scholarly journals Draft Genome Sequence of Pseudomonas sp. Strain CCA1, Isolated from Leaf Soil

2016 ◽  
Vol 4 (6) ◽  
Author(s):  
Hironaga Akita ◽  
Zen-ichiro Kimura ◽  
Tamotsu Hoshino
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Pseudomonas Sp ◽  
Coding Sequences ◽  
Hiroshima Prefecture ◽  
Hiroshima City

Pseudomonas sp. strain CCA1 was isolated from leaf soil collected in Higashi-Hiroshima City in Hiroshima Prefecture, Japan. Here, we present a draft genome sequence of this strain. The genome consists of 24 contigs for a total of 6,993,992 bp, 8,917 predicted coding sequences, and a GC content of 67.2%.

scholarly journals Draft Genome Sequence of Burkholderia sp. Strain CCA53, Isolated from Leaf Soil

2016 ◽  
Vol 4 (4) ◽  
Author(s):  
Hironaga Akita ◽  
Zen-ichiro Kimura ◽  
Mohd Zulkhairi Mohd Yusoff ◽  
Nobutaka Nakashima ◽  
Tamotsu Hoshino
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Coding Sequences ◽  
Hiroshima Prefecture ◽  
Hiroshima City

Burkholderia sp. strain CCA53 was isolated from leaf soil collected in Higashi-Hiroshima City in Hiroshima Prefecture, Japan. Here, we present a draft genome sequence of this strain, which consists of a total of 4 contigs containing 6,647,893 bp, with a G+C content of 67.0% and comprising 9,329 predicted coding sequences.

scholarly journals Draft Genome Sequence of Alternaria alternata Isolated from Onion Leaves in South Africa

2016 ◽  
Vol 4 (5) ◽  
Author(s):  
Wubetu Bihon ◽  
Michele Cloete ◽  
Abe Shegro Gerrano ◽  
Dean Oelofse ◽  
Patrick Adebola
Keyword(s):  
South Africa ◽  
Genome Sequence ◽  
Alternaria Alternata ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Whole Genome ◽  
Coding Sequences

Alternaria alternata (Fr.) Keissler strain PPRI 21032 was isolated from onion leaves collected in Roodeplaat, Pretoria, South Africa. The whole genome of this strain was sequenced and produced a total of 33.12 Mb with a GC content of 50.9%. The whole genome comprises 11,701 predicted coding sequences.

scholarly journals Draft Genome Sequence of a Pseudomonas sp. Strain Carrying bla IMP-25 and bla VIM-2 Carbapenemase Genes from Hospital Sewage

2016 ◽  
Vol 4 (5) ◽  
Author(s):  
Yiyi Hu ◽  
Wenjing Wu ◽  
Yu Feng ◽  
Xiaoxia Zhang ◽  
Zhiyong Zong
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Trna Genes ◽  
Pseudomonas Sp ◽  
West China Hospital ◽  
Coding Sequences ◽  
West China ◽  
Hospital Sewage

Pseudomonas strain WCHP16 recovered from hospital sewage in West China Hospital, Chengdu, China was found to carry two carbapenemase genes bla IMP-25 and bla VIM-2 . Here, we report its 5.7-Mb draft genome sequence, comprising 141 contigs and an average 59.53% G+C content. The genome contained 5,504 coding sequences and 67 tRNA genes.

scholarly journals Draft Genome Sequence of Antarctic Pseudomonas sp. Strain KG01 with Full Potential for Biotechnological Applications

2015 ◽  
Vol 3 (4) ◽  
Author(s):  
María S. Pavlov ◽  
Felipe Lira ◽  
José L. Martínez ◽  
Jorge Olivares ◽  
Sergio H. Marshall
Keyword(s):  
Soil Sample ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Full Potential ◽  
Pseudomonas Sp ◽  
Antarctic Soil ◽  
Biotechnological Applications ◽  
Free Living ◽  
Coding Sequences

We report here the draft genome sequence of a free-living psychrotolerant, Pseudomonas sp. strain KG01, isolated from an Antarctic soil sample and displaying interesting antimicrobial and surfactant activities. The sequence is 6.3 Mb long and includes 5,648 predicted-coding sequences.

scholarly journals Draft Genome Sequence of Pseudomonas sp. Strain ICMP 22404, Isolated from Solanum lycopersicum Plants with Pith Necrosis Symptoms

2019 ◽  
Vol 8 (34) ◽  
Author(s):  
Luciano A. Rigano ◽  
Merje Toome-Heller ◽  
Katharina M. Hofer ◽  
Brett J. R. Alexander
Keyword(s):  
Genome Size ◽  
Solanum Lycopersicum ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Pseudomonas Sp ◽  
Coding Sequences ◽  
Content Type ◽  
Pith Necrosis

We report here the draft genome sequence of Pseudomonas sp. strain ICMP 22404, isolated from Solanum lycopersicum plants showing pith necrosis symptoms. The draft genome size is 6,686,400 bp, consisting of 86 contigs with a G+C content of 60.7% and containing 5,876 coding sequences, 60 tRNAs, and 11 rRNAs.

scholarly journals Draft Genome Sequence of Enterobacter oligotrophicus CCA3, Isolated from Leaf Soil

2021 ◽  
Vol 10 (4) ◽  
Author(s):  
Hironaga Akita ◽  
Yuya Itoiri ◽  
Noriyo Takeda ◽  
Zen-ichiro Kimura ◽  
Hiroyuki Inoue ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Hiroshima Prefecture

Enterobacter oligotrophicus CCA3 was isolated from leaf soil collected in Hiroshima Prefecture, Japan. Here, we report the draft genome sequence of E. oligotrophicus CCA3. The draft genome sequence of E. oligotrophicus CCA3 consists of 29 contigs of 4,425,100 bp, with a GC content of 54.2%.

scholarly journals Draft Genome Sequence of Pseudomonas sp. Strain T2.31D-1, Isolated from a Drilling Core Sample Obtained 414 Meters below Surface in the Iberian Pyrite Belt

2021 ◽  
Vol 10 (1) ◽  
Author(s):  
J. M. Martínez ◽  
C. Escudero ◽  
T. Leandro ◽  
G. Mateos ◽  
R. Amils
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Iberian Pyrite Belt ◽  
Core Sample ◽  
Rrna Operon ◽  
Draft Genome Sequence ◽  
Trna Genes ◽  
Pseudomonas Sp ◽  
Coding Sequences ◽  
Drilling Core

ABSTRACT We report the draft genome of Pseudomonas sp. strain T2.31D-1, which was isolated from a drilling core sample obtained 414 m below surface in the Iberian Pyrite Belt. The genome consists of a 4.7-Mb chromosome with 4,428 coding sequences, 1 rRNA operon, 59 tRNA genes, and a 31.8-kb plasmid.

scholarly journals Draft Genome Sequence of the UV-Resistant Antarctic Bacterium Sphingomonas sp. Strain UV9

2019 ◽  
Vol 8 (7) ◽  
Author(s):  
Juan J. Marizcurrena ◽  
Danilo Morales ◽  
Pablo Smircich ◽  
Susana Castro-Sowinski
Keyword(s):  
Genome Size ◽  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Coding Sequences ◽  
Antarctic Bacterium ◽  
A Genome ◽  
The Antarctic

We report the draft genome sequence of the Antarctic UV-resistant bacterium Sphingomonas sp. strain UV9. The strain has a genome size of 4.25 Mb, a 65.62% GC content, and 3,879 protein-coding sequences.

scholarly journals Draft Genome Sequence of Pseudomonas sp. Strain B1, Isolated from a Contaminated Sediment

2018 ◽  
Vol 6 (25) ◽  
Author(s):  
Ashish Pathak ◽  
Rajneesh Jaswal ◽  
Paul Stothard ◽  
Scott Brooks ◽  
Ashvini Chauhan
Keyword(s):  
Genome Sequence ◽  
Contaminated Soil ◽  
Draft Genome ◽  
Genomic Islands ◽  
Draft Genome Sequence ◽  
Pseudomonas Sp ◽  
Contaminated Sediment ◽  
Coding Sequences ◽  
Content Type ◽  
Biodegradative Genes

ABSTRACT The draft genome sequence of Pseudomonas sp. strain B1, isolated from a contaminated soil, is reported. The genome comprises 6,706,934 bases, 6,059 coding sequences, and 70 RNAs and has a G+C content of 60.3%. A suite of biodegradative genes, many located on genomic islands, were identified from strain B1, further enhancing our understanding of the versatile pseudomonads.

scholarly journals Draft Genome Sequence of Vibrio parahaemolyticus Strain VP14, Isolated from a Penaeus vannamei Culture Farm

2018 ◽  
Vol 6 (11) ◽  
Author(s):  
Ashok Kumar Jangam ◽  
T. Bhuvaneswari ◽  
A. Navaneeth Krishnan ◽  
Vinaya Kumar Katneni ◽  
Satheesha Avunje ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Vibrio Parahaemolyticus ◽  
Draft Genome ◽  
Gc Content ◽  
Southern India ◽  
Draft Genome Sequence ◽  
Penaeus Vannamei ◽  
Parahaemolyticus Strain ◽  
Coding Sequences ◽  
Content Type

ABSTRACT Here, we report the draft genome sequence of an isolate of Vibrio parahaemolyticus , VP14, recovered from the gut of Penaeus vannamei shrimp farmed in southern India. The genome of VP14 comprised 5,224,046 bp with a GC content of 45.3% and contained 5,326 genes, including 4,972 coding sequences.

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