Draft Genome Sequences of Sulfurovum spp. TSL1 and TSL6, Two Sulfur-Oxidizing Bacteria Isolated from Marine Sediment

Sulfurovum spp. TSL1 and TSL6 are sulfur-oxidizing chemolithoautotrophic bacteria isolated from the tsunami-launched marine sediment in the Great East Japan earthquake. This announcement describes the draft genome sequences of the two isolates that possess the gene sets for the sulfur oxidation pathway.

Quaternary nannoplankton in the Northeast Java Basin

In Indonesia, nannofosils are commonly used for age estimation on Miocene marine sediment, but they are rarely performed on Quaternary sediment. This paper introduces two nannofossil biozones, Martini (1971) and Backman et al. (2012) and the comparison between the two biozones. An uninterrupted interval of marine sediments was described and picked for quantitative nannoplankton analysis. The samples were taken from Ledok Formation to Lidah Formation in Pati Region, Northeast Java Basin. The samples were prepared by quick smear slides method and and analyzed by quantitative field of view method. Martini (1971) biozone can be used to subdivide the Late Miocene–Pleistocene sediments into 5 biozones, but Backman et al. (2012) can be used to classify the same sediments into 8 biozones. The biozone subdivision from Backman et al. (2012) is more detailed than that of Martini (1971) because an updated dating and biozone in the three new dating zone data.

Uncovering the potential of actinobacterium BLH 1-22 isolated from marine sediment as a producer of antibiotics

Actinobacteria have been known as producers of many bioactive compounds. The present study examines ten marine Actinobacterial isolates, aiming to investigate their potential as producers of antimicrobial compounds. The secondary metabolites were extracted from these Actinobacteria using ethyl acetate, and the crude extracts were tested for their bioactivity against Escherichia coli, Bacillus subtilis, and Micrococcus luteus. The antibacterial screening showed that the crude extracts of these Actinobacteria inhibit the growth of indicator strains. The extracts of isolate BLH 1-22 were further analysed using high-performance liquid chromatography (HPLC), which showed potential compounds with peak and retention time similar to the antibiotic standards (i.e., erythromycin, ampicillin, tetracycline, and penicillin). In addition to the HPLC profile, molecular identification showed that the isolate BLH 1-22 was similar to Micromonospora chalcea (99.6%). Further genome characterization of the strain, as well as purification and fractionation of the metabolite extracts, are important to obtain a comprehensive study on the potential of isolate BLH 1-22 as antibiotic compound producers. This study reported the potential of Micromonospora BLH 1-22 isolated from marine sediment. Hence, it also highlighted the potential of Actinobacteria isolated from Indonesian environments for bioprospecting studies.

Metagenomics of Antarctic Marine Sediment Reveals Potential for Diverse Chemolithoautotrophy

The impacts of climate change in polar regions, like Antarctica, have the potential to alter numerous ecosystems and biogeochemical cycles. Increasing temperature and freshwater runoff from melting ice can have profound impacts on the cycling of organic and inorganic nutrients between the pelagic and benthic ecosystems.

Distillation of total reduced inorganic sulfur from marine sediment samples v1

This procedure can be used to precipitate H2S as Ag2S from the Total Reduced Inorganic Sulfur (TRIS) fraction of marine sediments.