m s−1 to 0.1 m s−1 from D = 50 m to D = 10 m. The h varied from 5 to 35 m, generally decreased with D, and varied regionally alongisobath. The bore ΔT varied from 0.75 to 2.15 °C. Bore evolution was interpreted from the perspective of a two-layer gravity current. Gravity current speeds U, estimated from the local bore h and g− compared well to observed bore speeds throughout its cross-shore propagation. Linear internal wave speeds based on various stratification estimates result in larger errors. On average bore thickness h = D/2, with regional variation, suggesting energy saturation. From 50–10 m depths, observed bore speeds compared well to saturated gravity current speeds and energetics that depend only on water depth and shelf-wide mean g′. This suggests that this internal bore is the internal wave analogue to a saturated surfzone surface gravity bore. Alongcoast variations in pre-bore stratification explain variations in bore properties. Near Pt. Sal, bore Doppler shifting by barotropic currents is observed.

LATE BREEDING-SEASON DEFINITIVE PRE-BASIC MOLT BY MALES, AND LATE BREEDING SEASON BROOD CARE BY FEMALES, IN CENTRAL CALIFORNIA WILSON'S WARBLERS

I made late breeding season (after 1 July) observations of a central California population of Wilson’s Warbler, Cardellina pusilla, over nine breeding seasons. I sighted males in definitive prebasic molt from 4 July in 2007 through 1 September in 1999. Possibly all territorial males molted on their breeding territories, and molt lasted a maximum of 46 days. Following prebasic molt, territorial males engaged in subdued “post molt singing,” which lasted 14 days in one male, but usually no more than seven days, and was last heard on 6 September in 1999. I sighted no female in definitive prebasic molt, nor in bright basic plumage, during the study. Of 12 color-banded females sighted after 22 July, I confirmed 11 had been in late breeding season uniparental brood care. Possibly all resident females not engaged in late uniparental brood care vacated their breeding territories earlier, and before resident males. They presumably underwent prebasic molt at later times and locations not known. Remaining late nesting females must have molted much later than resident males, and likely later than early departing resident females, and at unknown locations. I last sighted uniparental brood tending females still in dull alternate plumage on 26 and 29 August respectively, whereas some males had completed prebasic molt by 13 August. Three unique study findings are the occurrence of male post molt singing, a male/female difference in location of prebasic molt, and a likely dichotomy of prebasic molt timing between females leaving their breeding grounds early, and those remaining in uniparental brood care.

Effective Instructional Leadership Practices in High Performing Elementary Schools

The purpose of this study was to investigate the connection between principals’ instructional practices and student achievement. A phenomenological case study examined 13 Title I elementary schools in central California that exhibited a) a high percentage of students from poverty, b) higher than average state assessment results, and c) principals that remained in their schools for 3 years or more during the same time period. The study analyzed instructional leadership practices (ILP) and the monitoring tools used by the principals and its effect on student achievement. The impact of this study provides a model for ILP of principals that can be incorporated into their daily habits that provide opportunities for instructional changes that can lead to increased student achievement.

Photovoltaic solar farms in California: can we have renewable electricity and our species, too?

Photovoltaic solar power generating facilities are proliferating rapidly in California and elsewhere. While this trend is welcomed for many reasons (e.g., reducing greenhouse gas emissions), these facilities also can have profound environmental impacts, particularly to local species populations. These impacts become more significant when species of conservation concern are affected. In the San Joaquin Desert region in central California, a number of conservation measures have been routinely implemented on solar facilities, and these measures have facilitated continued use of the facilities by a number of species of conservation concern. Some of the more significant measures include permeable security fences, vegetation management, movement corridors, avoiding critical features such as dens and burrows, and vehicle speed limits. Detailed studies have been conducted on San Joaquin kit foxes (Vulpes macrotis mutica) using solar facilities in the San Joaquin Desert. Demographic and ecological attributes of foxes are similar between foxes using the facilities and foxes on nearby reference sites, and values for foxes on solar sites are within the ranges of values for foxes reported from sites within core population areas. Facilitated by the conservation measures, kit foxes are using at least six facilities in the San Joaquin Desert as are a variety of other species of conservation concern. This successful model also potentially could be adapted to other ecosystems and applied to facilities in regions outside of the San Joaquin Desert, such as the Mojave Desert. Determining whether species in other regions can use photovoltaic solar facilities and identifying the most efficacious conservation measures will require time and testing, and these efforts would benefit from collaborative efforts among landowners, solar developers, natural resources agencies, researchers, and others. The San Joaquin Desert facilities and a recent demonstration facility in the Mojave Desert provide strong evidence that solar facilities can be constructed and operated in a manner that also accommodates continued use of the facilities by some species of conservation concern.