Stationary disk assemblies in a ternary system with long range interaction

2019 ◽  
Vol 21 (06) ◽  
pp. 1850046 ◽  
Author(s):  
Xiaofeng Ren ◽  
Chong Wang

The free energy of a ternary system, such as a triblock copolymer, is a sum of two parts: an interface energy determined by the size of the interfaces separating the micro-domains of the three constituents, and a long range interaction energy that serves to prevent unlimited micro-domain growth. In two dimensions a parameter range is identified where the system admits stable stationary disk assemblies. Such an assembly consists of perturbed disks made from either type-I constituent or type-II constituent. All the type-I disks have approximately the same radius and all the type-II disks also have approximately the same radius. The locations of the disks are determined by minimization of a function. Depending on the parameters, the disks of the two types can be mixed in an organized way, or mixed in a random way. They can also be fully separated. The first scenario offers a mathematical proof of the existence of a morphological phase for triblock copolymers conjectured by polymer scientists. The last scenario shows that the ternary system is capable of producing two levels of structure. The primary structure is at the microscopic level where disks form near-perfect lattices. The secondary structure is at the macroscopic level forming two large regions, one filled with type-I disks and the other filled with type-II disks. A macroscopic, circular interface separates the two regions.

2002 ◽  
Vol 718 ◽  
Author(s):  
Jian Yu ◽  
X. J. Meng ◽  
J.L. Sun ◽  
G.S. Wang ◽  
J.H. Chu

AbstractIn this paper, size-induced ferroelectricit yweakening, phase transformation, and anomalous lattice expansion are observed in nanocrystalline BaTiO3 (nc-BaTiO3) deriv ed b y low temperature hydrothermal methods, and they are w ellunderstood using the terms of the long-range interaction and its cooperative phenomena altered by particle size in covalen t ionic nanocrystals. In cubic nc-BaTiO3, five modes centerd at 186, 254, 308, 512 and 716 cm-1 are observed Raman active in cubic nanophase, and they are attributed to local rhombohedral distortion breaking inversion-symmetry in cubic nanophase. The254 and 308 cm-1 modes are significantly affected not only by the concentration of hydroxyl defects, but also their particular configuration. And the 806 cm-1 modes found to be closely associated with OH - absorbed on grain boundaries.


Mathematics ◽  
2021 ◽  
Vol 9 (14) ◽  
pp. 1624
Author(s):  
Leonid Litinskii ◽  
Boris Kryzhanovsky

In the present paper, we examine Ising systems on d-dimensional hypercube lattices and solve an inverse problem where we have to determine interaction constants of an Ising connection matrix when we know a spectrum of its eigenvalues. In addition, we define restrictions allowing a random number sequence to be a connection matrix spectrum. We use the previously obtained analytical expressions for the eigenvalues of Ising connection matrices accounting for an arbitrary long-range interaction and supposing periodic boundary conditions.


2021 ◽  
Vol 4 (3) ◽  
pp. 49
Author(s):  
Tomas Zelenka ◽  
Charalampos Spilianakis

The functional implications of the three-dimensional genome organization are becoming increasingly recognized. The Hi-C and HiChIP research approaches belong among the most popular choices for probing long-range chromatin interactions. A few methodical protocols have been published so far, yet their reproducibility and efficiency may vary. Most importantly, the high frequency of the dangling ends may dramatically affect the number of usable reads mapped to valid interaction pairs. Additionally, more obstacles arise from the chromatin compactness of certain investigated cell types, such as primary T cells, which due to their small and compact nuclei, impede limitations for their use in various genomic approaches. Here we systematically optimized all the major steps of the HiChIP protocol in T cells. As a result, we reduced the number of dangling ends to nearly zero and increased the proportion of long-range interaction pairs. Moreover, using three different mouse genotypes and multiple biological replicates, we demonstrated the high reproducibility of the optimized protocol. Although our primary goal was to optimize HiChIP, we also successfully applied the optimized steps to Hi-C, given their significant protocol overlap. Overall, we describe the rationale behind every optimization step, followed by a detailed protocol for both HiChIP and Hi-C experiments.


2020 ◽  
Vol 102 (1) ◽  
Author(s):  
Vincent Mancois ◽  
Julien Barré ◽  
Chang Chi Kwong ◽  
Alain Olivetti ◽  
Pascal Viot ◽  
...  

Sign in / Sign up

Export Citation Format

Share Document