scholarly journals Draft Genome Sequence of Salmonella bongori N19-781, a Clinical Strain from a Patient with Diarrhea

2019 ◽  
Vol 8 (29) ◽  
Author(s):  
Marc J. A. Stevens ◽  
Nicole Cernela ◽  
Andrea Müller ◽  
Roger Stephan ◽  
Guido Bloemberg
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Clinical Strain ◽  
Content Type

The genome of Salmonella bongori N19-781, a strain isolated from a patient with diarrhea, was sequenced. It consists of a 4.5-Mbp chromosome.

scholarly journals Draft Genome Sequence of a High-Level Colistin-Resistant Clinical Strain of the Enterobacter cloacae Complex

2017 ◽  
Vol 5 (14) ◽  
Author(s):  
Ji Lin ◽  
Feifei Zhao ◽  
Yu Feng ◽  
Zhiyong Zong
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Enterobacter Cloacae ◽  
Draft Genome Sequence ◽  
Clinical Strain ◽  
Trna Genes ◽  
Coding Sequences ◽  
Content Type ◽  
High Level ◽  
Enterobacter Cloacae Complex

ABSTRACT Strain WCHECl-C4 of the Enterobacter cloacae complex, recovered from the blood of a patient with peritonitis, was high-level resistant to colistin. Here, we report its 5.1-Mb draft genome sequence, comprising 92 contigs with an average 55.74% G+C content. The genome contained 4,783 coding sequences and 68 tRNA genes.

scholarly journals Draft Genome Sequence of a Polymyxin-Resistant Klebsiella pneumoniae Clinical Strain Carrying mcr-8.1 and blaNDM-5

2021 ◽  
Vol 10 (12) ◽  
Author(s):  
Na Pei ◽  
Zijuan Jian ◽  
Yirui Liu ◽  
Tianzhu Liang ◽  
Wenen Liu ◽  
...  
Keyword(s):  
Klebsiella Pneumoniae ◽  
Global Health ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Clinical Strain ◽  
Content Type ◽  
Major Threat ◽  
Carbapenem Resistant

ABSTRACT Carbapenem-resistant Klebsiella pneumoniae (CRKP) is a major threat to global health. Here, we report the draft genome sequence of a Klebsiella pneumoniae clinical strain carrying mcr-8.1 and blaNDM-5.

scholarly journals Draft Genome Sequence of Providencia rettgeri APW139_S1, an NDM-18-Producing Clinical Strain Originating from Hospital Effluent in South Africa

2019 ◽  
Vol 8 (21) ◽  
Author(s):  
Noyise B. Ntshobeni ◽  
Mushal Allam ◽  
Arshad Ismail ◽  
Daniel G. Amoako ◽  
Sabiha Y. Essack ◽  
...  
Keyword(s):  
South Africa ◽  
Genome Sequence ◽  
Draft Genome ◽  
Opportunistic Pathogen ◽  
Draft Genome Sequence ◽  
Clinical Strain ◽  
New Delhi ◽  
Providencia Rettgeri ◽  
Content Type ◽  
Hospital Effluent

Providencia rettgeri is an opportunistic pathogen implicated in various clinical infections. Here, we report the genome sequence of a Providencia rettgeri strain isolated from hospital effluent in South Africa, which harbors the New Delhi metallo-β-lactamase (NDM) variant 18 gene (bla NDM-18).

scholarly journals Draft Genome Sequence of a Colistin-Resistant Klebsiella pneumoniae Clinical Strain Carrying the blaNDM-1 Carbapenemase Gene

2017 ◽  
Vol 5 (7) ◽  
Author(s):  
Zhihong Yao ◽  
Yu Feng ◽  
Ji Lin ◽  
Zhiyong Zong
Keyword(s):  
Klebsiella Pneumoniae ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Clinical Strain ◽  
Trna Genes ◽  
Coding Sequences ◽  
Content Type ◽  
Carbapenemase Gene

ABSTRACT Klebsiella pneumoniae strain WCHKP1845, recovered from the sputum of a patient with pneumonia, was resistant to colistin and carried the carbapenemase gene bla NDM-1. Here, we report its 5.4-Mb draft genome sequence, comprising 140 contigs with an average 57.33% G+C content. The genome contains 5,118 coding sequences and 88 tRNA genes.

scholarly journals Draft Genome Sequence of Clinical Strain TANI1 of Streptococcus suis Serotype 5 Isolated from a Bacteremia Patient in Japan

2017 ◽  
Vol 5 (18) ◽  
Author(s):  
Haruno Yoshida ◽  
Takayuki Wada ◽  
Daisuke Taniyama ◽  
Takashi Takahashi
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Streptococcus Suis ◽  
Draft Genome Sequence ◽  
Clinical Strain ◽  
Economic Damage ◽  
Content Type ◽  
Swine Pathogen ◽  
Serotype 5 ◽  
Suis Serotype

ABSTRACT Streptococcus suis is a swine pathogen that causes severe economic damage to the porcine industry. It occasionally evokes zoonotic infection in humans. Here, we report a draft genome sequence of a S. suis serotype 5 strain isolated from a bacteremia patient that was reported by Taniyama et al. (D. Taniyama, M. Sakurai, T. Sakai, T. Kikuchi, and T. Takahashi, IDCases 6:36–38, 2016, https://doi.org/10.1016/j.idcr.2016.09.011 ).

scholarly journals Genome Sequence of Listeria monocytogenes 2542, a Serotype 4b Strain from a Cheese-Related Outbreak in Portugal

2018 ◽  
Vol 6 (25) ◽  
Author(s):  
Vânia Ferreira ◽  
Rui Magalhães ◽  
Gonçalo Almeida ◽  
Didier Cabanes ◽  
Moritz Fritzenwanker ◽  
...  
Keyword(s):  
Listeria Monocytogenes ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Clinical Strain ◽  
Content Type ◽  
Serotype 4B ◽  
Placental Sample

ABSTRACT We report here the draft genome sequence of Listeria monocytogenes 2542, a serotype 4b clinical strain recovered from a placental sample during a cheese-related listeriosis outbreak in Portugal.

scholarly journals Draft Genome Sequence of Streptococcus canis Clinical Strain OT1, Isolated from a Dog Owner with Invasive Infection without a Dog Bite in Japan

2019 ◽  
Vol 8 (39) ◽  
Author(s):  
Haruno Yoshida ◽  
Yukie Katayama ◽  
Yasuto Fukushima ◽  
Hirofumi Ohtaki ◽  
Kiyofumi Ohkusu ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Clinical Strain ◽  
Invasive Infection ◽  
Dog Bite ◽  
Content Type ◽  
Invasive Infections ◽  
Streptococcus Canis

Streptococcus canis is a β-hemolytic bacterium that can cause invasive infections in animals and humans. Here, we report a draft genome sequence of S. canis strain OT1, isolated from a female dog owner with bacteremia without a dog bite. The draft genome comprises 2,030,366 bp in 48 contigs.

scholarly journals Draft Genome Sequence of Staphylococcus epidermidis Clinical Strain GOI1153754-03-14 Isolated from an Infected Knee Prosthesis

2017 ◽  
Vol 5 (20) ◽  
Author(s):  
Marta Bottagisio ◽  
Alessio Soggiu ◽  
Arianna B. Lovati ◽  
Marco Toscano ◽  
Cristian Piras ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Staphylococcus Epidermidis ◽  
Genomic Sequence ◽  
Knee Prosthesis ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Clinical Strain ◽  
Content Type ◽  
Metallic Implants ◽  
Orthopedic Prosthesis

ABSTRACT We announce the draft genome sequence of Staphylococcus epidermidis clinical strain GOI1153754-03-14, isolated from an infected orthopedic prosthesis. The reported genomic sequence will provide valuable information concerning the mechanisms of the biofilm formation on metallic implants.

scholarly journals First Draft Genome Sequence of a Clinical Strain of Nocardia cerradoensis

2017 ◽  
Vol 5 (39) ◽  
Author(s):  
Gema Carrasco ◽  
Sara Monzón ◽  
Pilar Jiménez ◽  
Isabel Cuesta ◽  
Joaquín Bartolomé-Alvarez ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Polyketide Synthase ◽  
Draft Genome ◽  
Gene Clusters ◽  
Immunocompetent Patient ◽  
Draft Genome Sequence ◽  
Clinical Strain ◽  
Intrinsic Resistance ◽  
Biosynthetic Gene Clusters ◽  
Content Type

ABSTRACT This paper reports the first draft genome sequence for a strain of Nocardia cerradoensis obtained from an immunocompetent patient with a knee infection. The 8.2-Mb genome has 8,329 coding sequences, including intrinsic resistance genes, biosynthetic gene clusters for polyketide synthase and nonribosomal peptide synthase, virulence genes, and prophages.

scholarly journals Draft Genome Sequence of Listeria monocytogenes Serovar 1/2a Strain IZSAM_Lm_14-16064, Isolated from an Italian Cooked Ham in 2014

2020 ◽  
Vol 9 (27) ◽  
Author(s):  
Valeria Di Lollo ◽  
Massimiliano Orsini ◽  
Vicdalia Acciari ◽  
Cesare Cammà ◽  
Patrizia Centorame ◽  
...  
Keyword(s):  
Listeria Monocytogenes ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Clinical Strain ◽  
Content Type ◽  
Cooked Ham

ABSTRACT In this report, the draft genome sequence of Listeria monocytogenes serovar 1/2a strain IZSAM_Lm_14-16064, isolated in Italy from a cooked ham, is announced. The genome is similar to that of a clinical strain isolated in 2014.

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