scholarly journals Complete Genome Sequence of Bacteriophage Fizzles, Isolated from Microbacterium foliorum

2022 ◽  
Author(s):  
Skyler Adams ◽  
Gabrielle Spotz ◽  
Riley Babcock ◽  
Chloe Butler ◽  
Samantha Conger ◽  
...  
Keyword(s):  
Soil Sample ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Nucleotide Identity ◽  
Protein Coding ◽  
Protein Coding Genes ◽  
Double Stranded Dna

Microbacteriophage Fizzles has a 62,078-bp linear double-stranded DNA genome sequence, predicted to contain 104 protein-coding genes. Fizzles is a Siphoviridae actinobacteriophage isolated from an ant hill soil sample collected in Stephenville, TX. Microbacteriophage Fizzles has >83.6% nucleotide identity with microbacteriophages Squash and Nike.

scholarly journals Complete Genome Sequence of Bacteriophage Finny, Isolated from a Microbacterium foliorum Culture

2019 ◽  
Vol 8 (40) ◽  
Author(s):  
Tiffany Lee ◽  
Michaela Aguirre ◽  
Shey Andrews ◽  
Kayla Bahr ◽  
Abigail Ballard ◽  
...  
Keyword(s):  
Soil Sample ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
Double Stranded Dna

Actinobacteriophage Finny contains a circularly permuted 40,313-bp double-stranded DNA genome with 63 predicted protein-coding genes. Finny was directly isolated from a soil sample collected in New Braunfels, Texas, that was incubated with Microbacterium foliorum SEA B-24224. Finny is closely related to bacteriophages MCubed, Andromedas, ColaCorta, Eleri, and Sansa.

scholarly journals Complete Genome Sequence of Cluster A1 Mycobacterium smegmatis Bacteriophage Arlo

2018 ◽  
Vol 7 (16) ◽  
Author(s):  
Brittany Stewart ◽  
Megan Adams ◽  
Miranda Fuentes ◽  
Leeila Hanson ◽  
Esperanza Sandoval ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Base Pair ◽  
Complete Genome Sequence ◽  
Mycobacterium Smegmatis ◽  
Complete Genome ◽  
Soil Samples ◽  
Protein Coding ◽  
Protein Coding Genes ◽  
Double Stranded Dna

Mycobacteriophage Arlo is a newly isolated Siphoviridae bacteriophage isolated from soil samples collected in Bluff Dale, Texas. Mycobacteriophage Arlo has a 52,960 base-pair double-stranded DNA genome that is predicted to contain 96 protein-coding genes.

scholarly journals Complete Genome Sequence of the Soil-Isolated Psychrobacillus sp. Strain AK 1817, Capable of Biotransforming the Ergostane Triterpenoid Antcin K

2021 ◽  
Vol 10 (40) ◽  
Author(s):  
Luis B. Gómez-Luciano ◽  
Yu-Wei Wu ◽  
Chien-Min Chiang ◽  
Te-Sheng Chang ◽  
Jiumn-Yih Wu ◽  
...  
Keyword(s):  
Soil Sample ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Noncoding Rnas ◽  
Tropical Soil ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
Pacbio Rs Ii

The soil bacterium Psychrobacillus sp. strain AK 1817 was isolated from a tropical soil sample collected in Taiwan. Strain AK 1817 biotransforms the ergostane triterpenoid antcin K from the fungus Antrodia cinnamomea . The genome was sequenced using the PacBio RS II platform and consists of one chromosome of 4,096,020 bp, comprising 3,907 protein-coding genes, 75 tRNAs, 30 rRNAs, 5 noncoding RNAs (ncRNAs), and 100 pseudogenes.

scholarly journals Complete Genome Sequence of Cluster O Mycobacterium smegmatis Bacteriophage Ryadel

2019 ◽  
Vol 8 (13) ◽  
Author(s):  
Travis Miller ◽  
Danielle Bachhofer ◽  
Ashleigh Cooper ◽  
Jessica Doty ◽  
Josh Katuri ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Base Pair ◽  
Complete Genome Sequence ◽  
Mycobacterium Smegmatis ◽  
Complete Genome ◽  
Protein Coding ◽  
Protein Coding Genes ◽  
Double Stranded Dna ◽  
Dyad Symmetry

Mycobacteriophage Ryadel is a newly isolated cluster O Siphoviridae bacteriophage, characterized by an unusual prolate capsid, containing a 72,658-base-pair double-stranded DNA genome with 132 predicted protein-coding genes. Conserved among cluster O bacteriophages, the Ryadel genome contains 31 copies of a unique 17-bp sequence with dyad symmetry.

scholarly journals Complete Genome Sequence of Bacteriophage IndyLu, Isolated from a Microbacterium foliorum Culture

2021 ◽  
Vol 10 (50) ◽  
Author(s):  
Ashley Suris ◽  
Selina Alvarado ◽  
Tommy Butler ◽  
Carlos Canales ◽  
Matthew Castro ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Soil Samples ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
Double Stranded Dna

Microbacteriophage IndyLu was isolated from Microbacterium foliorum NRRL B-24224. The 41,958-bp double-stranded DNA genome has 71 predicted protein coding genes and 1 tRNA. The lytic actinobacteriophage was extracted from soil samples collected in Stephenville, TX, and is related to cluster EB bacteriophages Didgeridoo and Lahqtemish.

scholarly journals Complete Genome Sequence of Cupriavidus necator H16 (DSM 428)

2019 ◽  
Vol 8 (37) ◽  
Author(s):  
Gareth T. Little ◽  
Muhammad Ehsaan ◽  
Christian Arenas-López ◽  
Kamran Jawed ◽  
Klaus Winzer ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Cupriavidus Necator ◽  
Rrna Genes ◽  
Trna Genes ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
Cupriavidus Necator H16

The hydrogen-utilizing strain Cupriavidus necator H16 (DSM 428) was sequenced using a combination of PacBio and Illumina sequencing. Annotation of this strain reveals 6,543 protein-coding genes, 263 pseudogenes, 64 tRNA genes, and 15 rRNA genes.

scholarly journals Complete Genome Sequence of Elizabethkingia miricola Strain EM798-26 Isolated from the Blood of a Cancer Patient

2018 ◽  
Vol 6 (1) ◽  
Author(s):  
Jiun-Nong Lin ◽  
Chung-Hsu Lai ◽  
Chih-Hui Yang ◽  
Yi-Han Huang ◽  
Hsi-Hsun Lin
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Cell Lymphoma ◽  
B Cell Lymphoma ◽  
Protein Coding ◽  
Protein Coding Genes ◽  
Large B Cell Lymphoma ◽  
Candidate Protein ◽  
Large B Cell

ABSTRACT Elizabethkingia miricola EM798-26 was isolated from the blood of a patient with diffuse large B-cell lymphoma in Taiwan. We report here the complete genome sequence of EM798-26, which contains a G+C content of 35.7% and 3,877 candidate protein-coding genes.

scholarly journals Complete Genome Sequence of Stenotrophomonas maltophilia Myophage Moby

2020 ◽  
Vol 9 (1) ◽  
Author(s):  
Alison Vicary ◽  
Heather Newkirk ◽  
Russell Moreland ◽  
Carlos F. Gonzalez ◽  
Mei Liu ◽  
...  
Keyword(s):  
Multidrug Resistance ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Stenotrophomonas Maltophilia ◽  
Nosocomial Pathogen ◽  
Protein Coding ◽  
Content Type ◽  
Protein Coding Genes ◽  
Phage T4

Stenotrophomonas maltophilia is a prevalent nosocomial pathogen with multidrug resistance. Here, we describe the complete genome of S. maltophilia myophage Moby, which shares characteristics with Enterobacteria phage T4 and is closely related to Stenotrophomonas phage IME-SM1. Moby has a 159,365-bp genome with 271 predicted protein-coding genes and 24 predicted tRNAs.

scholarly journals Complete Genome Sequence of Acinetobacter indicus Type Strain SGAir0564 Isolated from Tropical Air Collected in Singapore

2018 ◽  
Vol 6 (18) ◽  
pp. e00230-18 ◽  
Author(s):  
Vineeth Kodengil Vettath ◽  
Ana Carolina M. Junqueira ◽  
Akira Uchida ◽  
Rikky W. Purbojati ◽  
James N. I. Houghton ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Type Strain ◽  
Protein Coding ◽  
Content Type ◽  
Air Samples ◽  
Protein Coding Genes ◽  
Long Reads

ABSTRACT Acinetobacter indicus (Gammaproteobacteria) is a strict aerobic nonmotile bacterium. The strain SGAir0564 was isolated from air samples collected in Singapore. The complete genome is 3.1 Mb and was assembled using a combination of short and long reads. The genome contains 2,808 protein-coding genes, 80 tRNAs, and 21 rRNA subunits.

scholarly journals Complete Genome Sequence of Brachyspira hyodysenteriae Type Strain B-78 (ATCC 27164)

2016 ◽  
Vol 4 (4) ◽  
Author(s):  
Nandita S. Mirajkar ◽  
Timothy J. Johnson ◽  
Connie J. Gebhart
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Type Strain ◽  
Etiological Agent ◽  
Swine Dysentery ◽  
Protein Coding ◽  
Brachyspira Hyodysenteriae ◽  
Protein Coding Genes ◽  
Rna Genes

Reported herein is the complete genome sequence of the type strain B-78 (ATCC 27164) of Brachyspira hyodysenteriae , the etiological agent of swine dysentery. The 3.1-Mb genome consists of a 3.056-Mb chromosome and a 45-kb plasmid, with 2,617 protein-coding genes, 39 RNA genes, and 40 pseudogenes.

Sign in / Sign up

Export Citation Format

Share Document