scholarly journals Draft Genome Sequences of Fungus Aspergillus calidoustus

2016 ◽  
Vol 4 (2) ◽  
Author(s):  
Fabian Horn ◽  
Jörg Linde ◽  
Derek J. Mattern ◽  
Grit Walther ◽  
Reinhard Guthke ◽  
...  
Keyword(s):  
Secondary Metabolite ◽  
Genome Sequence ◽  
Functional Annotation ◽  
Draft Genome ◽  
Genome Mining ◽  
Gene Clusters ◽  
Draft Genome Sequence ◽  
Genome Sequences

Here, we report the draft genome sequence of Aspergillus calidoustus (strain SF006504) . The functional annotation of A. calidoustus predicts a relatively large number of secondary metabolite gene clusters. The presented genome sequence builds the basis for further genome mining.

scholarly journals Draft Genome Sequence of Streptomyces olivochromogenes NBRC 3561, a Bioactive Peptide-Producing Actinobacterium

2017 ◽  
Vol 5 (39) ◽  
Author(s):  
Hideo Dohra ◽  
Yuto Miyake ◽  
Shinya Kodani
Keyword(s):  
Secondary Metabolite ◽  
Genome Sequence ◽  
Draft Genome ◽  
Gene Clusters ◽  
Bioactive Peptide ◽  
Draft Genome Sequence ◽  
Content Type

ABSTRACT Recently, we found that Streptomyces olivochromogenes NBRC 3561 produced a bioactive peptide, so we sequenced its genome to clarify its biosynthesis. We report here the draft genome sequence of S. olivochromogenes NBRC 3561, in which 40 potential secondary metabolite gene clusters were predicted by antiSMASH.

scholarly journals Draft Genome Sequence and Secondary Metabolite Biosynthetic Potential of the Lysobacter niastensis Type Strain DSM 18481

2021 ◽  
Vol 10 (1) ◽  
Author(s):  
Paolo Turrini ◽  
Irene Artuso ◽  
Marco Tescari ◽  
Gabriele Andrea Lugli ◽  
Emanuela Frangipani ◽  
...  
Keyword(s):  
Secondary Metabolites ◽  
Small Molecules ◽  
Secondary Metabolite ◽  
Genome Sequence ◽  
Type Strain ◽  
Draft Genome ◽  
Gene Clusters ◽  
Draft Genome Sequence ◽  
Content Type

ABSTRACT Lysobacter niastensis belongs to a group of bacterial predators that produce a number of bioactive small molecules endowed with lytic properties toward other microorganisms. Here, we report the draft genome sequence of the type strain DSM 18481 and the identification of gene clusters implicated in the biosynthesis of secondary metabolites.

scholarly journals Draft Genome Sequence of Streptomyces sp. TP-A0356, a Producer of Yatakemycin

2015 ◽  
Vol 3 (6) ◽  
Author(s):  
Hisayuki Komaki ◽  
Natsuko Ichikawa ◽  
Akira Hosoyama ◽  
Nobuyuki Fujita ◽  
Yasuhiro Igarashi
Keyword(s):  
Secondary Metabolite ◽  
Genome Sequence ◽  
Sequence Data ◽  
Draft Genome ◽  
Gene Clusters ◽  
Polyketide Synthases ◽  
Draft Genome Sequence ◽  
Antitumor Antibiotic ◽  
Streptomyces Sp ◽  
Peptide Synthetases

Here, we report the draft genome sequence of Streptomyces sp. TP-A0356, a producer of a potent antitumor antibiotic, yatakemycin, to evaluate potential for secondary metabolite production. The genome sequence data suggest the presence of at least nine gene clusters for polyketide synthases and nonribosomal peptide synthetases in this strain.

scholarly journals Draft Genome Sequence of Enterococcus durans OSY-EGY, a Multiple-Antimicrobial-Peptide Producer Isolated from Egyptian Hard Cheese

2019 ◽  
Vol 8 (28) ◽  
Author(s):  
Walaa E. Hussein ◽  
Lingzi Xiaoli ◽  
Ahmed E. Yousef
Keyword(s):  
Genome Sequence ◽  
Antimicrobial Agents ◽  
Draft Genome ◽  
Genome Mining ◽  
Gene Clusters ◽  
Draft Genome Sequence ◽  
Biosynthetic Gene Clusters ◽  
Content Type ◽  
Enterococcus Durans ◽  
A Genome

Enterococcus durans OSY-EGY was isolated recently from cheese. The strain produces potent antimicrobial agents. Here, we present the draft genome sequence of the strain, with a genome size of 3,230,625 bp and an average G+C content of 37.69%. Draft genome mining identified several biosynthetic gene clusters encoding multiple antimicrobial peptides.

scholarly journals Draft Genome Sequence of Streptomyces spongiicola Strain 531S, an Actinobacterium Isolated from Marine Sediment

2019 ◽  
Vol 8 (3) ◽  
Author(s):  
Hideo Dohra ◽  
Issara Kaweewan ◽  
Beatriz E. Casareto ◽  
Yoshimi Suzuki ◽  
Shinya Kodani
Keyword(s):  
Secondary Metabolite ◽  
Genome Sequence ◽  
Marine Sediment ◽  
Draft Genome ◽  
Gene Clusters ◽  
Draft Genome Sequence ◽  
Content Type

Streptomyces spongiicola strain 531S (NBRC 113560) was isolated from marine sediment on a beach on Sesoko Island (Okinawa, Japan). We report here the draft genome sequence of S. spongiicola 531S, in which 24 potential secondary metabolite gene clusters were predicted with antiSMASH.

scholarly journals Draft Genome Sequence of the Lichen-Forming Fungus Ramalina intermedia Strain YAF0013

2018 ◽  
Vol 6 (23) ◽  
Author(s):  
Yi Wang ◽  
Xiaolong Yuan ◽  
Li Chen ◽  
Xinyu Wang ◽  
Changtian Li
Keyword(s):  
Secondary Metabolites ◽  
Genome Sequence ◽  
Functional Annotation ◽  
Draft Genome ◽  
Genome Mining ◽  
Draft Genome Sequence ◽  
Content Type

ABSTRACT Here, we report a draft genome sequence of Ramalina intermedia strain YAF0013. The functional annotation of R. intermedia provides important information related to its ability to produce secondary metabolites. The genome sequence reported here builds the basis for further genome mining.

scholarly journals Draft Genome Sequence of Fungus Clonostachys rosea Strain YKD0085

2016 ◽  
Vol 4 (3) ◽  
Author(s):  
Shuai Liu ◽  
Yaowen Chang ◽  
Xujia Hu ◽  
Xuanyun Gong ◽  
Yingtong Di ◽  
...  
Keyword(s):  
Secondary Metabolites ◽  
Genome Sequence ◽  
Functional Annotation ◽  
Draft Genome ◽  
Genome Mining ◽  
Draft Genome Sequence ◽  
Clonostachys Rosea

Here, we report the draft genome sequence of Clonostachys rosea (strain YKD0085). The functional annotation of C. rosea provides important information related to its ability to produce secondary metabolites. The genome sequence presented here builds the basis for further genome mining.

scholarly journals Draft Genome Sequence of Streptomyces sp. Strain PTY087I2, Isolated from Styela canopus , a Panamanian Tunicate

2016 ◽  
Vol 4 (5) ◽  
Author(s):  
Samantha M. Gromek ◽  
Anne A. Sung ◽  
Jonathan L. Klassen ◽  
Marcy J. Balunas
Keyword(s):  
Secondary Metabolite ◽  
Genome Sequence ◽  
Marine Bacterium ◽  
Draft Genome ◽  
Gene Clusters ◽  
Draft Genome Sequence ◽  
Nucleotide Identity ◽  
Average Nucleotide Identity ◽  
Bocas Del Toro ◽  
Streptomyces Sp

Streptomyces sp. PTY087I2 is a marine bacterium isolated from Styela canopus , a tunicate collected in Bocas del Toro, Panama. Here, we report a draft genome sequence for this bacterium, found to have 94.7% average nucleotide identity (ANI) with Streptomyces roseosporus NRRL 11379, and containing a diverse suite of secondary metabolite gene clusters.

scholarly journals Draft Genome Sequence of Streptomyces sp. TP-A0871, a Producer of Heronamide C

2015 ◽  
Vol 3 (6) ◽  
Author(s):  
Hisayuki Komaki ◽  
Natsuko Ichikawa ◽  
Akira Hosoyama ◽  
Nobuyuki Fujita ◽  
Yasuhiro Igarashi
Keyword(s):  
Secondary Metabolites ◽  
Genome Sequence ◽  
Draft Genome ◽  
Genome Mining ◽  
Gene Clusters ◽  
Draft Genome Sequence ◽  
Orphan Gene ◽  
Nonribosomal Peptide ◽  
Streptomyces Sp ◽  
Insight Into

Streptomyces sp. TP-A0871 produces the polyene macrolactam heronamide C. Here, we report its draft genome sequence to get insight into heronamide biosynthesis and genome-mining for novel secondary metabolites of polyketide and nonribosomal peptide classes. The genome encodes over nine orphan gene clusters for polyketide and/or nonribosomal peptide syntheses.

scholarly journals Draft Genome Sequence of Streptomyces sp. TP-A0874, a Catechoserine Producer

2016 ◽  
Vol 4 (5) ◽  
Author(s):  
Hisayuki Komaki ◽  
Akira Hosoyama ◽  
Natsuko Ichikawa ◽  
Yasuhiro Igarashi
Keyword(s):  
Genome Sequence ◽  
Cell Invasion ◽  
Draft Genome ◽  
Gene Clusters ◽  
Bioinformatic Analysis ◽  
Biosynthetic Gene Cluster ◽  
Tumor Cell Invasion ◽  
Draft Genome Sequence ◽  
Biosynthetic Gene ◽  
Streptomyces Sp

We report the draft genome sequence of Streptomyces sp. TP-A0874 isolated from compost. This strain produces catechoserine, a new catecholate-type inhibitor of tumor cell invasion. The genome harbors at least six gene clusters for polyketide and nonribosomal peptide biosyntheses. The biosynthetic gene cluster for catechoserines was identified by bioinformatic analysis.

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