scholarly journals A family of null models to distinguish between environmental filtering and biotic interactions in functional diversity patterns

2013 ◽  
Vol 24 (5) ◽  
pp. 853-864 ◽  
Author(s):  
L. Chalmandrier ◽  
T. Münkemüller ◽  
L. Gallien ◽  
F. de Bello ◽  
F. Mazel ◽  
...  
2021 ◽  
Author(s):  
Kenny Helsen ◽  
Yeng-Chen Shen ◽  
Tsung-Yi Lin ◽  
Chien-Fan Chen ◽  
Chu-Mei Huang ◽  
...  

While the relative importance of climate filtering is known to be higher for woody species assemblages than herbaceous assemblage, it remains largely unexplored whether this pattern is also reflected between the woody overstory and herbaceous understory of forests. While climatic variation will be more buffered by the tree layer, the understory might also respond more to small-scale soil variation, next to experiencing additional environmental filtering due to the overstory's effects on light and litter quality. For (sub)tropical forests, the understory often contains a high proportion of fern and lycophyte species, for which environmental filtering is even less well understood. We explored the proportional importance of climate proxies and soil variation on the species, functional trait and (functional) diversity patterns of both the forest overstory and fern and lycophyte understory along an elevational gradient from 850 to 2100 m a.s.l. in northern Taiwan. We selected nine functional traits expected to respond to soil nutrient or climatic stress for this study and furthermore verified whether they were positively related across vegetation layers, as expected when driven by similar environmental drivers. We found that climate was a proportionally more important predictor than soil for the species composition of both vegetation layers and trait composition of the understory. The stronger than expected proportional effect of climate for the understory was likely due to fern and lycophytes' higher vulnerability to drought, while the high importance of soil for the overstory seemed driven by deciduous species. The environmental drivers affected different response traits in both vegetation layers, however, which together with additional overstory effects on understory traits, resulted in a strong disconnection of community-level trait values across layers. Interestingly, species and functional diversity patterns could be almost exclusively explained by climate effects for both vegetational layers, with the exception of understory species richness. This study illustrates that environmental filtering can differentially affect species, trait and diversity patterns and can be highly divergent for forest overstory and understory vegetation, and should consequently not be extrapolated across vegetation layers or between composition and diversity patterns.


2021 ◽  
Author(s):  
Amanda S Gallinat ◽  
William D Pearse

The distribution of taxonomic, phylogenetic, and functional biodiversity results from a combination of abiotic and biotic drivers which are scale dependent. Parsing the relative influence of these drivers is critical to understanding the processes underlying species assembly and generating predictions of biodiversity across taxonomic groups and for novel sites. However, doing so requires data that capture a spatial extent large enough to reflect broad-scale dynamics such as speciation and biogeography, and a spatial grain fine enough to detect local-scale dynamics like environmental filtering and biotic interactions. We used species inventories of vascular plants, birds, and mammals collected by the U.S. National Ecological Observatory Network (NEON) at 38 terrestrial field sites, to explore the processes underlying taxonomic, phylogenetic, and functional diversity and turnover. We found that, for both species richness (alpha-diversity) and turnover (beta-diversity), taxonomic, phylogenetic, and functional diversity are weak proxies for one-another, and thus may capture different species assembly processes. All diversity metrics were best predicted by a combination of abiotic and biotic variables. Taxonomic and phylogenetic richness tended to be higher at warmer, wetter sites, reflecting the role energy inputs play in driving broad-scale diversity. However, plant diversity was negatively correlated with bird phylogenetic and mammal functional diversity, implying trait conservation in plant communities may limit niche availability for consumer species. Equally, turnover in bird and mammal species across sites were associated with plant turnover. That the biodiversity of one taxon is predictive of another across these North American sites, even when controlling for environment, supports a role for the cross-clade biotic environment in driving species assembly.


2017 ◽  
Vol 100 (9) ◽  
pp. 1023-1032 ◽  
Author(s):  
Carlos Alberto Sousa Rodrigues-Filho ◽  
Ronaldo César Gurgel-Lourenço ◽  
Sergio Maia Queiroz Lima ◽  
Edson Fontes de Oliveira ◽  
Jorge Iván Sánchez-Botero

2021 ◽  
Author(s):  
Jose Luis Poveda‐Cuellar ◽  
Edwin Orlando López Delgado ◽  
Pamela Tatiana Zúñiga‐Upegui ◽  
Francisco Antonio Villa Navarro

2021 ◽  
Author(s):  
Michaeline B. N. Albright ◽  
Stilianos Louca ◽  
Daniel E. Winkler ◽  
Kelli L. Feeser ◽  
Sarah-Jane Haig ◽  
...  

AbstractMicrobiome engineering is increasingly being employed as a solution to challenges in health, agriculture, and climate. Often manipulation involves inoculation of new microbes designed to improve function into a preexisting microbial community. Despite, increased efforts in microbiome engineering inoculants frequently fail to establish and/or confer long-lasting modifications on ecosystem function. We posit that one underlying cause of these shortfalls is the failure to consider barriers to organism establishment. This is a key challenge and focus of macroecology research, specifically invasion biology and restoration ecology. We adopt a framework from invasion biology that summarizes establishment barriers in three categories: (1) propagule pressure, (2) environmental filtering, and (3) biotic interactions factors. We suggest that biotic interactions is the most neglected factor in microbiome engineering research, and we recommend a number of actions to accelerate engineering solutions.


2018 ◽  
Vol 34 (1) ◽  
pp. 225-234 ◽  
Author(s):  
Mariana A. Tsianou ◽  
Athanasios S. Kallimanis

PLoS ONE ◽  
2016 ◽  
Vol 11 (6) ◽  
pp. e0157442 ◽  
Author(s):  
Cássio Alencar Nunes ◽  
Rodrigo Fagundes Braga ◽  
José Eugênio Cortes Figueira ◽  
Frederico de Siqueira Neves ◽  
G. Wilson Fernandes

2019 ◽  
Vol 30 (5) ◽  
pp. 973-983 ◽  
Author(s):  
Yi Ding ◽  
Runguo Zang ◽  
Xinghui Lu ◽  
Jihong Huang ◽  
Yue Xu

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