scholarly journals Draft Genome Sequence of Alternaria alternata Isolated from Onion Leaves in South Africa

2016 ◽  
Vol 4 (5) ◽  
Author(s):  
Wubetu Bihon ◽  
Michele Cloete ◽  
Abe Shegro Gerrano ◽  
Dean Oelofse ◽  
Patrick Adebola
Keyword(s):  
South Africa ◽  
Genome Sequence ◽  
Alternaria Alternata ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Whole Genome ◽  
Coding Sequences

Alternaria alternata (Fr.) Keissler strain PPRI 21032 was isolated from onion leaves collected in Roodeplaat, Pretoria, South Africa. The whole genome of this strain was sequenced and produced a total of 33.12 Mb with a GC content of 50.9%. The whole genome comprises 11,701 predicted coding sequences.

scholarly journals Whole-Genome Sequence of a Mycobacterium goodii Isolate from a Pediatric Patient in South Africa

2018 ◽  
Vol 6 (3) ◽  
Author(s):  
Mushal Allam ◽  
Lavania Joseph ◽  
Farzana Ismail ◽  
Halima Said ◽  
Nazir A. Ismail ◽  
...  
Keyword(s):  
South Africa ◽  
Pediatric Patient ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Western Cape ◽  
Mycobacterial Species ◽  
Mycobacterium Goodii

ABSTRACT We describe here the draft genome sequence of a Mycobacterium goodii isolate from a pediatric patient in Western Cape, South Africa. To our knowledge, this is the second reported genome of this rapidly growing nontuberculous mycobacterial species.

scholarly journals Draft Genome Sequence of the UV-Resistant Antarctic Bacterium Sphingomonas sp. Strain UV9

2019 ◽  
Vol 8 (7) ◽  
Author(s):  
Juan J. Marizcurrena ◽  
Danilo Morales ◽  
Pablo Smircich ◽  
Susana Castro-Sowinski
Keyword(s):  
Genome Size ◽  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Coding Sequences ◽  
Antarctic Bacterium ◽  
A Genome ◽  
The Antarctic

We report the draft genome sequence of the Antarctic UV-resistant bacterium Sphingomonas sp. strain UV9. The strain has a genome size of 4.25 Mb, a 65.62% GC content, and 3,879 protein-coding sequences.

scholarly journals Draft Genome Sequence of Pseudomonas sp. Strain CCA1, Isolated from Leaf Soil

2016 ◽  
Vol 4 (6) ◽  
Author(s):  
Hironaga Akita ◽  
Zen-ichiro Kimura ◽  
Tamotsu Hoshino
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Pseudomonas Sp ◽  
Coding Sequences ◽  
Hiroshima Prefecture ◽  
Hiroshima City

Pseudomonas sp. strain CCA1 was isolated from leaf soil collected in Higashi-Hiroshima City in Hiroshima Prefecture, Japan. Here, we present a draft genome sequence of this strain. The genome consists of 24 contigs for a total of 6,993,992 bp, 8,917 predicted coding sequences, and a GC content of 67.2%.

scholarly journals Draft Genome Sequence of Aspergillus oryzae BP2-1, Isolated from Traditional Malted Rice in South Korea

2020 ◽  
Vol 9 (1) ◽  
Author(s):  
Jongbum Jeon ◽  
Jung A Kim ◽  
Sook-Young Park ◽  
Gye-Won Kim ◽  
Cheon-Seok Park ◽  
...  
Keyword(s):  
South Korea ◽  
Aspergillus Oryzae ◽  
Genome Sequence ◽  
Draft Genome ◽  
Starter Culture ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Content Type

The fungus Aspergillus oryzae strain BP2-1 was isolated from the traditional malted starter culture nuruk. We report here the draft whole-genome sequence of A. oryzae BP2-1, which is comprised of 14 scaffolds with a total length of 39,455,382 bp and a GC content of 47.13%.

scholarly journals First Draft Genome Sequence of Staphylococcus condimenti F-2 T

2016 ◽  
Vol 4 (3) ◽  
Author(s):  
Beiwen Zheng ◽  
Xinjun Hu ◽  
Xiawei Jiang ◽  
Ang Li ◽  
Jian Yao ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Genome Assembly ◽  
Draft Genome ◽  
Starter Culture ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Whole Genome Sequence ◽  
Whole Genome

This report describes the draft genome sequence of S. condimenti strain F-2 T (DSM 11674), a potential starter culture. The genome assembly comprised 2,616,174 bp with 34.6% GC content. To the best of our knowledge, this is the first documentation that reports the whole-genome sequence of S. condimenti.

scholarly journals Draft Genome Sequence of Vibrio parahaemolyticus Strain VP14, Isolated from a Penaeus vannamei Culture Farm

2018 ◽  
Vol 6 (11) ◽  
Author(s):  
Ashok Kumar Jangam ◽  
T. Bhuvaneswari ◽  
A. Navaneeth Krishnan ◽  
Vinaya Kumar Katneni ◽  
Satheesha Avunje ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Vibrio Parahaemolyticus ◽  
Draft Genome ◽  
Gc Content ◽  
Southern India ◽  
Draft Genome Sequence ◽  
Penaeus Vannamei ◽  
Parahaemolyticus Strain ◽  
Coding Sequences ◽  
Content Type

ABSTRACT Here, we report the draft genome sequence of an isolate of Vibrio parahaemolyticus , VP14, recovered from the gut of Penaeus vannamei shrimp farmed in southern India. The genome of VP14 comprised 5,224,046 bp with a GC content of 45.3% and contained 5,326 genes, including 4,972 coding sequences.

scholarly journals Whole-Genome Sequence of High Salt and Heavy Metal-Tolerant Bacillus stratosphericus Strain 5Co, Isolated from Lichen Usnea florida in Central Florida, United States

2017 ◽  
Vol 5 (24) ◽  
Author(s):  
Pushpa Lata ◽  
Subramaniam S. Govindarajan ◽  
Feng Qi ◽  
Jian-Liang Li ◽  
Santosh K. Maurya ◽  
...  
Keyword(s):  
United States ◽  
Heavy Metal ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Coding Sequences ◽  
Content Type ◽  
Central Florida

ABSTRACT Bacillus stratosphericus strain 5Co was isolated from lichen Usnea florida in central Florida, United States. Here, we report a draft genome sequence of this strain, which consists of 159 contigs spanning 3,628,496 bp, with a G+C content of 41.3% and comprises 3,729 predicted coding sequences.

scholarly journals Draft Genome Sequence of Phyllobacterium endophythicum mTS5, Isolated from Lupinus micranthus in Tunisia

2019 ◽  
Vol 8 (45) ◽  
Author(s):  
Zoé Waller ◽  
Mokhtar Rejili ◽  
Mohamed Mars ◽  
Andreas Brachmann ◽  
Macarena Marín
Keyword(s):  
Genome Sequence ◽  
Root Nodule ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Coding Sequences ◽  
Content Type

We report here the draft genome sequence of Phyllobacterium endophyticum mTS5, isolated from a Lupinus micranthus root nodule. The genome consists of 5,454,168 bp, with a GC content of 57%, and contains 5,676 protein-coding sequences.

scholarly journals Draft Genome Sequence of Entomopathogenic Brevibacillus laterosporus Strain Lak 1210, an Alkaliphilic Chitin Degrader

2017 ◽  
Vol 5 (46) ◽  
Author(s):  
Lakshmi Prasanna ◽  
Tushar Ranjan Moharana ◽  
Nizamuddin Sheikh ◽  
Veerabhadra Rao Arravapalli ◽  
Thangaraj Kumaraswamy ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Phytopathogenic Fungi ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Coding Sequences ◽  
Content Type ◽  
Brevibacillus Laterosporus ◽  
Mangrove Soil

ABSTRACT We announce here the draft genome sequence of Brevibacillus laterosporus strain Lak 1210, isolated from mangrove soil. This alkaliphilic strain is an efficient chitin degrader and has the ability to control insects and inhibit phytopathogenic fungi. The assembly consists of 5,082,926 bp, with 4,321 protein-coding sequences and a GC content of 41.15%.

scholarly journals Draft Genome Sequence of a Novel “Candidatus Liberibacter” Species Detected in a Zanthoxylum Species from Bhutan

2020 ◽  
Vol 9 (40) ◽  
Author(s):  
Grant A. Chambers ◽  
Nerida J. Donovan ◽  
Daniel R. Bogema ◽  
Namgay Om ◽  
George A. C. Beattie ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Gc Content ◽  
Draft Genome Sequence ◽  
Nucleotide Identity ◽  
Average Nucleotide Identity ◽  
Coding Sequences ◽  
Total Length ◽  
Candidatus Liberibacter ◽  
Unidentified Species

ABSTRACT The draft genome sequence of a novel “Candidatus Liberibacter” species detected in an unidentified species of Zanthoxylum (Rutaceae) collected in Bhutan is reported. The total length is 1,408,989 bp with 1,169 coding sequences in 96 contigs, a GC content of 37.3%, and 76 to 77% average nucleotide identity with several other “Ca. Liberibacter” species.

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