scholarly journals Complete Genome Sequence of Vibrio coralliilyticus OCN008

2020 ◽  
Vol 9 (30) ◽  
Author(s):  
Victoria N. Lydick ◽  
Douglas B. Rusch ◽  
Blake Ushijima ◽  
Julia C. van Kessel
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Marine Bacterium ◽  
Sequencing Data ◽  
Content Type ◽  
Complete Sequences ◽  
Vibrio Coralliilyticus ◽  
Circular Chromosomes ◽  
Illumina Sequencing Data

ABSTRACT Here, we report the complete genome sequence of Vibrio coralliilyticus OCN008, a marine bacterium that infects reef-building coral. Previous sequencing efforts yielded an incomplete sequence (210 contigs). We used Nanopore and Illumina sequencing data to obtain complete sequences of the two circular chromosomes (3.48 and 1.91 Mb) and one megaplasmid (244.69 kb).

scholarly journals Complete Genome Sequence of the Autotrophic Acetogen Clostridium formicaceticum DSM 92T Using Nanopore and Illumina Sequencing Data

2017 ◽  
Vol 5 (21) ◽  
Author(s):  
Michael M. Karl ◽  
Anja Poehlein ◽  
Frank R. Bengelsdorf ◽  
Rolf Daniel ◽  
Peter Dürre
Keyword(s):  
Carbon Monoxide ◽  
Genome Sequence ◽  
Illumina Sequencing ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Sequencing Data ◽  
Circular Chromosome ◽  
Content Type ◽  
Illumina Sequencing Data

ABSTRACT Here, we report the closed genome sequence of Clostridium formicaceticum, an Rnf- and cytochrome-containing autotrophic acetogen that is able to convert carbon monoxide to acetate using the Wood-Ljungdahl pathway. The genome consists of a circular chromosome (4.59 Mb).

scholarly journals Complete Genome Sequence of Vibrio coralliilyticus RE22, a Marine Bacterium Pathogenic toward Larval Shellfish

2018 ◽  
Vol 7 (17) ◽  
Author(s):  
Gary P. Richards ◽  
Brewster F. Kingham ◽  
Olga Shevchenko ◽  
Michael A. Watson ◽  
David S. Needleman
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Marine Bacterium ◽  
Larval Mortality ◽  
Content Type ◽  
High Larval Mortality ◽  
Vibrio Coralliilyticus ◽  
Bivalve Shellfish

Vibrio coralliilyticus RE22 is an indigenous marine pathogen that infects larval bivalve shellfish. This strain is particularly problematic in oyster hatcheries, where it causes high larval mortality.

scholarly journals Complete Genome Sequence of the Marine Bacterium Erythrobacter flavus Strain KJ5

2019 ◽  
Vol 8 (13) ◽  
Author(s):  
Yu Kanesaki ◽  
Edi Setiyono ◽  
Delianis Pringgenies ◽  
Ryota Moriuchi ◽  
Tatas H. P. Brotosudarmo ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Marine Bacterium ◽  
Hard Coral ◽  
Content Type

Erythrobacter flavus strain KJ5 (formerly called Erythrobacter sp. strain KJ5) is a yellowish marine bacterium that was isolated from a hard coral in the Karimunjawa Islands of Indonesia.

scholarly journals Complete Genome Sequence of Burkholderia cenocepacia CR318, a Phosphate-Solubilizing Bacterium Isolated from Corn Root

2017 ◽  
Vol 5 (23) ◽  
Author(s):  
Filip Zekic ◽  
Brian Weselowski ◽  
Ze-Chun Yuan
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Phosphate Solubilization ◽  
Burkholderia Cenocepacia ◽  
Ecological Sustainability ◽  
Content Type ◽  
Phosphate Solubilizing ◽  
Circular Chromosomes ◽  
Insight Into

ABSTRACT Here, we report the complete genome sequence of the phosphate-solubilizing bacterium Burkholderia cenocepacia CR318, consisting of three circular chromosomes of 3,511,146 bp, 3,097,552 bp, and 1,056,069 bp. The data presented will facilitate further insight into the mechanisms of phosphate solubilization and its application for agricultural and ecological sustainability.

scholarly journals Complete Genome Sequence of Rubrobacter xylanophilus Strain AA3-22, Isolated from Arima Onsen in Japan

2019 ◽  
Vol 8 (34) ◽  
Author(s):  
Natsuki Tomariguchi ◽  
Kentaro Miyazaki
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Hot Spring ◽  
Sequencing Data ◽  
Short Read ◽  
Content Type ◽  
Short Read Sequencing ◽  
Oxford Nanopore ◽  
Long Read

Rubrobacter xylanophilus strain AA3-22, belonging to the phylum Actinobacteria, was isolated from nonvolcanic Arima Onsen (hot spring) in Japan. Here, we report the complete genome sequence of this organism, which was obtained by combining Oxford Nanopore long-read and Illumina short-read sequencing data.

scholarly journals Complete Genome Sequence of Vibrio natriegens Phage Phriendly

2019 ◽  
Vol 8 (40) ◽  
Author(s):  
James Clark ◽  
Adey Awah ◽  
Russell Moreland ◽  
Mei Liu ◽  
Jason J. Gill ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Genome Annotation ◽  
Complete Genome ◽  
Marine Bacterium ◽  
Content Type ◽  
Fast Growing ◽  
Sequence Identity

Vibrio natriegens is a fast-growing marine bacterium of interest for biotechnology applications. Here, we describe the isolation and genome annotation of V. natriegens podophage Phriendly. Among the 72 predicted coding genes and 1 tRNA, Phriendly’s 50,218-bp genome has low sequence identity to known phages.

scholarly journals Complete Genome Sequence of Streptococcus mitis Strain Nm-65, Isolated from a Patient with Kawasaki Disease

2021 ◽  
Vol 10 (1) ◽  
Author(s):  
Atsushi Tabata ◽  
Hisashi Ohkuni ◽  
Yasuhiko Itoh ◽  
Yoshitaka Fukunaga ◽  
Toshifumi Tomoyasu ◽  
...  
Keyword(s):  
Kawasaki Disease ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Next Generation Sequencing Data ◽  
Tooth Surface ◽  
Data Sets ◽  
Sequencing Data ◽  
Streptococcus Mitis ◽  
Content Type

ABSTRACT Streptococcus mitis Nm-65 is a human commensal streptococcal strain of the mitis group that was isolated from the tooth surface of a patient with Kawasaki disease. The complete genome sequence of Nm-65 was obtained by means of hybrid assembly, using two next-generation sequencing data sets. The final assembly size was 2,085,837 bp, with 2,039 coding sequences.

scholarly journals Complete Genome Sequence of Vibrio rotiferianus Strain AM7

2020 ◽  
Vol 9 (21) ◽  
Author(s):  
Kentaro Miyazaki ◽  
Apirak Wiseschart ◽  
Kusol Pootanakit ◽  
Kei Kitahara
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
The Novel ◽  
Sequencing Data ◽  
Short Read ◽  
Content Type ◽  
Short Read Sequencing ◽  
Oxford Nanopore ◽  
Long Read

ABSTRACT We isolated the novel strain Vibrio rotiferianus AM7 from the shell of an abalone. In this article, we report the complete genome sequence of this organism, which was obtained by combining Oxford Nanopore long-read and Illumina short-read sequencing data.

scholarly journals Complete Genome Sequence of Allorhizobium vitis Strain K306, the Causal Agent of Grapevine Crown Gall

2020 ◽  
Vol 9 (29) ◽  
Author(s):  
Hangwei Xi ◽  
Maarten Ryder ◽  
Iain R. Searle
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Crown Gall ◽  
Complete Genome ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
Allorhizobium Vitis ◽  
Grapevine Crown Gall ◽  
Circular Chromosomes

ABSTRACT Here, we present the annotated complete genome sequence of Allorhizobium vitis K306, a phytopathogenic strain causing crown gall of grapevine. The A. vitis K306 genome is 5.79 Mb long with 5,199 predicted protein-coding genes and contains 2 circular chromosomes of 3.8 Mb and 1.1 Mb and 2 plasmids, namely, pTiK306 and pTrK306, that are 262 kb and 581 kb, respectively.

scholarly journals Complete Genome Sequence of Burkholderia contaminans SK875, Isolated from the Respiratory Tract of a Pig in the Republic of Korea

2020 ◽  
Vol 9 (27) ◽  
Author(s):  
Hae-In Jung ◽  
Sang-Won Lee ◽  
Soo-Ki Kim
Keyword(s):  
Respiratory Tract ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Republic Of Korea ◽  
Content Type ◽  
Burkholderia Contaminans ◽  
The Republic ◽  
Circular Chromosomes

ABSTRACT Burkholderia contaminans SK875 was isolated from the respiratory tract of a pig in the Republic of Korea. Here, we report the genome of B. contaminans SK875, which consists of three circular chromosomes and one plasmid of 8,596,045 bp with 7,727 genes.

Sign in / Sign up

Export Citation Format

Share Document