The Electrochemical Approach towards Proton Coupled Electron Transfer Reaction Pathways for Oxidation of Thymine in Water

2015 ◽  
Vol 19 (01-03) ◽  
pp. 492-499 ◽  
Author(s):  
Scott D. Hicks ◽  
Silei Xiong ◽  
Curt J. Bougher ◽  
Grigori A. Medvedev ◽  
James Caruthers ◽  
...  

A water-soluble manganese porphyrin complex was examined for the catalytic formation of chlorine dioxide from chlorite under ambient temperature at pH 5.00 and 6.90. Quantitative kinetic modeling allowed for the deduction of a mechanism that accounts for all experimental observations. Catalysis is initiated via an OAT (Oxygen Atom Transfer) reaction resulting in formation of a putative manganese(V) oxo species, which undergoes ET (Electron Transfer) with chlorite to form chlorine dioxide. As chlorine dioxide accumulates in solution, chlorite consumption slows down and ClO 2 reaches a maximum as the system reaches equilibrium. In phosphate buffer at pH 6.90, manganese(IV) oxo accumulates and its reaction with ClO 2 gives ClO 3-. However, at pH 5.00 acetate buffer proton coupled electron transfer (PCET) from chlorite to manganese(IV) oxo is fast and irreversible leading to chlorate formation only via the putative manganese(V) oxo species. These differences underscore how PCET rates affect reaction pathways and mechanism. The ClO 2 product can be collected from the aqueous reaction mixture via purging with an inert gas, allowing for the preparation of chlorine dioxide on-demand.


2010 ◽  
Vol 24 (1) ◽  
pp. 14-21 ◽  
Author(s):  
K. Swarnalatha ◽  
E. Rajkumar ◽  
S. Rajagopal ◽  
R. Ramaraj ◽  
I. Sadhiya Banu ◽  
...  

2011 ◽  
Vol 94 (9) ◽  
pp. 1718-1731 ◽  
Author(s):  
Cvijeta Jakobušić Brala ◽  
Viktor Pilepić ◽  
Ivana Sajenko ◽  
Ana Karković ◽  
Stanko Uršić

Author(s):  
Igor Sviben ◽  
Iva Džeba ◽  
Marija Bonifačić ◽  
Ivan Ljubić

The calculations unravel the role of buffers in the kinetics of the proton-coupled electron transfer reaction between α-hydroxyethyl radical and bromoacetate.


2019 ◽  
Author(s):  
Farnaz A. Shakib ◽  
Pengfei Huo

We apply a recently-developed quasi-diabatic (QD) propagation scheme to simulate proton-coupled electron transfer (PCET) reactions. This scheme enables a direct interface between an accurate diabatic dynamics approach and the adiabatic vibronic states. It explicitly avoids theoretical efforts to pre-construct diabatic states for the transferring electron and proton or reformulate diabatic dynamics methods to the adiabatic representation, both of which are non-trivial tasks. Using partial linearized path-integral approach and symmetrical quasi-classical approach as the diabatic dynamics methods, we demonstrate that the QD propagation scheme provides accurate vibronic dynamics of PCET reactions and reliably predict the correct reaction mechanism without any a priori assumptions. This work demonstrates the possibility to directly simulate challenging PCET reactions by using accurate diabatic dynamics approaches and adiabatic vibronic information.


2019 ◽  
Author(s):  
Farnaz A. Shakib ◽  
Pengfei Huo

We apply a recently-developed quasi-diabatic (QD) propagation scheme to simulate proton-coupled electron transfer (PCET) reactions. This scheme enables a direct interface between an accurate diabatic dynamics approach and the adiabatic vibronic states. It explicitly avoids theoretical efforts to pre-construct diabatic states for the transferring electron and proton or reformulate diabatic dynamics methods to the adiabatic representation, both of which are non-trivial tasks. Using partial linearized path-integral approach and symmetrical quasi-classical approach as the diabatic dynamics methods, we demonstrate that the QD propagation scheme provides accurate vibronic dynamics of PCET reactions and reliably predict the correct reaction mechanism without any a priori assumptions. This work demonstrates the possibility to directly simulate challenging PCET reactions by using accurate diabatic dynamics approaches and adiabatic vibronic information.


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