scholarly journals Draft Genome Sequence of the Siderophore-Degrading Soil Bacterium Mesorhizobium loti Strain LU

2018 ◽  
Vol 6 (6) ◽  
pp. e00029-18
Author(s):  
Domenic Castignetti ◽  
Nathaniel Polley ◽  
Catherine Putonti
Keyword(s):  
Genome Size ◽  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Soil Bacterium ◽  
Draft Genome Sequence ◽  
Mesorhizobium Loti ◽  
Deferrioxamine B

ABSTRACTHere, we present the draft genome of Mesorhizobium loti strain LU, a soil bacterium capable of degrading the trihydroxamate siderophore deferrioxamine B to its constituent monohydroxamic acids. Genome size was 6,399,828 bp, with a GC content of 61.5%. This draft genome consists of 35 scaffolds, with an N50 of 389,921 bp.

scholarly journals Draft Genome Sequence of Rummeliibacillus sp. Strain TYF005, a Physiologically Recalcitrant Bacterium with High Ethanol and Salt Tolerance Isolated from Spoilage Vinegar

2019 ◽  
Vol 8 (31) ◽  
Author(s):  
Min Li ◽  
Yao Li ◽  
Xiaojun Fan ◽  
Yuhong Qin ◽  
Yongji He ◽  
...  
Keyword(s):  
Salt Tolerance ◽  
Genome Size ◽  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Thermophilic Bacterium ◽  
Draft Genome Sequence ◽  
Content Type ◽  
High Ethanol

Rummeliibacillus sp. strain TYF005 is a thermophilic bacterium with high ethanol (8% vol/vol) and salt (13% wt/vol) tolerance that was isolated from spoilage vinegar. Here, we report the draft genome sequence of this strain, which has 117 scaffolds with a total genome size of 3.7 Mb and a 34.4% GC content.

scholarly journals Draft Genome Sequence of CO33, a Coffee-Infecting Isolate of Xylella fastidiosa

2015 ◽  
Vol 3 (6) ◽  
Author(s):  
Annalisa Giampetruzzi ◽  
Giuliana Loconsole ◽  
Donato Boscia ◽  
Alessandra Calzolari ◽  
Michela Chiumenti ◽  
...  
Keyword(s):  
Genome Size ◽  
Genome Sequence ◽  
Xylella Fastidiosa ◽  
Draft Genome ◽  
Gc Content ◽  
Northern Italy ◽  
Draft Genome Sequence ◽  
Coffee Plant

The draft genome sequence of Xylella fastidiosa CO33 isolate, retrieved from symptomatic leaves of coffee plant intercepted in northern Italy, is reported. The CO33 genome size is 2,681,926 bp with a GC content of 51.7%.

scholarly journals Draft Genome Sequence of the UV-Resistant Antarctic Bacterium Sphingomonas sp. Strain UV9

2019 ◽  
Vol 8 (7) ◽  
Author(s):  
Juan J. Marizcurrena ◽  
Danilo Morales ◽  
Pablo Smircich ◽  
Susana Castro-Sowinski
Keyword(s):  
Genome Size ◽  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Coding Sequences ◽  
Antarctic Bacterium ◽  
A Genome ◽  
The Antarctic

We report the draft genome sequence of the Antarctic UV-resistant bacterium Sphingomonas sp. strain UV9. The strain has a genome size of 4.25 Mb, a 65.62% GC content, and 3,879 protein-coding sequences.

scholarly journals Draft Genome Sequence of Lactobacillus mulieris UMB7784, Isolated from the Female Urinary Tract

2020 ◽  
Vol 9 (21) ◽  
Author(s):  
Oleksandra Tsibere ◽  
Taylor Miller-Ensminger ◽  
Adelina Voukadinova ◽  
Alan J. Wolfe ◽  
Catherine Putonti
Keyword(s):  
Urinary Tract ◽  
Genome Size ◽  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
A Genome ◽  
Female Bladder ◽  
Female Urinary Tract

ABSTRACT We sequenced the genome of Lactobacillus mulieris UMB7784, isolated from the urinary tract. With a genome size of 1,695,489 bp and a GC content of 34.2%, the draft genome sequence presented here expands our understanding of lactobacilli in the female bladder.

scholarly journals Draft Genome Sequence of Lactobacillus paraplantarum OSY-TC318, a Producer of the Novel Lantibiotic Paraplantaracin TC318

2019 ◽  
Vol 8 (19) ◽  
Author(s):  
Walaa E. Hussein ◽  
En Huang ◽  
Ismet Ozturk ◽  
Ahmed E. Yousef
Keyword(s):  
Genome Size ◽  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Peptide Sequencing ◽  
Draft Genome Sequence ◽  
The Novel ◽  
Content Type ◽  
A Genome ◽  
Lactobacillus Paraplantarum

Lactobacillus paraplantarum OSY-TC318 was isolated from Turkish Tulum cheese and found to produce a potent anti-Gram-positive peptide. Sequencing of the OSY-TC318 genome revealed a genome size of 3,587,488 bp and an average GC content of 43.4%.

scholarly journals Draft Genome Sequence of the Non-Microcystin-Producing Microcystis aeruginosa Strain KLA2, Isolated from a Freshwater Reservoir in Northern California, USA

2020 ◽  
Vol 9 (3) ◽  
Author(s):  
Pia H. Moisander ◽  
Mari Ochiai
Keyword(s):  
Secondary Metabolites ◽  
Genome Size ◽  
Microcystis Aeruginosa ◽  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Microcystin Production ◽  
Freshwater Reservoir

We report a draft genome sequence for Microcystis aeruginosa KLA2. The total draft genome size is 5,213,465 bp with a GC content of 42.5%. The genome does not have genes indicative of microcystin production but does contain genes indicative of production of several other secondary metabolites.

scholarly journals Draft Reference Genome Sequence of Corynebacterium mastitidis 16-1433, Isolated from a Mouse

2018 ◽  
Vol 6 (7) ◽  
Author(s):  
Christopher Cheleuitte-Nieves ◽  
Christopher A. Gulvik ◽  
Ben W. Humrighouse ◽  
Melissa E. Bell ◽  
Aaron Villarma ◽  
...  
Keyword(s):  
Genome Size ◽  
Genome Sequence ◽  
Reference Genome ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Read Coverage ◽  
Reference Genome Sequence

ABSTRACT We report here a nearly complete draft genome sequence for a Corynebacterium mastitidis isolate from a mouse. The total read coverage is 198×, and the genome size is 2,264,319 bp with a 69.04% GC content. This genome complements the only other genome available for C. mastitidis , which was obtained from a sheep.

scholarly journals Draft Genome Sequence of Mycobacteroides sp. Strain LB1, Isolated from the Sputum of a Cystic Fibrosis Patient

2020 ◽  
Vol 9 (47) ◽  
Author(s):  
Peter Menzel ◽  
Rolf Schwarzer ◽  
Johannes Helmuth ◽  
Inna Friesen
Keyword(s):  
Cystic Fibrosis ◽  
Cystic Fibrosis Patient ◽  
Genome Size ◽  
Genome Sequence ◽  
Novel Species ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence

ABSTRACT We report the draft genome sequence of Mycobacteroides sp. strain LB1, isolated from the sputum of a cystic fibrosis patient in Berlin, Germany. The genome size is 4.9 Mbp with a GC content of 63.8%. The genome is only distantly related to other Mycobacteroides species, suggesting that it may represent a novel species.

scholarly journals Draft Genome Sequence of the Phenol-Degrading Bacterium Pseudomonas putida H

2015 ◽  
Vol 3 (4) ◽  
Author(s):  
Paula Vizoso ◽  
Nicolas Pacheco ◽  
Macarena Bastias-Molina ◽  
Claudio Meneses ◽  
Ignacio Poblete-Castro
Keyword(s):  
Pseudomonas Putida ◽  
Genome Size ◽  
Genome Sequence ◽  
Aromatic Compounds ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Future Studies ◽  
Degrading Bacterium

In this study, we report the draft genome of Pseudomonas putida H, a well-known bacterium capable of degrading various aromatic compounds. Its genome size is 6,065 Mbp with a GC content of 61.6%. This work will aid future studies on this versatile bacterium.

scholarly journals Genome Sequence of Clostridium botulinum Strain Adk2012 Associated with a Foodborne Botulinum Case in Tottori, Japan, in 2012

2017 ◽  
Vol 5 (34) ◽  
Author(s):  
Hiroshi Asakura ◽  
Shiori Yamamoto ◽  
Yoshika Momose ◽  
Haru Kato ◽  
Masaaki Iwaki ◽  
...  
Keyword(s):  
Genome Size ◽  
Genome Sequence ◽  
Clostridium Botulinum ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Foodborne Botulism

ABSTRACT We report here a draft genome sequence of Clostridium botulinum Adk2012 responsible for a foodborne botulism case that occurred in Tottori, Japan, in 2012. Its genome size was 2,904,173 bp, with 46 rRNAs and 54 tRNAs, at a coverage of 14.5×.

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