A curious nematode, Diploscapteroides persicus n. sp. (Nematoda: Rhabditida: Rhabditomorpha), from Iran with a note on the status of the male genital papillae

Nematology ◽  
2015 ◽  
Vol 17 (9) ◽  
pp. 1045-1056 ◽  
Author(s):  
Razieh Ghaemi ◽  
Ebrahim Pourjam ◽  
Sergio Álvarez-Ortega ◽  
Majid Pedram ◽  
Mohammad Reza Atighi
Keyword(s):  
New Species ◽  
Phylogenetic Analyses ◽  
Tail Length ◽  
Molecular Data ◽  
Rrna Genes ◽  
Valid Species ◽  
Female Tail ◽  
The Status ◽  
Species Being ◽  
Male Genital

Diploscapteroides persicus n. sp. is described and illustrated based on morphological, morphometric and molecular data. The new species is mainly characterised by female body length of 469-673 μm, female tail length of 51-99 μm, shape of gubernaculum and spicules and arrangement of male genital papillae. Also, the arrangement of male genital papillae of the new species shows the presence of precloacal papillae, a feature that has not been previously described for the genus. The new species is comparable with all valid species of the genus, namely D. boettgeri, D. brevicauda, D. chitinolabiatus, D. coroniger, D. dacchensis and D. flexuosus, from which the morphological comparisons of the new species with aforementioned species are discussed. Phylogenetic analyses using partial sequences of SSU and LSU rRNA genes were performed for the new species, being the first representative of the genus to be phylogenetically studied using both Bayesian inference (BI) and maximum likelihood (ML) methods, and revealed that D. persicus n. sp. formed a clade with a species of Cephaloboides.

Cymbidium xichouense (Orchidaceae; Epidendroideae), a new species from China: evidence from morphological and molecular data

Phytotaxa ◽  
2021 ◽  
Vol 484 (3) ◽  
pp. 291-297
Author(s):  
XINYU XU ◽  
CHANG-CHUN DING ◽  
WENQI HU ◽  
XIA YU ◽  
YU ZHENG ◽  
...  
Keyword(s):  
New Species ◽  
Yunnan Province ◽  
Phylogenetic Analyses ◽  
Plastid Dna ◽  
Molecular Data ◽  
Morphological Evidence ◽  
The Status ◽  
Nuclear Its ◽  
Morphological And Molecular Data ◽  
A New Species

A new species of Cymbidium (Orchidaceae), Cymbidium xichouense, from Yunnan Province, China, is described and illustrated based on morphological evidence and molecular analyses. The new orchid is morphologically similar to C. qinbeiense, but it has several morphological features that distinguish it from C. qiubeinense and all other recognized species in Cymbidium. Phylogenetic analyses based on nuclear (ITS) and plastid DNA (matK) were conducted, and the results also supported the status of C. xichouense as a new species, which is sister to C. qiubeiense.

A redefinition of the genus Troglocharinus Reitter, 1908, with description of new species (Coleoptera, Leiodidae, Cholevinae, Leptodirini)

Zootaxa ◽  
2021 ◽  
Vol 4926 (2) ◽  
pp. 151-188
Author(s):  
JAVIER FRESNEDA ◽  
VALERIA RIZZO ◽  
JORDI COMAS ◽  
IGNACIO RIBERA
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
Phylogenetic Analyses ◽  
Molecular Data ◽  
Valid Species ◽  
Distribution Area ◽  
Undescribed Species ◽  
Separate Species ◽  
Male And Female ◽  
New Material

We redefine the genus Troglocharinus Reitter, 1908 based on a phylogenetic analysis with a combination of mitochondrial and molecular data. We recovered the current Speonomites mengeli (Jeannel, 1910) and S. mercedesi (Zariquiey, 1922) as valid, separate species within the Troglocharinus clade, not directly related to Speonomites Jeannel, 1910, a finding corroborated by a detailed study of the male and female genitalia. In consequence, we reinstate Speonomus mercedesi Zariquiey, 1922 stat. nov. as a valid species, transfer both of them to the genus Troglocharinus, T. mengeli (Jeannel, 1910) comb. nov. and T. mercedesi (Zariquiey, 1922) comb. nov., and redescribe the genus. The study of new material from the distribution area of the former S. mengeli revealed the presence of two undescribed species, T. sendrai sp. nov. and T. fadriquei sp. nov., which we describe herein. We designate the lectotype of Speonomus vinyasi Escolà, 1971 to fix its identity, as among its syntypes there are two different species. In agreement with the results of the phylogenetic analyses we establish the synonymy between the genus Speonomites and Pallaresiella Fresneda, 1998 syn. nv. 

A new species of Physaloptera (Nematoda: Spirurida) from Proechimys gardneri (Rodentia: Echimyidae) from the Amazon rainforest and molecular phylogenetic analyses of the genus

2019 ◽  
Vol 94 ◽  
Author(s):  
A. Maldonado ◽  
R.O. Simões ◽  
J. São Luiz ◽  
S.F. Costa-Neto ◽  
R.V. Vilela
Keyword(s):  
New Species ◽  
Phylogenetic Analyses ◽  
Molecular Data ◽  
Amazon Rainforest ◽  
Ancestral State ◽  
Intermediate Hosts ◽  
The Status ◽  
Molecular Phylogenetic ◽  
History Of ◽  
A New Species

Abstract Nematodes of the genus Physaloptera are globally distributed and more than 100 species are known. Their life cycle involves insects, including beetles, cockroaches and crickets, as intermediate hosts. This study describes a new species of Physaloptera and reports molecular phylogenetic analyses to determine its relationships within the family Physalopteridae. Physaloptera amazonica n. sp. is described from the stomach of the caviomorph rodent Proechimys gardneri collected in the Amazon rainforest in the state of Acre, Brazil. The species is characterized by the male having the first and second pair of sessile papillae asymmetrically placed, lacking a median papilla-like protuberance between the third pairs of sessile papillae, differentiated by size and shape of the spicules, while females have four uterine branches. For both nuclear 18S rRNA and MT-CO1 gene-based phylogenies, we recovered Turgida sequences forming a clade nested within Physaloptera, thus making Physaloptera paraphyletic to the exclusion of Turgida, suggesting that the latter may have evolved from the former monodelphic ancestral state to a derived polydelphic state, or that some species of Physaloptera may belong to different genera. Relationships between most taxa within Physaloptera were poorly resolved in our phylogenies, producing multifurcations or a star phylogeny. The star-like pattern may be attributed to evolutionary processes where past simultaneous species diversification events took place. Physaloptera amazonica n. sp. formed an independent lineage, separately from the other species of Physaloptera, thus supporting the status of a new species. However, all molecular data suggested a closer relationship with other Neotropical species. In conclusion, we added a new species to this already largely diverse genus Physaloptera, bringing new insights to its phylogenetic relationships. Further analyses, adding more species and markers, should provide a better understanding of the evolutionary history of physalopterids.

An aberrant nematode, Baldwinema n. gen. (Nematoda: Panagrolaimomorpha: Panagrolaimidae), from Iran with description of three new species

Nematology ◽  
2015 ◽  
Vol 17 (8) ◽  
pp. 877-896 ◽  
Author(s):  
Mohammad Reza Atighi ◽  
Ebrahim Pourjam ◽  
Wim Bert ◽  
Majid Pedram ◽  
Razieh Ghaemi ◽  
...  
Keyword(s):  
New Species ◽  
New Genus ◽  
Tail Length ◽  
Thick Wall ◽  
Thin Wall ◽  
Pharyngeal Bulb ◽  
Lateral Field ◽  
Female Tail ◽  
Three New Species ◽  
Male Genital

A new genus of Panagrolaimidae, together with three new species, is proposed based on morphological, morphometric and molecular studies. Baldwinema n. gen. is unique in the Tylenchina by a combination of the following characters: having valvular median bulb, no valve in terminal pharyngeal bulb and absence of stylet. It is further characterised by cylindrical body, thin and finely annulated cuticle, lateral field with two lines (forming a single plain band), fused lips, small longitudinal amphidial openings located on lateral lips, lip region without labial probolae, with six inner and six outer labial and four cephalic papillae (as seen using SEM images), stoma aberrant, cheilostom and gymnostom of equal length, cheilostom with thin wall, gymnostom with clear and thick wall, and stegostom beginning with a tubular thin wall and ending with a thicker wall. Baldwinema ilamense n. gen., n. sp., the type, is characterised by its short post-vulval uterine sac of 7.7 (6.0-9.0) μm long, female tail length of 147 (120-175) μm, shape of gubernaculum, and arrangement of male genital papillae; B. ardabilense n. gen., n. sp. by its short post-vulval uterine sac of 11.5 (9.0-15.0) μm, female tail length of 150 (136-169) μm, shape of gubernaculum, and arrangement of male genital papillae; and B. golestanense n. gen., n. sp. by its long post-vulval uterine sac of 16 (13-21) μm, female tail length of 200 (174-220) μm, shape of gubernaculum, and arrangement of male genital papillae. Phylogenetic analyses based on sequences of the small subunit (SSU) ribosomal RNA gene showed that the new genus is nested within the Panagrolaimidae. However, LSU data did not demonstrate monophyly of the Panagrolaimidae.

scholarly journals A new species of Phrynops from Southern Brazil (Testudines, Chelidae), with comments on the phylogeny of the genus

2015 ◽  
Author(s):  
Natália Rizzo Friol ◽  
Flávio de Barros Molina ◽  
Hussam El Dine Zaher
Keyword(s):  
New Species ◽  
Phylogenetic Analyses ◽  
Taxonomic Status ◽  
Sister Group ◽  
Molecular Data ◽  
Valid Species ◽  
Southern Brazil ◽  
Group Relationships ◽  
A New Species ◽  
Combined Data

Background. Phrynops present four valid species, including P. geoffroanus that might represents a complex of cryptic species. Here, we provide a preliminary analysis of the taxonomy and phylogenetic affinities within Phrynops, with special reference to the taxonomic status of populations of P. geoffroanus and P. tuberosus, and the recognition of a new species from Southern Brazil. Methods. We studied populations from ten Brazilian river basins. A linear morphometric analysis was performed in order to define taxonomically distinct populations. Also, a phylogenetic analysis using morphology and molecular data (sequenced for the genes R35, RAG2, c-mos, cytb, ND4, and 12S) were carried out. Three distinct sets of phylogenetic analyses were performed: parsimony to morphological and combined data, and maximum likelihood to molecular data. Results. The combined analysis shows that Phrynops represents a well supported clade. The set of skeletal data supports Mesoclemmys as the sister group of Phrynops, whereas the molecular and combined data sets show Phrynops as the sister group of a clade composed by all the remaining genera of Chelidae, except Hydromedusa. Our morphological analyses suggest that P. hilarii is the sister group of P. geoffroanus, but in both molecular and combined analyses, P. hilarii appears nested within the clade formed by the populations of P. geoffroanus. Futhermore, P. tuberosus and P. geoffroanus are not distinguishable by the set of osteological and morphometric data. On the other hand, both morphometric and osteological data show that the population of P. geoffroanus from the Paraná river basin is a distinct species. Discussion. The sister group relationships of Phrynops could not be clearly defined due to the different topologies achieved. Phrynops hilarii is included within of P. geoffroanus in both molecular and combined data, but this position has little statistical support and therefore does not express a clear position of P. hilarii within the genus Phrynops. Besides, we were not able to distinguish P. geoffroanus and P. tuberosus. However, a sampling of specific locations are still needed to objectively define the taxonomic status of P. tuberosus. Finally, the population of P. geoffroanus from the Paraná basin is clearly distinct from the remaining populations of this species. Qualitative osteological characters and morphometric results seem to demonstrate that this population is a new species of Phrynops.

Review of the systematics, morphology and distribution of Asian Clawed Salamanders, genus Onychodactylus (Amphibia, Caudata: Hynobiidae), with the description of four new species

Zootaxa ◽  
2012 ◽  
Vol 3465 (1) ◽  
pp. 1 ◽  
Author(s):  
NIKOLAY A. POYARKOV, JR. ◽  
JING CHE ◽  
MI-SOOK MIN ◽  
MASAKI KURO-O ◽  
FANG YAN ◽  
...  
Keyword(s):  
New Species ◽  
Phylogenetic Analyses ◽  
Russian Far East ◽  
Far East ◽  
Molecular Data ◽  
16S Rrna Genes ◽  
Rrna Genes ◽  
Mitochondrial Coi ◽  
Threat Status ◽  
Molecular Phylogenetic

We describe four new species of Asian Clawed salamanders of the genus Onychodactylus (Caudata: Hynobiidae), basedon fresh material collected during fieldwork in Japan, Korea, the Russian Far East and northeastern China between 2003and 2010, as well as older voucher specimens deposited in several museums. Our analyses comprise all species currentlyrecognized within this genus across its entire distribution range. We follow an integrative taxonomic approach bycombining detailed morphological comparative analyses with molecular phylogenetic analyses. We find significantdifferences among species in this genus, based on morphological and molecular data, which resulted in the recognitionand description of four new species within this genus. The new species have uncorrected molecular divergences of over4.5–7.4% and 1.9–4.1% to their closest relatives in the mitochondrial COI and 16S rRNA genes respectively. In themolecular analyses, we found two very divergent lineages in Korea and Japan that need further investigation, as detailedmorphological data are not available for them. We also discuss our approach to delimit species on salamanders. For thenew species described in this group we evaluate their threat status according to IUCN criteria: O. koreanus sp. nov. Min,Poyarkov & Vieites and O. nipponoborealis sp. nov. Kuro-o, Poyarkov & Vieites are classified as Least Concern, whileO. zhaoermii sp. nov. Che, Poyarkov & Yan and O. zhangyapingi sp. nov. Che, Poyarkov, Li & Yan are classified as Vulnerable (Vu2a).

Rotylenchus castilloi n. sp. (Nematoda: Hoplolaimidae), a new species with long stylet from northern Iran

Zootaxa ◽  
2015 ◽  
Vol 3931 (1) ◽  
pp. 88 ◽  
Author(s):  
ATEFEH TALEZARI ◽  
EBRAHIM POURJAM ◽  
AHMAD KHEIRI ◽  
GRACIA LIÉBANAS ◽  
FARZAD ALIRAMAJI ◽  
...  
Keyword(s):  
New Species ◽  
Body Length ◽  
Phylogenetic Analyses ◽  
Molecular Data ◽  
Rrna Genes ◽  
Bisexual Species ◽  
Northern Iran ◽  
Stylet Length ◽  
A New Species ◽  
Specific Sequences

Rotylenchus castilloi n. sp., a new bisexual species is described and illustrated based on morphological, morphometric and molecular data. The new species is characterised by having a hemispherical, continuous lip region with an irregular corncob-like appearance under SEM, very long stylet (62–68 µm), vulva located at 49.7–62.2% of body length from anterior end, with a protruding double epiptygma, a rounded to convex-conoid (rarely bi-lobed) tail with 8–12 annuli and specific sequences of D2-D3 segments of 28S and ITS1-rRNA genes. Differences between the new species and four other species of the genus (R. mesorobustus, R. cazorlaensis, R. magnus and R. jaeni) are discussed. Morphologically, the new species can be separated from these species mostly by its body length, lip region characters, stylet length and location of phasmid. Phylogenetic analyses using 721 bp partial sequences of D2-D3 expansion segments of the 28S and 590 bp ITS1-rRNA genes revealed the new species forming a clade with two isolates of R. eximius and two isolates of R. unisexus, two morphologically unrelated species. 

Cymbidium atrolabium (Orchidaceae; Epidendroideae), a new species from China: evidence from morphological and molecular data

Phytotaxa ◽  
2019 ◽  
Vol 423 (2) ◽  
pp. 87-92
Author(s):  
XING-YU LIAO ◽  
XUE-DIE LIU ◽  
YU-TING JIANG ◽  
DI-YANG ZHANG ◽  
SI-REN LAN ◽  
...  
Keyword(s):  
New Species ◽  
Sequence Data ◽  
Phylogenetic Analyses ◽  
Detailed Comparison ◽  
Molecular Data ◽  
Orchid Species ◽  
The Status ◽  
Morphological And Molecular Data ◽  
Pale Green ◽  
A New Species

A new orchid species, Cymbidium atrolabium, from Yunnan Province, China, is described and illustrated based on morphological and molecular analyses. A detailed comparison between the newly discovered orchid and other members of Cymbidium was conducted. The new plant is similar to C. tortisepalum but differs by having a dark-purple inflorescence with smaller flowers, sepals that are pale green-yellow with a dark-purple broad midrib, petals that are dark-purple with pale green-yellow margins and a smaller, dark purple, densely papillose lip. Phylogenetic analyses based on nuclear ribosomal ITS and plastid (matK, rbcL) sequence data support the status of C. atrolabium as a new species.

Cymbidium brevifolium (Orchidaceae; Epidendroideae), a new species from China: evidence from morphological and molecular data

Phytotaxa ◽  
2020 ◽  
Vol 464 (3) ◽  
pp. 236-242
Author(s):  
ZHUANG ZHOU ◽  
DIYANG ZHANG ◽  
GUI-ZHEN CHEN ◽  
XIA YU ◽  
CHENG-RU LI ◽  
...  
Keyword(s):  
New Species ◽  
Sequence Data ◽  
Phylogenetic Analyses ◽  
Plastid Dna ◽  
Detailed Comparison ◽  
Molecular Data ◽  
The Status ◽  
Nuclear Its ◽  
Morphological And Molecular Data ◽  
A New Species

A new orchid species, Cymbidium brevifolium, from Hubei Province, China, is described and illustrated based on morphological and molecular analyses. A detailed comparison between the newly discovered orchid and other members of Cymbidium was conducted. The new orchid is distinct from all other recognized species in Cymbidium. Phylogenetic analyses based on nuclear (ITS) and plastid DNA (matK and rbcL) sequence data support the status of C. brevifolium as a new species, which is sister to C. faberi.

Revision of Taiwanese and Ryukyuan species of Propristocera (Hymenoptera: Bethylidae), with description of a new species

Zootaxa ◽  
2019 ◽  
Vol 4668 (4) ◽  
pp. 451-474
Author(s):  
HAUCHUAN LIAO ◽  
MAMORU TERAYAMA ◽  
KATSUYUKI EGUCHI
Keyword(s):  
New Species ◽  
Phylogenetic Analyses ◽  
Valid Species ◽  
Gene Markers ◽  
Mitochondrial Coi ◽  
Molecular Phylogenetic ◽  
One New Species ◽  
Male Genital Morphology ◽  
A New Species ◽  
Male Genital

The genus Propristocera Kieffer was very recently revived from the synonymy of the genus Apenesia Westwood, and consists of a total of 25 valid species recorded from the Afrotropical, Oriental and Palaearctic regions. Only two of its species, P. formosimonticola and P. pingtungensis, have been previously recorded from Taiwan. In this study, we examined species of Propristocera collected from Taiwan and the Ryukyus based on external morphology, male genital morphology and molecular phylogenetic analyses, gene markers: nuclear 28SrDNA, mitochondrial COI. In consequence, four species were recognized. Propristocera okinawensis had its record expanded from the Ryukyus to Taiwan, whereas P. kusigematii previously known from the Ryukyus was synonymized under P. pingtungensis, which was known from Taiwan. Furthermore, one new species, Propristocera seediq sp. nov., was discovered in Taiwan and the Ryukyus. 

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