scholarly journals Draft Genome Sequences of Two Marinitoga camini Isolates Producing Bacterioviruses

2016 ◽  
Vol 4 (6) ◽  
Author(s):  
Coraline Mercier ◽  
Julien Lossouarn ◽  
Thomas Haverkamp ◽  
Nadège Bienvenu ◽  
Anne Godfroy ◽  
...  

Here, we present the draft genome sequences of two thermophilic Marinitoga strain members of the Thermotogales order, Marinitoga camini DV1155 and Marinitoga camini DV1197. These strains were isolated from deep-sea hydrothermal vents of the Mid-Atlantic Ridge.

2016 ◽  
Vol 4 (6) ◽  
Author(s):  
Christopher A. Abin ◽  
James T. Hollibaugh

Vulcanibacillus modesticaldus BR T was isolated from calcite-rich, metalliferous core samples collected at the Rainbow deep-sea hydrothermal vent field on the Mid-Atlantic Ridge. Here, we report the 2.2-Mb draft genome sequence for this strain, consisting of 100 contigs with a G+C content of 33.6% and 2,227 protein-coding sequences.


2021 ◽  
Vol 10 (3) ◽  
Author(s):  
Megan M. Mullis ◽  
Rachel E. Weisend ◽  
Brandi Kiel Reese

ABSTRACT We report the draft genomes of environmental cultures collected from shallow sediment from the western flank of the Mid-Atlantic Ridge. The isolates were most closely related to Idiomarina abyssalis strain KJE (100% complete), Marinobacter salarius strain NP2017 (97.6% complete), and Marinobacter salarius strain AT3901 (98.4% complete). Isolates identified as an Idiomarina species possess complete nitrite oxidation and reduction pathways, and isolates identified as a Marinobacter species possess complete dissimilatory nitrate reduction pathways.


2017 ◽  
Vol 5 (17) ◽  
Author(s):  
Chen Chen ◽  
Li Sun

ABSTRACT We report here the draft genome sequence of Exiguobacterium sp. HVEsp1, a thermophilic bacterium isolated from a deep-sea hydrothermal vent. The estimated genome size of this strain is 2,838,499 bp with a G+C content of 48.2%. The genome sequence data provide valuable information that will facilitate studies on the adaptation mechanisms of bacteria living in deep-sea hydrothermal vents.


2016 ◽  
Vol 4 (4) ◽  
Author(s):  
Huan Zhang ◽  
Rui Liu ◽  
Mengqiang Wang ◽  
Hao Wang ◽  
Qiang Gao ◽  
...  

This report describes the draft genome sequences of two strains, Pseudoalteromonas telluritireducens DSM 16098 and P. spiralis DSM 16099, which were isolated from hydrothermal vents of the Juan de Fuca Ridge. The reads generated by an Ion Torrent PGM were assembled into contigs with total sizes of 4.4 Mb and 4.1 Mb for DSM 16098 and DSM 16099, respectively.


2016 ◽  
Vol 4 (4) ◽  
Author(s):  
Vanessa Rédou ◽  
Abhishek Kumar ◽  
Matthieu Hainaut ◽  
Bernard Henrissat ◽  
Eric Record ◽  
...  

Cryptococcus sp. strain Mo29 was isolated from the Rainbow hydrothermal site on the Mid-Atlantic Ridge. Here, we present the draft genome sequence of this basidiomycetous yeast strain, which has highlighted its biotechnological potential as revealed by the presence of genes involved in the synthesis of secondary metabolites and biotechnologically important enzymes.


2006 ◽  
Vol 56 (5) ◽  
pp. 1047-1053 ◽  
Author(s):  
S. L'Haridon ◽  
M. L. Miroshnichenko ◽  
N. A. Kostrikina ◽  
B. J. Tindall ◽  
S. Spring ◽  
...  

A novel anaerobic, moderately thermophilic, spore-forming bacterium, designated strain BRT, was isolated from deep-sea hydrothermal core samples collected at the Rainbow vent field on the Mid-Atlantic Ridge (36° 14′ N 33° 54′ W). The cells were found to be rod-shaped, non-motile, Gram-positive and spore-forming. The organism grew in the temperature range 37–60 °C, with an optimum at 55 °C, and at pH values in the range 6–8.5, with an optimum around pH 7. NaCl concentrations for growth were in the range 10–40 g l−1, with an optimum at 20–30 g l−1. Strain BRT grew chemo-organoheterotrophically with carbohydrates, proteinaceous substrates and organic acids with nitrate as electron acceptor. The novel isolate was not able to ferment. The G+C content of the genomic DNA was 34.5 mol%. Phylogenetic analysis of the 16S rRNA gene sequence placed strain BRT in the Bacillaceae within the class ‘Bacilli’. On the basis of the phenotypic and phylogenetic data, this isolate should be described as a member of a novel genus, for which the name Vulcanibacillus gen. nov. is proposed. The type species is Vulcanibacillus modesticaldus sp. nov., with the type strain BRT (=DSM 14931T=JCM 12998T).


2021 ◽  
Author(s):  
Merle Ücker ◽  
Rebecca Ansorge ◽  
Yui Sato ◽  
Lizbeth Sayavedra ◽  
Corinna Breusing ◽  
...  

AbstractThe composition and diversity of animal microbiomes is shaped by a variety of factors, many of them interacting, such as host traits, the environment, and biogeography. Hybrid zones, in which the ranges of two host species meet and hybrids are found, provide natural experiments for determining the drivers of microbiome communities, but have not been well studied in marine environments. Here, we analysed the composition of the symbiont community in two deep-sea, Bathymodiolus mussel species along their known distribution range at hydrothermal vents on the Mid-Atlantic Ridge, with a focus on the hybrid zone where they interbreed. In-depth metagenomic analyses of the sulphur-oxidising symbionts of 30 mussels from the hybrid zone, at a resolution of single nucleotide polymorphism analyses of ~2500 orthologous genes, revealed that parental and hybrid mussels (F2–F4 generation) have genetically indistinguishable symbionts. While host genetics does not appear to affect symbiont composition in these mussels, redundancy analyses showed that geographic location of the mussels on the Mid-Atlantic Ridge explained most of the symbiont genetic variability compared to the other factors. We hypothesise that geographic structuring of the free-living symbiont population plays a major role in driving the composition of the microbiome in these deep-sea mussels.


2016 ◽  
Vol 4 (4) ◽  
Author(s):  
Vanessa Rédou ◽  
Abhishek Kumar ◽  
Matthieu Hainaut ◽  
Bernard Henrissat ◽  
Eric Record ◽  
...  

Cadophora malorumMo12 was isolated from the Rainbow hydrothermal site on the Mid-Atlantic Ridge. We present the draft genome sequence of this filamentous fungal strain, which has high biotechnological potentials as revealed by the presence of genes encoding biotechnologically important enzymes and genes involved in the synthesis of secondary metabolites.


2002 ◽  
Vol 41 (2) ◽  
pp. 105-114 ◽  
Author(s):  
Nathalie Wery ◽  
Marie-Anne Cambon-Bonavita ◽  
Françoise Lesongeur ◽  
Georges Barbier

Sign in / Sign up

Export Citation Format

Share Document