scholarly journals Draft Genome Sequence of Streptomyces spongiicola Strain 531S, an Actinobacterium Isolated from Marine Sediment

2019 ◽  
Vol 8 (3) ◽  
Author(s):  
Hideo Dohra ◽  
Issara Kaweewan ◽  
Beatriz E. Casareto ◽  
Yoshimi Suzuki ◽  
Shinya Kodani
Keyword(s):  
Secondary Metabolite ◽  
Genome Sequence ◽  
Marine Sediment ◽  
Draft Genome ◽  
Gene Clusters ◽  
Draft Genome Sequence ◽  
Content Type

Streptomyces spongiicola strain 531S (NBRC 113560) was isolated from marine sediment on a beach on Sesoko Island (Okinawa, Japan). We report here the draft genome sequence of S. spongiicola 531S, in which 24 potential secondary metabolite gene clusters were predicted with antiSMASH.

scholarly journals Draft Genome Sequence of Streptomyces olivochromogenes NBRC 3561, a Bioactive Peptide-Producing Actinobacterium

2017 ◽  
Vol 5 (39) ◽  
Author(s):  
Hideo Dohra ◽  
Yuto Miyake ◽  
Shinya Kodani
Keyword(s):  
Secondary Metabolite ◽  
Genome Sequence ◽  
Draft Genome ◽  
Gene Clusters ◽  
Bioactive Peptide ◽  
Draft Genome Sequence ◽  
Content Type

ABSTRACT Recently, we found that Streptomyces olivochromogenes NBRC 3561 produced a bioactive peptide, so we sequenced its genome to clarify its biosynthesis. We report here the draft genome sequence of S. olivochromogenes NBRC 3561, in which 40 potential secondary metabolite gene clusters were predicted by antiSMASH.

scholarly journals Draft Genome Sequence and Secondary Metabolite Biosynthetic Potential of the Lysobacter niastensis Type Strain DSM 18481

2021 ◽  
Vol 10 (1) ◽  
Author(s):  
Paolo Turrini ◽  
Irene Artuso ◽  
Marco Tescari ◽  
Gabriele Andrea Lugli ◽  
Emanuela Frangipani ◽  
...  
Keyword(s):  
Secondary Metabolites ◽  
Small Molecules ◽  
Secondary Metabolite ◽  
Genome Sequence ◽  
Type Strain ◽  
Draft Genome ◽  
Gene Clusters ◽  
Draft Genome Sequence ◽  
Content Type

ABSTRACT Lysobacter niastensis belongs to a group of bacterial predators that produce a number of bioactive small molecules endowed with lytic properties toward other microorganisms. Here, we report the draft genome sequence of the type strain DSM 18481 and the identification of gene clusters implicated in the biosynthesis of secondary metabolites.

scholarly journals Draft Genome Sequences of Fungus Aspergillus calidoustus

2016 ◽  
Vol 4 (2) ◽  
Author(s):  
Fabian Horn ◽  
Jörg Linde ◽  
Derek J. Mattern ◽  
Grit Walther ◽  
Reinhard Guthke ◽  
...  
Keyword(s):  
Secondary Metabolite ◽  
Genome Sequence ◽  
Functional Annotation ◽  
Draft Genome ◽  
Genome Mining ◽  
Gene Clusters ◽  
Draft Genome Sequence ◽  
Genome Sequences

Here, we report the draft genome sequence of Aspergillus calidoustus (strain SF006504) . The functional annotation of A. calidoustus predicts a relatively large number of secondary metabolite gene clusters. The presented genome sequence builds the basis for further genome mining.

scholarly journals Draft Genome Sequence of Streptomyces cavourensis YBQ59, an Endophytic Producer of Antibiotics Bafilomycin D, Nonactic Acid, Prelactone B, and 5,11-Epoxy-10-Cadinanol

2018 ◽  
Vol 7 (11) ◽  
Author(s):  
Huy Quang Nguyen ◽  
Nguyen Thi-Hanh Vu ◽  
Ha Hoang Chu ◽  
Son Ky Chu ◽  
Ha Hoang ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Gene Clusters ◽  
Draft Genome Sequence ◽  
Biosynthetic Pathways ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes

This study reports the draft genome sequence of the endophytic Streptomyces cavourensis strain YBQ59, produces the antibiotics bafilomycin D, nonactic acid, prelactone B, and 5,11-epoxy-10-cadinanol. The draft genome sequence comprises ∼10.2 Mb, with a GC content of 64% and 8,958 predicted protein-coding genes, of which 14 gene clusters were found to associate with antibiotic biosynthetic pathways.

scholarly journals Draft Genome Sequence of the Most Traditional ε-Poly-l-Lysine Producer, Streptomyces albulus NBRC14147

2019 ◽  
Vol 8 (4) ◽  
Author(s):  
Kazuya Yamanaka ◽  
Yoshimitsu Hamano
Keyword(s):  
Secondary Metabolite ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Lysine Producer

The genus Streptomyces is known for its secondary metabolite biosynthetic capacities. We report here the draft genome sequence of the most extensively studied ε-poly-l-lysine producer, Streptomyces albulus NBRC14147.

scholarly journals Draft Genome Sequence of Gordonia lacunae BS2T

2017 ◽  
Vol 5 (40) ◽  
Author(s):  
Kim Durrell ◽  
Alaric Prins ◽  
Marilize Le Roes-Hill
Keyword(s):  
South Africa ◽  
Secondary Metabolite ◽  
Genome Sequence ◽  
Draft Genome ◽  
Soil Bacterium ◽  
Draft Genome Sequence ◽  
Biosynthetic Genes ◽  
Content Type ◽  
New Compounds

ABSTRACT We report here the draft genome sequence of the soil bacterium Gordonia lacunae BS2T (= DSM 45085T = JCM 14873T = NRRL B-24551T), isolated from an estuary in Plettenberg Bay, South Africa. Analysis of the draft genome revealed that more than 40% of the secondary metabolite biosynthetic genes encode new compounds.

scholarly journals Draft Genome Sequence of Desulfosporosinus fructosivorans Strain 63.6FT, Isolated from Marine Sediment in the Baltic Sea

2019 ◽  
Vol 8 (31) ◽  
Author(s):  
Bela Hausmann ◽  
Verona Vandieken ◽  
Petra Pjevac ◽  
Katharina Schreck ◽  
Craig W. Herbold ◽  
...  
Keyword(s):  
Baltic Sea ◽  
Genome Sequence ◽  
Marine Sediment ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Strictly Anaerobic ◽  
The Baltic Sea ◽  
Content Type ◽  
Sulfate Reducing ◽  
The Baltic

Desulfosporosinus fructosivorans strain 63.6FT is a strictly anaerobic, spore-forming, sulfate-reducing bacterium isolated from marine sediment in the Baltic Sea. Here, we report the draft genome sequence of D. fructosivorans 63.6FT.

scholarly journals Draft Genome Sequence of Bacillus subtilis SB-14, an Antimicrobially Active Isolate from Namibian Social Spiders (Stegodyphus dumicola)

2019 ◽  
Vol 8 (25) ◽  
Author(s):  
Stine Sofie Frank Nielsen ◽  
Simone Weiss ◽  
Seven Nazipi ◽  
Ian P. G. Marshall ◽  
Trine Bilde ◽  
...  
Keyword(s):  
Bacillus Subtilis ◽  
Genome Sequence ◽  
Draft Genome ◽  
Gene Clusters ◽  
Draft Genome Sequence ◽  
Biosynthetic Gene ◽  
Biosynthetic Gene Clusters ◽  
High Quality ◽  
Social Spider ◽  
Content Type

We present the high-quality draft genome sequence of Bacillus subtilis SB-14, isolated from the Namibian social spider Stegodyphus dumicola. In accordance with its antimicrobial activity, both known and potentially novel antimicrobial biosynthetic gene clusters were identified in the genome of SB-14.

scholarly journals Draft Genome Sequence of Kroppenstedtia sanguinis X0209T, a Clinical Isolate Recovered from Human Blood

2019 ◽  
Vol 8 (24) ◽  
Author(s):  
Robert A. Arthur ◽  
Ainsley C. Nicholson ◽  
Ben W. Humrighouse ◽  
John R. McQuiston ◽  
Brent A. Lasker
Keyword(s):  
Clinical Isolate ◽  
Genome Sequence ◽  
Human Blood ◽  
Draft Genome ◽  
Gene Clusters ◽  
Illumina Miseq ◽  
Draft Genome Sequence ◽  
Biosynthetic Gene ◽  
Biosynthetic Gene Clusters ◽  
Content Type

Kroppenstedtia sanguinis X0209T, a thermoactinomycete, was isolated from the blood of a patient in Sweden. We report on the draft genome sequence obtained with an Illumina MiSeq instrument. The assembled genome totaled 3.73 Mb and encoded 3,583 proteins. Putative genes for virulence, transposons, and biosynthetic gene clusters have been identified.

scholarly journals Draft Genome Sequence of Aquincola tertiaricarbonis MIMtkpLc11, an Aerobic Anoxygenic Phototrophic Bacterial Strain Isolated from Biological Soil Crusts

2018 ◽  
Vol 7 (12) ◽  
Author(s):  
Kai Tang ◽  
Bo Yuan ◽  
Yonghui Zeng ◽  
Lijuan Jia ◽  
Fuying Feng
Keyword(s):  
Genome Sequence ◽  
Bacterial Strain ◽  
Inner Mongolia ◽  
Draft Genome ◽  
Gene Clusters ◽  
Biological Soil Crusts ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Soil Crusts ◽  
Photosynthesis Gene

Aquincola tertiaricarbonis strain MIMtkpLc11 was isolated from biological soil crusts in Inner Mongolia, China. The strain contains photosynthesis gene clusters.

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