scholarly journals Pathotyping of Newcastle Disease Virus: a Novel Single BsaHI Digestion Method of Detection and Differentiation of Avirulent Strains (Lentogenic and Mesogenic Vaccine Strains) from Virulent Virus

Author(s):  
Perumal Arumugam Desingu ◽  
Shambhu Dayal Singh ◽  
Kuldeep Dhama ◽  
Obli Rajendran Vinodhkumar ◽  
K. Nagarajan ◽  
...  

The extensive use of the NDV vaccine strain and the existence of avirulent NDV strains in wild birds makes it difficult to diagnose Newcastle Disease virus (NDV). The intracerebral pathogenicity index (ICPI) and/or sequencing-based identification, which are required to determine virulent NDV, are time-consuming, costly, difficult, and cruel techniques.

2021 ◽  
Author(s):  
Perumal Arumugam Desingu ◽  
Shambhu Dayal Singh ◽  
Kuldeep Dhama ◽  
Obli Rajendran Vinodhkumar ◽  
K Nagarajan ◽  
...  

We provide a novel single restriction enzyme (RE) (BsaHI) digestion approach for detecting distinct pathotypes of the Newcastle disease virus (NDV). After scanning 4000 F gene nucleotide sequences in the NCBI database, a single RE (BsaHI) digesting site was discovered in the cleavage site. APMV-I "F gene" Class II specific primer-based reverse transcriptase PCR (RT-PCR) was utilized to amplify a 535 bp fragment, which was then digested with a single RE (BsaHI) for pathotyping avian NDV field isolates and pigeon paramyxovirus-1 isolates. The avirulent (lentogenic and mesogenic strains) produce 189 and 346 bp fragments, respectively, but the result in velogenic strains remains undigested with 535 bp fragments. In addition, 45 field NDV isolates and 8 vaccine strains were used to confirm the approach. The sequence-based analysis also agrees with the data obtained utilizing the single RE (BsaHI) digestion approach. The proposed technique had the potential to distinguish between avirulent and virulent strains in a short space of time, making it valuable in NDV surveillance and monitoring research.


2015 ◽  
Vol 82 (5) ◽  
pp. 1530-1536 ◽  
Author(s):  
Pingze Zhang ◽  
Guangyao Xie ◽  
Xinxin Liu ◽  
Lili Ai ◽  
Yanyu Chen ◽  
...  

ABSTRACTNewcastle disease (ND), caused by the virulent Newcastle disease virus (NDV), is one of the most important viral diseases of birds globally, but little is currently known regarding enzootic trends of NDV in northeastern China, especially for class I viruses. Thus, we performed a surveillance study for NDV in northeastern China from 2013 to 2015. A total 755 samples from wild and domestic birds in wetlands and live bird markets (LBMs) were collected, and 10 isolates of NDV were identified. Genetic and phylogenetic analyses showed that five isolates from LBMs belong to class I subgenotype 1b, two (one from wild birds and one from LBMs) belong to the vaccine-like class II genotype II, and three (all from wild birds) belong to class II subgenotype Ib. Interestingly, the five class I isolates had epidemiological connections with viruses from southern, eastern, and southeastern China. Our findings, together with recent prevalence trends of class I and virulent class II NDV in China, suggest possible virus transmission between wild and domestic birds and the potential for an NDV epidemic in the future.


2016 ◽  
Vol 54 (5) ◽  
pp. 1228-1235 ◽  
Author(s):  
Kiril M. Dimitrov ◽  
Dong-Hun Lee ◽  
Dawn Williams-Coplin ◽  
Timothy L. Olivier ◽  
Patti J. Miller ◽  
...  

Virulent strains of Newcastle disease virus (NDV) cause Newcastle disease (ND), a devastating disease of poultry and wild birds. Phylogenetic analyses clearly distinguish historical isolates (obtained prior to 1960) from currently circulating viruses of class II genotypes V, VI, VII, and XII through XVIII. Here, partial and complete genomic sequences of recent virulent isolates of genotypes II and IX from China, Egypt, and India were found to be nearly identical to those of historical viruses isolated in the 1940s. Phylogenetic analysis, nucleotide distances, and rates of change demonstrate that these recent isolates have not evolved significantly from the most closely related ancestors from the 1940s. The low rates of change for these virulent viruses (7.05 × 10−5and 2.05 × 10−5per year, respectively) and the minimal genetic distances existing between these and historical viruses (0.3 to 1.2%) of the same genotypes indicate an unnatural origin. As with any other RNA virus, Newcastle disease virus is expected to evolve naturally; thus, these findings suggest that some recent field isolates should be excluded from evolutionary studies. Furthermore, phylogenetic analyses show that these recent virulent isolates are more closely related to virulent strains isolated during the 1940s, which have been and continue to be used in laboratory and experimental challenge studies. Since the preservation of viable viruses in the environment for over 6 decades is highly unlikely, it is possible that the source of some of the recent virulent viruses isolated from poultry and wild birds might be laboratory viruses.


2018 ◽  
Vol 14 (1) ◽  
Author(s):  
Hany F. Ellakany ◽  
Ahmed R. Gado ◽  
Ahmed R. Elbestawy ◽  
Hatem S. Abd El-Hamid ◽  
Hafez M. Hafez ◽  
...  

2012 ◽  
Vol 103 (1) ◽  
pp. 49-62 ◽  
Author(s):  
M.A. Hoque ◽  
G.W. Burgess ◽  
D. Karo-Karo ◽  
A.L. Cheam ◽  
L.F. Skerratt

1996 ◽  
Vol 25 (4) ◽  
pp. 837-844 ◽  
Author(s):  
Khatijah Yusoff ◽  
Wen Siang Tan ◽  
Chin Hoon Lau ◽  
Ban Kim Ng ◽  
Abdul Latif Ibrahim

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