scholarly journals Inactivation of gltB Abolishes Expression of the Assimilatory Nitrate Reductase Gene (nasB) in Pseudomonas putida KT2442

2000 ◽  
Vol 182 (12) ◽  
pp. 3368-3376 ◽  
Author(s):  
Leo Eberl ◽  
Aldo Ammendola ◽  
Michael H. Rothballer ◽  
Michael Givskov ◽  
Claus Sternberg ◽  
...  
Keyword(s):  
Nitrate Reductase ◽  
Pseudomonas Putida ◽  
Nitrogen Starvation ◽  
Nitrate Assimilation ◽  
Glutamate Synthase ◽  
Nitrogen Sources ◽  
Nucleotide Sequence Analysis ◽  
Nitrate Reductase Gene ◽  
Physiological Characterization ◽  
Reductase Gene

ABSTRACT By using mini-Tn5 transposon mutagenesis, random transcriptional fusions of promoterless bacterial luciferase,luxAB, to genes of Pseudomonas putida KT2442 were generated. Insertion mutants that responded to ammonium deficiency by induction of bioluminescence were selected. The mutant that responded most strongly was genetically analyzed and is demonstrated to bear the transposon within the assimilatory nitrate reductase gene (nasB) of P. putida KT2442. Genetic evidence as well as sequence analyses of the DNA regions flanking nasBsuggest that the genes required for nitrate assimilation are not clustered. We isolated three second-site mutants in which induction ofnasB expression was completely abolished under nitrogen-limiting conditions. Nucleotide sequence analysis of the chromosomal junctions revealed that in all three mutants the secondary transposon had inserted at different sites in the gltB gene of P. putida KT2442 encoding the major subunit of the glutamate synthase. A detailed physiological characterization of thegltB mutants revealed that they are unable to utilize a number of potential nitrogen sources, are defective in the ability to express nitrogen starvation proteins, display an aberrant cell morphology under nitrogen-limiting conditions, and are impaired in the capacity to survive prolonged nitrogen starvation periods.

scholarly journals Arabidopsis Growth-Promotion and Root Architecture Responses to the Beneficial Rhizobacterium Phyllobacterium brassicacearum Strain STM196 Are Independent of the Nitrate Assimilatory Pathway

Plants ◽  
2022 ◽  
Vol 11 (1) ◽  
pp. 128
Author(s):  
Maya Kechid ◽  
Guilhem Desbrosses ◽  
Lydia Gamet ◽  
Loren Castaings ◽  
Fabrice Varoquaux ◽  
...  
Keyword(s):  
Nitrate Reductase ◽  
Growth Promotion ◽  
Lateral Roots ◽  
Nitrate Assimilation ◽  
Transcript Level ◽  
Nitrate Reductase Gene ◽  
Reductase Gene ◽  
Plant Growth Promoting ◽  
Similar Growth ◽  
Nitrate Transporters

Phyllobacterium brassicacearum STM196, a plant growth-promoting rhizobacterium isolated from roots of oilseed rape, stimulates Arabidopsis growth. We have previously shown that the NRT2.5 and NRT2.6 genes are required for this growth promotion response. Since these genes are members of the NRT2 family of nitrate transporters, the nitrogen assimilatory pathway could be involved in growth promotion by STM196. We address this hypothesis using two nitrate reductase mutants, G5 deleted in the major nitrate reductase gene NIA2 and G′4-3 altered in both NIA1 and NIA2 genes. Both mutants had a reduced growth rate and STM196 failed to increase their biomass production on a medium containing NO3− as the sole nitrogen source. However, they both displayed similar growth promotion by STM196 when grown on an NH4+ medium. STM196 was able to stimulate lateral roots development of the mutants under both nutrition conditions. Altogether, our results indicate that the nitrate assimilatory metabolism is not a primary target of STM196 interaction and is not involved in the root developmental response. The NIA1 transcript level was reduced in the shoots of nrt2.5 and nrt2.6 mutants suggesting a role for this nitrate reductase isoform independently from its role in nitrate assimilation.

scholarly journals Reticulate evolution in eukaryotes: origin and evolution of the nitrate assimilation pathway

2018 ◽  
Author(s):  
Eduard Ocaña-Pallarès ◽  
Sebastián R. Najle ◽  
Claudio Scazzocchio ◽  
Iñaki Ruiz-Trillo
Keyword(s):  
Nitrate Reductase ◽  
Gene Fusion ◽  
Evolutionary History ◽  
Transcriptional Control ◽  
Genetic Material ◽  
Nitrate Assimilation ◽  
Nitrogen Sources ◽  
Reticulate Evolution ◽  
Origin And Evolution ◽  
Ideal Object

AbstractGenes and genomes can evolve through interchanging genetic material, this leading to reticular evolutionary patterns. However, the importance of reticulate evolution in eukaryotes, and in particular of horizontal gene transfer (HGT), remains controversial. Given that metabolic pathways with taxonomically-patchy distributions can be indicative of HGT events, the eukaryotic nitrate assimilation pathway is an ideal object of investigation, as previous results revealed a patchy distribution and suggested one crucial HGT event. We studied the evolution of this pathway through both multi-scale bioinformatic and experimental approaches. Our taxon-rich genomic screening shows this pathway to be present in more lineages than previously proposed and that nitrate assimilation is restricted to autotrophs and to distinct osmotrophic groups. Our phylogenies show a pervasive role of HGT, with three bacterial transfers contributing to the pathway origin, and at least seven well-supported transfers between eukaryotes. Our results, based on a larger dataset, differ from the previously proposed transfer of a nitrate assimilation cluster from Oomycota (Stramenopiles) to Dikarya (Fungi, Opisthokonta). We propose a complex HGT path involving at least two cluster transfers between Stramenopiles and Opisthokonta. We also found that gene fusion played an essential role in this evolutionary history, underlying the origin of the canonical eukaryotic nitrate reductase, and of a novel nitrate reductase in Ichthyosporea (Opisthokonta). We show that the ichthyosporean pathway, including this novel nitrate reductase, is physiologically active and transcriptionally co-regulated, responding to different nitrogen sources; similarly to distant eukaryotes with independent HGT-acquisitions of the pathway. This indicates that this pattern of transcriptional control evolved convergently in eukaryotes, favoring the proper integration of the pathway in the metabolic landscape. Our results highlight the importance of reticulate evolution in eukaryotes, by showing the crucial contribution of HGT and gene fusion in the evolutionary history of the nitrate assimilation pathway.

scholarly journals Cloning of a third nitrate reductase gene from the cyanobacterium Anacystis nidulans R2 using a shuttle cosmid library

Gene ◽  
1984 ◽  
Vol 31 (1-3) ◽  
pp. 109-116 ◽  
Author(s):  
C.J. Kuhlemeier ◽  
V.J.P. Teeuwsen ◽  
M.J.T. Janssen ◽  
G.A. van Arkel
Keyword(s):  
Nitrate Reductase ◽  
Anacystis Nidulans ◽  
Cosmid Library ◽  
Nitrate Reductase Gene ◽  
Reductase Gene

scholarly journals In Vivo Regulation of Glutamine Synthetase Activity in the Marine Chlorophyll b-Containing CyanobacteriumProchlorococcus sp. Strain PCC 9511 (Oxyphotobacteria)

2001 ◽  
Vol 67 (5) ◽  
pp. 2202-2207 ◽  
Author(s):  
Sabah El Alaoui ◽  
Jesús Diez ◽  
Lourdes Humanes ◽  
Fermı́n Toribio ◽  
Frédéric Partensky ◽  
...  
Keyword(s):  
Glutamine Synthetase ◽  
Nitrogen Starvation ◽  
Glutamate Synthase ◽  
Nitrogen Sources ◽  
Synthetase Activity ◽  
Glutamine Synthetase Activity ◽  
Protein Determination ◽  
Physiological Regulation ◽  
Gs Protein

ABSTRACT The physiological regulation of glutamine synthetase (GS; EC6.3.1.2 ) in the axenic Prochlorococcus sp. strain PCC 9511 was studied. GS activity and antigen concentration were measured using the transferase and biosynthetic assays and the electroimmunoassay, respectively. GS activity decreased when cells were subjected to nitrogen starvation or cultured with oxidized nitrogen sources, which proved to be nonusable forProchlorococcus growth. The GS activity in cultures subjected to long-term phosphorus starvation was lower than that in equivalent nitrogen-starved cultures. Azaserine, an inhibitor of glutamate synthase, provoked an increase in enzymatic activity, suggesting that glutamine is not involved in GS regulation. Darkness did not affect GS activity significantly, while the addition of diuron provoked GS inactivation. GS protein determination showed that azaserine induces an increase in the concentration of the enzyme. The unusual responses to darkness and nitrogen starvation could reflect adaptation mechanisms of Prochlorococcus for coping with a light- and nutrient-limited environment.

Sign in / Sign up

Export Citation Format

Share Document