scholarly journals Complete Mitochondrial Genome Sequences of Nine Aspergillus flavus Strains

2021 ◽  
Vol 10 (45) ◽  
Author(s):  
Miya Hugaboom ◽  
Max L. Beck ◽  
Katherine H. Carrubba ◽  
D. Vignesh Chennupati ◽  
Aryan Gupta ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Mitochondrial Genome ◽  
Aspergillus Flavus ◽  
Complete Mitochondrial Genome ◽  
Nuclear Genome ◽  
Fungal Species ◽  
Genome Sequences ◽  
Content Type

Nuclear genome sequences incompletely characterize the genomic content and thus the genetic diversity of fungal species. Here, we present the complete mitochondrial genome sequences of nine Aspergillus flavus strains, providing useful information for inter- and intraspecific analyses.

scholarly journals Partial Mitochondrial Genome Sequences of Two Abyssal Sponges (Porifera: Hexactinellida), Bathydorus laniger and Docosaccus maculatus

2018 ◽  
Vol 6 (16) ◽  
pp. e00234-18
Author(s):  
Amanda S. Kahn ◽  
Jonathan B. Geller
Keyword(s):  
Mitochondrial Genome ◽  
Complete Mitochondrial Genome ◽  
Repetitive Elements ◽  
Genome Sequences ◽  
Structural Element ◽  
Content Type ◽  
Hexactinellid Sponges

ABSTRACT We announce the nearly complete mitochondrial genome sequences of two hexactinellid sponges, Bathydorus laniger and Docosaccus maculatus. A contiguous region of over 15,000 bp was sequenced from each genome. An uncommon structural element was identified as a series of repetitive elements with sequences matching cob in the genome of D. maculatus.

scholarly journals Complete mitochondrial genome sequences of the northern spotted owl (Strix occidentalis caurina) and the barred owl (Strix varia; Aves: Strigiformes: Strigidae) confirm the presence of a duplicated control region

2017 ◽  
Author(s):  
Zachary R Hanna ◽  
James B Henderson ◽  
Anna B Sellas ◽  
Jérôme Fuchs ◽  
Rauri C. K. Bowie ◽  
...  
Keyword(s):  
Mitochondrial Genome ◽  
Control Region ◽  
Sequence Data ◽  
Complete Mitochondrial Genome ◽  
Nuclear Genome ◽  
Genome Sequences ◽  
Spotted Owl ◽  
Strix Occidentalis ◽  
Northern Spotted Owl ◽  
Strix Occidentalis Caurina

We report here the successful assembly of the complete mitochondrial genomes of the northern spotted owl (Strix occidentalis caurina) and the barred owl (S. varia). We utilized sequence data from two sequencing methodologies, Illumina paired-end sequence data with insert lengths ranging from approximately 250 nucleotides (nt) to 9,600 nt and read lengths from 100-375 nt and Sanger sequences. We employed multiple assemblers and alignment methods to generate the final assemblies. The circular genomes of S. o. caurina and S. varia are comprised of 19,948 nt and 18,975 nt, respectively. Both code for two rRNAs, twenty-two tRNAs, and thirteen polypeptides. They both have duplicated control region sequences with complex repeat structures. These are the first complete mitochondrial genome sequences of owls (Aves: Strigiformes) possessing duplicated control regions. We searched the nuclear genome of S. o. caurina for copies of mitochondrial genes and found at least nine separate stretches of nuclear copies of gene sequences originating in the mitochondrial genome (Numts).

scholarly journals Complete mitochondrial genome sequences of the northern spotted owl (Strix occidentalis caurina) and the barred owl (Strix varia; Aves: Strigiformes: Strigidae) confirm the presence of a duplicated control region

2017 ◽  
Author(s):  
Zachary R Hanna ◽  
James B Henderson ◽  
Anna B Sellas ◽  
Jérôme Fuchs ◽  
Rauri C. K. Bowie ◽  
...  
Keyword(s):  
Mitochondrial Genome ◽  
Control Region ◽  
Sequence Data ◽  
Complete Mitochondrial Genome ◽  
Nuclear Genome ◽  
Genome Sequences ◽  
Spotted Owl ◽  
Strix Occidentalis ◽  
Northern Spotted Owl ◽  
Strix Occidentalis Caurina

We report here the successful assembly of the complete mitochondrial genomes of the northern spotted owl (Strix occidentalis caurina) and the barred owl (S. varia). We utilized sequence data from two sequencing methodologies, Illumina paired-end sequence data with insert lengths ranging from approximately 250 nucleotides (nt) to 9,600 nt and read lengths from 100-375 nt and Sanger sequences. We employed multiple assemblers and alignment methods to generate the final assemblies. The circular genomes of S. o. caurina and S. varia are comprised of 19,948 nt and 18,975 nt, respectively. Both code for two rRNAs, twenty-two tRNAs, and thirteen polypeptides. They both have duplicated control region sequences with complex repeat structures. These are the first complete mitochondrial genome sequences of owls (Aves: Strigiformes) possessing duplicated control regions. We searched the nuclear genome of S. o. caurina for copies of mitochondrial genes and found at least nine separate stretches of nuclear copies of gene sequences originating in the mitochondrial genome (Numts).

scholarly journals Sixteen Draft Genome Sequences Representing the Genetic Diversity of Aspergillus flavus and Aspergillus parasiticus Colonizing Peanut Seeds in Ethiopia

2020 ◽  
Vol 9 (30) ◽  
Author(s):  
Renee S. Arias ◽  
Abdi Mohammed ◽  
Valerie A. Orner ◽  
Paola C. Faustinelli ◽  
Marshall C. Lamb ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Rna Interference ◽  
Aspergillus Flavus ◽  
Aspergillus Parasiticus ◽  
Draft Genome ◽  
Genome Sequences ◽  
Content Type ◽  
Aflatoxin Accumulation

ABSTRACT Draft genomes of 16 isolates of Aspergillus flavus Link and Aspergillus parasiticus Speare, identified as the predominant genotypes colonizing peanuts in four farming regions in Ethiopia, are reported. These data will allow mining for sequences that could be targeted by RNA interference to prevent aflatoxin accumulation in peanut seeds.

scholarly journals A phylogenetic study of Haemocystidium parasites and other Haemosporida using complete mitochondrial genome sequences

2020 ◽  
Vol 85 ◽  
pp. 104576
Author(s):  
M. Andreína Pacheco ◽  
Luis M.P. Ceríaco ◽  
Nubia E. Matta ◽  
Mario Vargas-Ramírez ◽  
Aaron M. Bauer ◽  
...  
Keyword(s):  
Mitochondrial Genome ◽  
Complete Mitochondrial Genome ◽  
Phylogenetic Study ◽  
Genome Sequences
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