scholarly journals Draft Genome Sequences of Idiomarina abyssalis Strain KJE, Marinobacter salarius Strain NP2017, and Marinobacter salarius Strain AT3901, Isolated from Deep-Sea Sediment near the Western Flank of the Mid-Atlantic Ridge

2021 ◽  
Vol 10 (3) ◽  
Author(s):  
Megan M. Mullis ◽  
Rachel E. Weisend ◽  
Brandi Kiel Reese
Keyword(s):  
Deep Sea ◽  
Nitrate Reduction ◽  
Draft Genome ◽  
Nitrite Oxidation ◽  
Genome Sequences ◽  
Content Type ◽  
Deep Sea Sediment ◽  
Western Flank ◽  
Dissimilatory Nitrate Reduction ◽  
Mid Atlantic Ridge

ABSTRACT We report the draft genomes of environmental cultures collected from shallow sediment from the western flank of the Mid-Atlantic Ridge. The isolates were most closely related to Idiomarina abyssalis strain KJE (100% complete), Marinobacter salarius strain NP2017 (97.6% complete), and Marinobacter salarius strain AT3901 (98.4% complete). Isolates identified as an Idiomarina species possess complete nitrite oxidation and reduction pathways, and isolates identified as a Marinobacter species possess complete dissimilatory nitrate reduction pathways.

scholarly journals Draft Genome Sequence of Thalassospira xiamenensis Strain MCCC 1A03042T

2017 ◽  
Vol 5 (9) ◽  
Author(s):  
Meiqing Li ◽  
Shuo Yang ◽  
Qiliang Lai ◽  
Zongze Shao
Keyword(s):  
Heavy Metal ◽  
Indian Ocean ◽  
Deep Sea ◽  
Draft Genome ◽  
Protein Coding ◽  
Content Type ◽  
Deep Sea Sediment ◽  
Arsenic Tolerance ◽  
Protein Coding Genes ◽  
The Indian Ocean

ABSTRACT Thalassospira xiamenensis strain MCCC 1A03042T was isolated from deep-sea sediment of the Indian Ocean, and it was characterized with heavy-metal arsenic tolerance. Here, we present the draft genome of strain MCCC 1A03042T, which contains 4,786,207 bp with a G+C content of 52.6% and 4,359 protein-coding genes.

scholarly journals Draft Genome Sequences of Two Marinitoga camini Isolates Producing Bacterioviruses

2016 ◽  
Vol 4 (6) ◽  
Author(s):  
Coraline Mercier ◽  
Julien Lossouarn ◽  
Thomas Haverkamp ◽  
Nadège Bienvenu ◽  
Anne Godfroy ◽  
...  
Keyword(s):  
Deep Sea ◽  
Hydrothermal Vents ◽  
Draft Genome ◽  
Genome Sequences ◽  
Mid Atlantic Ridge

Here, we present the draft genome sequences of two thermophilic Marinitoga strain members of the Thermotogales order, Marinitoga camini DV1155 and Marinitoga camini DV1197. These strains were isolated from deep-sea hydrothermal vents of the Mid-Atlantic Ridge.

scholarly journals Genome Sequence of Serinicoccus profundi, a Novel Actinomycete Isolated from Deep-Sea Sediment

2011 ◽  
Vol 193 (22) ◽  
pp. 6413-6413 ◽  
Author(s):  
Jing Xiao ◽  
Yingxue Luo ◽  
Jun Xu
Keyword(s):  
Indian Ocean ◽  
Genome Sequence ◽  
Deep Sea ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Aerobic Bacterium ◽  
Content Type ◽  
Deep Sea Sediment ◽  
Moderately Halophilic ◽  
The Indian Ocean

Serinicoccus profundiMCCC 1A05965Twas isolated from deep-sea sediment collected from the Indian Ocean. It was a Gram-positive, moderately halophilic, aerobic bacterium. Here, we describe the 3.4-Mbp draft genome sequence ofS. profundiMCCC 1A05965T.

scholarly journals Draft Genome Sequences of 12 Mycolicibacterium smegmatis Strains Resistant to Imidazo[1,2-b][1,2,4,5]Tetrazines

2019 ◽  
Vol 8 (16) ◽  
Author(s):  
Aleksey A. Vatlin ◽  
Kirill V. Shur ◽  
Valery N. Danilenko ◽  
Dmitry A. Maslov
Keyword(s):  
Draft Genome ◽  
Transcriptional Repressor ◽  
Antituberculosis Drug ◽  
Genome Sequences ◽  
Content Type ◽  
Drug Candidates

Here, we report 12 draft genome sequences of mutant Mycolicibacterium smegmatis strains resistant to imidazo[1,2-b][1,2,4,5]tetrazines, which are antituberculosis drug candidates. We have identified 7 different mutations in the MSMEG_1380 gene, which encodes the AcrR/TetR_N transcriptional repressor, which may activate efflux-mediated resistance.

scholarly journals Draft Genome Sequences of Three Flavobacterium psychrophilum Strains Isolated from Diseased Ayu (Plecoglossus altivelis altivelis) Caught at Three Sites in the Kagami River in Kochi, Japan

2019 ◽  
Vol 8 (34) ◽  
Author(s):  
Hazuki Yamashita ◽  
Takayuki Wada ◽  
Yusuke Kato ◽  
Takuji Ikeda ◽  
Masayuki Imajoh
Keyword(s):  
Draft Genome ◽  
Psychrophilic Bacterium ◽  
Genome Sequences ◽  
Plecoglossus Altivelis ◽  
Gram Negative ◽  
Content Type ◽  
Flavobacterium Psychrophilum ◽  
Skin Ulcers ◽  
The Family

Flavobacterium psychrophilum is a Gram-negative, psychrophilic bacterium within the family Flavobacteriaceae. Here, we report the draft genome sequences of three F. psychrophilum strains isolated from skin ulcers of diseased ayu caught by tomozuri angling at three sites in the Kagami River in Japan.

scholarly journals Draft Genome Sequences of Escherichia coli Strains FP2 and FP3, Isolated from the Canada Goose (Branta canadensis)

2018 ◽  
Vol 7 (9) ◽  
Author(s):  
Allison L. Denny ◽  
Susan E. Arruda
Keyword(s):  
Escherichia Coli ◽  
Draft Genome ◽  
Branta Canadensis ◽  
Canada Goose ◽  
Genome Sequences ◽  
Content Type

Draft genomes of two strains of Escherichia coli, FP2 and FP3, isolated from the feces of the Canada goose (Branta canadensis), were sequenced. Genome sizes were 5.26 Mb with a predicted G+C content of 50.54% (FP2) and 5.07 Mb with a predicted G+C content of 50.41% (FP3).

scholarly journals First Draft Genome Sequences of Malaysian Clinical Isolates of Corynebacterium diphtheriae

2017 ◽  
Vol 5 (9) ◽  
Author(s):  
Norazah Ahmad ◽  
Shirley Yi Fen Hii ◽  
Mohd Khairul Nizam Mohd Khalid ◽  
Muhammad Adib Abd Wahab ◽  
Rohaidah Hashim ◽  
...  
Keyword(s):  
Draft Genome ◽  
Corynebacterium Diphtheriae ◽  
Clinical Isolates ◽  
Genome Sequences ◽  
Content Type

ABSTRACT Corynebacterium diphtheriae has caused multiple isolated diphtheria cases in Malaysia over the years. Here, we report the first draft genome sequences of 15 Malaysia C. diphtheriae clinical isolates collected from the years 1981 to 2016.

scholarly journals Draft Genome Sequences of Historical Strains of Coxiella burnetii Isolated from Cow’s Milk and a Goat Placenta

2017 ◽  
Vol 5 (39) ◽  
Author(s):  
Paul A. Beare ◽  
Brendan M. Jeffrey ◽  
Craig A. Martens ◽  
Talima Pearson ◽  
Robert A. Heinzen
Keyword(s):  
Coxiella Burnetii ◽  
Draft Genome ◽  
Sequence Type ◽  
Cow’S Milk ◽  
Genome Sequences ◽  
Content Type ◽  
Cow's Milk

ABSTRACT Here, we report draft genome sequences of historical strains of Coxiella burnetii derived from cow’s milk and the placenta of a goat that had aborted. The California and Ohio milk strains display a different sequence type than do contemporary milk strains.

scholarly journals Draft Genome Sequences of Four Clinical Legionella pneumophila Isolates from Ontario, Canada

2018 ◽  
Vol 6 (15) ◽  
pp. e00295-18
Author(s):  
Alexander Fortuna ◽  
Ricardo Ramnarine ◽  
Aimin Li ◽  
Nahuel Fittipaldi ◽  
Christine Frantz ◽  
...  
Keyword(s):  
Legionella Pneumophila ◽  
Genetic Relationships ◽  
Draft Genome ◽  
Genome Sequences ◽  
Content Type ◽  
Outbreak Investigations ◽  
Typing Methods

ABSTRACT Legionella pneumophila outbreak investigations require the development of reliable typing methods to better understand the genetic relationships of the isolates involved. Here, we report the draft genome sequences of four clinical Legionella pneumophila isolates obtained between 2000 and 2012 in Ontario, Canada.

scholarly journals Draft Genome Sequences of Two Janthinobacterium lividum Strains, Isolated from Pristine Groundwater Collected from the Oak Ridge Field Research Center

2017 ◽  
Vol 5 (26) ◽  
Author(s):  
Xiaoqin Wu ◽  
Adam M. Deutschbauer ◽  
Alexey E. Kazakov ◽  
Kelly M. Wetmore ◽  
Bryson A. Cwick ◽  
...  
Keyword(s):  
Draft Genome ◽  
Field Research ◽  
Research Center ◽  
Purple Pigment ◽  
Genome Sequences ◽  
Content Type ◽  
Oak Ridge ◽  
Background Site ◽  
Janthinobacterium Lividum ◽  
Groundwater Samples

ABSTRACT We present here the draft genome sequences of two Janthinobacterium lividum strains, GW456P and GW458P, isolated from groundwater samples collected from a background site at the Oak Ridge Field Research Center. Production of a purple pigment by these two strains was observed when grown on diluted (1/10) LB agar plates.

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