scholarly journals Draft Genome Sequence of KCTC 12630, the Type Strain of the Novel Species Sphingomonas ginsengisoli

2019 ◽  
Vol 8 (2) ◽  
Author(s):  
Yan-Qiong Li ◽  
Hui Zhang ◽  
Manik Prabhu Narsing Rao ◽  
Zhou-Yan Dong ◽  
Dalal Hussien M. Alkhalifah ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Type Strain ◽  
Novel Species ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
The Novel ◽  
Content Type

We report here the draft genome sequence of Sphingomonas ginsengisoli KCTC 12630T. The draft genome has a size of 3,045,889 bp and a G+C content of 67.1%.

scholarly journals Draft Genome Sequence of MPKL 26, the Type Strain of the Novel Species Sinomonas mesophila

2017 ◽  
Vol 5 (17) ◽  
Author(s):  
Manik Prabhu Narsing Rao ◽  
Jian-Yu Jiao ◽  
Lan Liu ◽  
Bao-Zhu Fang ◽  
Xiao-Tong Zhang ◽  
...  
Keyword(s):  
Silver Nanoparticles ◽  
Genome Sequence ◽  
Type Strain ◽  
Novel Species ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
The Novel ◽  
Content Type

ABSTRACT Sinomonas mesophila MPKL 26T can produce silver nanoparticles. Here, we present the 4.0-Mb genome of this type strain, which contains 47 scaffolds with an N 50 scaffold length of 261,266 bp. The availability of the genome sequence will provide a better understanding of strain MPKL 26T and the genus Sinomonas.

scholarly journals Draft Genome Sequence of JVAP01T, the Type Strain of the Novel Species Acinetobacter dijkshoorniae

2017 ◽  
Vol 5 (2) ◽  
Author(s):  
Dietmar Fernández-Orth ◽  
Clara Cosgaya ◽  
Murat Telli ◽  
Noraida Mosqueda ◽  
Marta Marí-Almirall ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Type Strain ◽  
Novel Species ◽  
Draft Genome ◽  
Acinetobacter Calcoaceticus ◽  
Draft Genome Sequence ◽  
The Novel ◽  
Human Pathogen ◽  
Content Type ◽  
Carbapenemase Gene

ABSTRACT Here, we report the draft genome sequence of the type strain of Acinetobacter dijkshoorniae, a novel human pathogen within the Acinetobacter calcoaceticus–Acinetobacter baumannii (ACB) complex. Strain JVAP01T has an estimated genome size of 3.9 Mb, exhibits a 38.8% G+C content, and carries a plasmid with the bla NDM-1 carbapenemase gene.

scholarly journals Draft Genome Sequence of Aeromonas cavernicola sp. nov. DSM 24474T, Isolated from a Cavern Brook in the Moravia Region of the Czech Republic

2018 ◽  
Vol 6 (15) ◽  
pp. e00227-18
Author(s):  
S. M. Colston ◽  
A. Navarro ◽  
A. J. Martinez-Murcia ◽  
J. Graf
Keyword(s):  
Czech Republic ◽  
Genome Sequence ◽  
Novel Species ◽  
Draft Genome ◽  
Water Sources ◽  
Draft Genome Sequence ◽  
The Czech Republic ◽  
Content Type

ABSTRACT Species of the Aeromonas genus can be found in numerous environmental milieus, including various water sources, and some species cause disease in animals. We present here the draft genome sequence for Aeromonas cavernicola DSM 24474T, a novel species isolated from a freshwater brook within a cavern in the Czech Republic.

scholarly journals Draft Genome Sequence of the Moderately Thermophilic Actinobacterial Steroid-Transforming Saccharopolyspora hirsuta subsp. hirsuta Strain VKM Ac-666T

2020 ◽  
Vol 9 (1) ◽  
Author(s):  
Tatyana G. Lobastova ◽  
Victoria V. Fokina ◽  
Eugeny Y. Bragin ◽  
Victoriya Y. Shtratnikova ◽  
Irina P. Starodumova ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Sugarcane Bagasse ◽  
Type Strain ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Moderately Thermophilic ◽  
Saccharopolyspora Hirsuta

The draft genome sequence of the type strain Saccharopolyspora hirsuta subsp. hirsuta VKM Ac-666 was sequenced. This moderately thermophilic actinobacterial strain of sugarcane bagasse origin is able to transform different steroid substrates.

scholarly journals Improved De Novo Draft Genome Sequence of the Nocavionin-Producing Type Strain Nocardia terpenica IFM 0706 and Comparative Genomics with the Closely Related Strain Nocardia terpenica IFM 0406

2020 ◽  
Vol 9 (34) ◽  
Author(s):  
Anina Buchmann ◽  
Harald Gross
Keyword(s):  
Comparative Genomics ◽  
Genome Size ◽  
Genome Sequence ◽  
Type Strain ◽  
De Novo ◽  
Draft Genome ◽  
Pathogenic Strain ◽  
Draft Genome Sequence ◽  
Related Strain ◽  
Content Type

ABSTRACT We report an improved de novo draft genome sequence of the human-pathogenic strain Nocardia terpenica IFM 0706T. The resequencing unveiled that the genome size is larger than anticipated, reducing significantly the number of contigs and building a basis for comparison with the closely related strain N. terpenica IFM 0406.

scholarly journals First Insights into the Genome Sequence of Clostridium oryzae DSM 28571, Isolated from the Soil of a Japanese Rice Field

2017 ◽  
Vol 5 (24) ◽  
Author(s):  
Anja Poehlein ◽  
Anna Lena Gippert ◽  
Maaike J. Bierenbroodspot ◽  
Rolf Daniel
Keyword(s):  
Rice Straw ◽  
Genome Sequence ◽  
Rice Field ◽  
Novel Species ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes

ABSTRACT Clostridium oryzae was originally isolated from the soil of a Japanese rice field. C. oryzae represents a novel species within the genus Clostridium and is associated with anaerobic rice straw degradation. Here, we present the draft genome sequence of C. oryzae DSM 28571 (5.076 Mbp), containing 4,590 predicted protein-coding genes.

scholarly journals Draft Genome Sequence of Clostridium estertheticum subsp. laramiense DSM 14864T, Isolated from Spoiled Uncooked Beef

2019 ◽  
Vol 8 (47) ◽  
Author(s):  
Nikola Palevich ◽  
Faith P. Palevich ◽  
Paul H. Maclean ◽  
Ruy Jauregui ◽  
Eric Altermann ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Type Strain ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type

Clostridium estertheticum subsp. laramiense type strain DSM 14864 (ATCC 51254) was isolated from vacuum-packaged refrigerated spoiled beef. This report describes the generation and annotation of the 5.0-Mb draft genome sequence of C. estertheticum subsp. laramiense DSM 14864T.

scholarly journals Draft Genome Sequence of NRRL 5109, an Ex-Type Isolate of Aspergillus neoellipticus

2018 ◽  
Vol 7 (22) ◽  
Author(s):  
Licui Li ◽  
Tom Hsiang ◽  
Qili Li ◽  
Long Wang ◽  
Zhihe Yu
Keyword(s):  
Genome Sequence ◽  
Type Strain ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Content Type ◽  
Type Isolate ◽  
Final Assembly

We report here a draft genome sequence of an ex-type strain of Aspergillus neoellipticus, NRRL 5109, which was isolated from pus of a case of chronic emphysema. The final assembly consists of 160 scaffolds totaling 27.55 Mbp (G+C content, 49.96%) and 8,858 predicted genes.

scholarly journals Draft Genome Sequence of Vibrio splendidus DSM 19640

2017 ◽  
Vol 5 (48) ◽  
Author(s):  
Cynthia Maria Chibani ◽  
Anja Poehlein ◽  
Olivia Roth ◽  
Heiko Liesegang ◽  
Carolin Charlotte Wendling
Keyword(s):  
Genome Sequence ◽  
Type Strain ◽  
Draft Genome ◽  
Abundant Species ◽  
Draft Genome Sequence ◽  
Vibrio Splendidus ◽  
Protein Coding ◽  
Coding Sequences ◽  
Content Type

ABSTRACT Here, we present the draft genome sequence of Vibrio splendidus type strain DSM 19640. V. splendidus is an abundant species among coastal vibrioplankton. The assembly resulted in a 5,729,362-bp draft genome with 5,032 protein-coding sequences, 6 rRNAs, and 117 tRNAs.

scholarly journals Draft Genome Sequence of Duganella sp. Strain DN04, Isolated from Cultivated Soil

2019 ◽  
Vol 8 (32) ◽  
Author(s):  
Rachel Raths ◽  
Vincent Peta ◽  
Heike Bücking
Keyword(s):  
North Carolina ◽  
Genome Size ◽  
Genome Sequence ◽  
Novel Species ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Coding Sequences ◽  
Content Type ◽  
Maize Field

Here, we sequenced Duganella sp. strain DN04, a novel species within the genus Duganella that was isolated from a maize field in North Carolina. The assembled draft genome size is 6,562,230 bp, with a total of 6,039 protein coding sequences and 3,889 functionally assigned genes, including genes putatively involved in the colonization of plants.

Sign in / Sign up

Export Citation Format

Share Document