scholarly journals Complete Genome Sequence of Vibrio coralliilyticus RE22, a Marine Bacterium Pathogenic toward Larval Shellfish

2018 ◽  
Vol 7 (17) ◽  
Author(s):  
Gary P. Richards ◽  
Brewster F. Kingham ◽  
Olga Shevchenko ◽  
Michael A. Watson ◽  
David S. Needleman
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Marine Bacterium ◽  
Larval Mortality ◽  
Content Type ◽  
High Larval Mortality ◽  
Vibrio Coralliilyticus ◽  
Bivalve Shellfish

Vibrio coralliilyticus RE22 is an indigenous marine pathogen that infects larval bivalve shellfish. This strain is particularly problematic in oyster hatcheries, where it causes high larval mortality.

scholarly journals Complete Genome Sequence of Vibrio coralliilyticus OCN008

2020 ◽  
Vol 9 (30) ◽  
Author(s):  
Victoria N. Lydick ◽  
Douglas B. Rusch ◽  
Blake Ushijima ◽  
Julia C. van Kessel
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Marine Bacterium ◽  
Sequencing Data ◽  
Content Type ◽  
Complete Sequences ◽  
Vibrio Coralliilyticus ◽  
Circular Chromosomes ◽  
Illumina Sequencing Data

ABSTRACT Here, we report the complete genome sequence of Vibrio coralliilyticus OCN008, a marine bacterium that infects reef-building coral. Previous sequencing efforts yielded an incomplete sequence (210 contigs). We used Nanopore and Illumina sequencing data to obtain complete sequences of the two circular chromosomes (3.48 and 1.91 Mb) and one megaplasmid (244.69 kb).

scholarly journals Complete Genome Sequence of the Marine Bacterium Erythrobacter flavus Strain KJ5

2019 ◽  
Vol 8 (13) ◽  
Author(s):  
Yu Kanesaki ◽  
Edi Setiyono ◽  
Delianis Pringgenies ◽  
Ryota Moriuchi ◽  
Tatas H. P. Brotosudarmo ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Marine Bacterium ◽  
Hard Coral ◽  
Content Type

Erythrobacter flavus strain KJ5 (formerly called Erythrobacter sp. strain KJ5) is a yellowish marine bacterium that was isolated from a hard coral in the Karimunjawa Islands of Indonesia.

scholarly journals Complete Genome Sequence of Vibrio natriegens Phage Phriendly

2019 ◽  
Vol 8 (40) ◽  
Author(s):  
James Clark ◽  
Adey Awah ◽  
Russell Moreland ◽  
Mei Liu ◽  
Jason J. Gill ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Genome Annotation ◽  
Complete Genome ◽  
Marine Bacterium ◽  
Content Type ◽  
Fast Growing ◽  
Sequence Identity

Vibrio natriegens is a fast-growing marine bacterium of interest for biotechnology applications. Here, we describe the isolation and genome annotation of V. natriegens podophage Phriendly. Among the 72 predicted coding genes and 1 tRNA, Phriendly’s 50,218-bp genome has low sequence identity to known phages.

scholarly journals Complete Genome Sequence of the Arcobacter canalis Type Strain LMG 29148

2019 ◽  
Vol 8 (44) ◽  
Author(s):  
William G. Miller ◽  
Emma Yee ◽  
Mary H. Chapman
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Type Strain ◽  
Marine Bacterium ◽  
Whole Genome Sequence ◽  
Whole Genome ◽  
Content Type

Arcobacter canalis was originally recovered from shellfish and from a sewage-contaminated canal. Arcobacter canalis is closely related to the marine bacterium Arcobacter marinus. This study describes the complete whole-genome sequence of the A. canalis type strain LMG 29148 (=F138-33T; =CECT 8984T), which was recovered from oysters.

scholarly journals Complete Genome Sequence of Mameliella alba Strain KU6B, a Cyclohexylamine-Utilizing Marine Bacterium

2020 ◽  
Vol 9 (19) ◽  
Author(s):  
Taisei Yamamoto ◽  
Yaxuan Liu ◽  
Yoshie Hasegawa ◽  
Hiroaki Iwaki
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Marine Bacterium ◽  
Circular Chromosome ◽  
Content Type ◽  
Boso Peninsula

Here, we report the complete genome sequence of Mameliella alba strain KU6B, a bacterium newly isolated from seawater of Boso Peninsula in Japan that is capable of utilizing cyclohexylamine. The complete genome contained a 5,386,988-bp circular chromosome and three circular plasmids of 256,516, 112,434, and 76,727 bp.

scholarly journals Complete Genome Sequence of Croceibacter Bacteriophage P2559S

2012 ◽  
Vol 86 (16) ◽  
pp. 8912-8913 ◽  
Author(s):  
Ilnam Kang ◽  
Dongmin Kang ◽  
Jang-Cheon Cho
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Marine Bacterium ◽  
Republic Of Korea ◽  
Sargasso Sea ◽  
Primary Producers ◽  
Content Type ◽  
The Family ◽  
The Republic

Croceibacter atlanticusHTCC2559T, a marine bacterium isolated from the Sargasso Sea, is a phylogenetically unique member of the familyFlavobacteriaceae. Strain HTCC2559Tpossesses genes related to interaction with primary producers, which makes studies on bacteriophages infecting the strain interesting. Here we report the genome sequence of bacteriophage P2559S, which was isolated off the coast of the Republic of Korea and lytically infects HTCC2559T. Many genes predicted in the P2559S genome had their homologs inBacteroidesphages.

scholarly journals Complete Genome Sequence of Vibrio coralliilyticus 58, Isolated from Pacific Oyster (Crassostrea gigas) Larvae

2017 ◽  
Vol 5 (23) ◽  
Author(s):  
Hyoun Joong Kim ◽  
Ji Hyung Kim ◽  
Jin Woo Jun ◽  
Sib Sankar Giri ◽  
Cheng Chi ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Crassostrea Gigas ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Pacific Oyster ◽  
Content Type ◽  
Vibrio Coralliilyticus

ABSTRACT We report here the complete genome of Vibrio coralliilyticus strain 58, which was originally isolated from inactive Pacific oyster (Crassostrea gigas) larvae in Japan. The assembled genome consisted of two chromosomes and one plasmid. These data will provide valuable information and important insights into the biodiversity of this organism.

scholarly journals Complete Genome Sequence of Malassezia restricta CBS 7877, an Opportunist Pathogen Involved in Dandruff and Seborrheic Dermatitis

2019 ◽  
Vol 8 (6) ◽  
Author(s):  
Stanislas C. Morand ◽  
Morgane Bertignac ◽  
Agnes Iltis ◽  
Iris C. R. M. Kolder ◽  
Walter Pirovano ◽  
...  
Keyword(s):  
Human Skin ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Seborrheic Dermatitis ◽  
Skin Microbiome ◽  
Basidiomycetous Yeasts ◽  
Content Type ◽  
Opportunist Pathogen ◽  
Malassezia Restricta

Malassezia restricta, one of the predominant basidiomycetous yeasts present on human skin, is involved in scalp disorders. Here, we report the complete genome sequence of the lipophilic Malassezia restricta CBS 7877 strain, which will facilitate the study of the mechanisms underlying its commensal and pathogenic roles within the skin microbiome.

scholarly journals Complete Genome Sequence of Cupriavidus necator H16 (DSM 428)

2019 ◽  
Vol 8 (37) ◽  
Author(s):  
Gareth T. Little ◽  
Muhammad Ehsaan ◽  
Christian Arenas-López ◽  
Kamran Jawed ◽  
Klaus Winzer ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Cupriavidus Necator ◽  
Rrna Genes ◽  
Trna Genes ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
Cupriavidus Necator H16

The hydrogen-utilizing strain Cupriavidus necator H16 (DSM 428) was sequenced using a combination of PacBio and Illumina sequencing. Annotation of this strain reveals 6,543 protein-coding genes, 263 pseudogenes, 64 tRNA genes, and 15 rRNA genes.

scholarly journals Complete Genome Sequence of Stenotrophomonas Phage Mendera

2020 ◽  
Vol 9 (1) ◽  
Author(s):  
Kameron D. Garza ◽  
Heather Newkirk ◽  
Russell Moreland ◽  
Carlos F. Gonzalez ◽  
Mei Liu ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Stenotrophomonas Maltophilia ◽  
Human Pathogen ◽  
Base Pairs ◽  
Content Type ◽  
Genomic Annotation ◽  
Opportunistic Human Pathogen

Stenotrophomonas maltophilia is an emerging opportunistic human pathogen. In this report, we describe the isolation and genomic annotation of the S. maltophilia-infecting bacteriophage Mendera. A myophage of 159,961 base pairs, Mendera is T4-like and related most closely to Stenotrophomonas phage IME-SM1.

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