Systematic analysis of leisler’s bat Nyctalus leisleri (Kuhl, 1817) captured from FATA region, Pakistan

Extensive field surveys were carried out to explore the distribution of Leisler’s Bat Nyctalus leisleri (Kuhl, 1819) in selected area of FATA regions, Pakistan. Specimens of Leisler’s Bat Nyctalus leisleri (Kuhl, 1819) (n5) were collected from Kurram Agency (Shublan) (N33.8229788 E70.1634414) at elevation 1427m and Khyber Agency (Landi Kotel) (N34.0909899 E71.1457517) at elevation 1091m for two years survey extending from May 2013 through August 2015. The mean head and body length, hind foot length, ear length and tail length the Nyctalus leisleri specimens captured from the study area was 65.08 ± 1.58 mm, 44.06 ± 0.52 mm, 8.38 ± 0.60 mm, 13.20 ± 0.99 mm and 39.46 ± 1.46 mm, respectively. For molecular analysis the sequences of COI gene were obtained and analyzed. The mean intraspecific divergences of Nyctalus leisleri was 0.04%. The mean interspecific divergences of Nyctalus noctula and Nyctalus leisleri was 0.2%. The mean concentration of each nucleotides was A = (26.3%), T = (32.8%), G = (15.9%) and C = (25.0%). The mean A+T contents were 59.2%and C+G were 40.9%. In the phylogenetic tree Nyctalus leisleri and Nyctalus noctula clustered with significant bootstrap support value.

Prediction of body weight from linear body measurement in two breeds of cattle

The study compared live weight and linear body measurements of two breeds of cattle (White Fulani and Muturu Cattle) and regressed linear body measurements on live weight. A total of eighty-six cattle of forty-three per a breed were reared at the cattle production unit of the Teaching and Research Farm, Akwa Ibom State University – Obio Akpa Campus, Nigeria in a semi intensive management system. Parameters measured were; live weight (LW), face length (FCL), head circumference (HC), ear length (EL), neck length(NL), neck circumference(NC), height at wither(HW), body length(BL), body circumference(BC), hind limb(HL), fore limb(FL), and tail length(TL). The data obtained were subjected to statistical analysis for morphometric traits and prediction was done through linear model regression method using SPSS statistical software package. Breed of cattle significantly (P>0.05) affected all linear body measurements and live weight exception of NL .Linear body Parameters of both breeds were compared. The mean live weight of White Fulani and Muturu were 251.28kg and 149.81kg, respectively. Means of FL, EL, NL, BL, HL, TL and BC, NC and HW of White Fulani were significantly (P<0.01) higher than Muturu breed but the HC of Muturu was significantly (P<0.01) higher than White Fulani breed. Muturu breed had higher R2 of 0.98 in BL and BC than White Fulani breed. In conclusion, White Fulani was considered a larger breed than Muturu cattle. Live weight can be accurately predicted from linear body measurements through BC and BL in both breeds.

Effect of Imidocarb Application on Oxidative DNA Damage Caused by Anaplasmosis

This study was aimed to evaluate DNA fragmentation by using Comet assay in naturally infected sheep with Anaplasmosis before and after treatment with the Comet method, which shows DNA damage specifically. In the study, blood samples were collected from 10 Anaplosmosis infected and 10 healthy sheep. The anaplosmosis was diagnosed by clinical signs and symptoms. The infection was confirmed by Giemsa staining. The blood was collected from control group and infected group before and after the treatment, from the vena jugularis with the appropriate method. The DNA fragmentation was checked by using the Comet assay of blood cells. The data were analysed throught ANNOVA one-way. The result showed higher DNA fragmentation in sick animals diagnosed with anaplasmosis; tail length and tail moment values were found to be statistically significantly higher than the control group. When the data obtained after imidocarb (IMD) application were compared with obtained during the disease, a decreased DNA damage and tail moment was determined, however, these values higher than control. In this study, DNA damage and the extent of this damage were investigated by the Comet assay method using a healthy control group before and after treatment in animals with Anaplasmosis. When the findings obtained from the study were evaluated, it was seen that Anaplasma agents caused DNA damage and with the imidocarb application given for treatment, DNA damage was reduced and results close to healthy individuals were obtained.

A debris flow deposit in Mammoth Cave: field characterization

This work presents an analysis of a debris flow deposit below Earth’s surface in the Mammoth Cave System in Kentucky, USA, and is the first study to characterize an in-cave debris flow to this level of detail. The deposit, named Mt. Ararat by cavers, has a maximum thickness of 7 m, a head-to-tail length of 75 m, and a total volume of about 3400 m3, as determined by terrestrial LiDAR and electrical resistivity surveys. The deposit is chaotic, angular, matrix-supported, and roughly inversely graded, with grain sizes, quantified through various grain-size distribution measuring techniques, ranging from clay through boulders larger than 1 m. The clasts are predominantly Mississippian Big Clifty sandstone, which is allochthonous in this part of the cave. The angularity of the blocks in the deposit indicate that they had not experienced significant erosion; and therefore, are determined to have been transported only a relatively short distance over a short time. The deposit profile is compound in appearance with two heads. We thus interpret this as a debris flow deposit resulting from two distinct flow events, and present a chronology of events leading to the present-day Mt. Ararat in Mammoth Cave. The findings of this work will inform further studies of karst-related erosional events, sediment transport, and deposition at different scales in karst aquifers, as well as the ways in which surface and subsurface processes interact to contribute to karst landscape evolution.

Taxonomy, allometry, sexual dimorphism, and conservation of the trans-Andean water-snake Helicops danieli Amaral 1937 (Serpentes: Dipsadidae: Hydropsini).

The extensive lack of knowledge on the morphological aspects of South American water-snakes, includes a poor understanding of phenotypic parameters, intraspecific variation, and conservation of the trans-Andean Helicops species, Helicops danieli Amaral, 1937. For the first time, we provide a multidisciplinary view using key features (e.g., morphology and niche modeling) to improve the taxonomic recognition of this species, as well as describing ontogenetic color changes, allometry, sexual dimorphism, and the conservation status of this poorly studied snake. First, we emended the morphological diagnosis of H. danieli with 23 characters and detected that juvenile tail length is positively related to allometric growth, and that juveniles differ from adults through the presence of the white nuchal collar. Females are larger than males for snout-vent length, whereas males showed proportionally longer tails and smaller head length growth. Suitable areas for H. danieli are restricted to the trans-Andean regions from the Magdalena drainage to the Caribbean coast, which also showed high values of anthropic impacts. Our multidisciplinary approach provided new insights into this South American water snake’s morphology, intraspecific variation, and distribution.

Adaptive tail-length evolution in deer mice is associated with differential Hoxd13 expression in early development

Variation in the size and number of axial segments underlies much of the diversity in animal body plans. Here, we investigate the evolutionary, genetic, and developmental mechanisms driving tail-length differences between forest and prairie ecotypes of deer mice (Peromyscus maniculatus). We first show that long-tailed forest mice perform better in an arboreal locomotion assay, consistent with tails being important for balance during climbing. The long tails of these forest mice consist of both longer and more caudal vertebrae than prairie mice. Using quantitative genetics, we identify six genomic regions that contribute to differences in total tail length, three of which associate with vertebra length and the other three with vertebra number. For all six loci, the forest allele increases tail length, consistent with the cumulative effect of natural selection. Two of the genomic regions associated with variation in vertebra number contain Hox gene clusters. Of those, we find an allele-specific decrease in Hoxd13 expression in the embryonic tail bud of long-tailed forest mice, consistent with its role in axial elongation. Additionally, we find that forest embryos have more presomitic mesoderm than prairie embryos, and that this correlates with an increase in the number of neuromesodermal progenitors (NMPs), which are modulated by Hox13 paralogs. Together, these results suggest a role for Hoxd13 in the development of natural variation in adaptive morphology on a microevolutionary timescale.

Developmental Table and Three-Dimensional Embryological Image Resource of the Ascidian Ascidiella aspersa

Ascidiella aspersa is an ascidian in the class of chordates—the closest relatives of vertebrates. A. aspersa is a potential model organism for bio-imaging studies due to its extremely transparent embryos as well as is a globally distributed cosmopolitan species. However, there is no standard developmental table for this organism. Here, as a first step to establish A. aspersa as a model organism, we report a standard developmental table as a web-based digital image resource. This resource used confocal laser scanning microscopy to scan more than 3,000 cross-sectional images and 3D-reconstructed images of A. aspersa embryos during embryogenesis. With reference to the standardized developmental table of Ciona intestinalis type A, 26 different developmental stages (Stages 1–26) from fertilized eggs to hatched larvae were redefined for A. aspersa. Cell lineages up to the cleavage period were annotated: The cleavage patterns, the embryonic morphology, and the developmental time were then compared with Ciona. We found that the cleavage patterns and developmental time up to the neurula period in A. aspersa were extremely conserved versus. Ciona. The ratio of the trunk and tail length in the tailbud period were smaller than Ciona indicating a relatively short tail. In addition, the timing of the bending of the tail is earlier than Ciona. This A. aspersa standard 3D digital resource is essential for connecting different omics data to different spatiotemporal hierarchies and is useful for a system-level understanding of chordate development and evolution.

The Impact of Re-Mating Interval and Genotype on Physiological Response of Rabbits after First Kindling

This is an experiment aimed to study the effect of re-mating interval on rabbit does after first kindling on hormonal (insulin, leptin, and T3) and metabolites (triglycerides, urea, and glucose) levels. DNA damage in ovary cells of rabbit does during the 2nd parity was also studied. Two varieties were used: APRI (synthetic line) and Baladi Black (BB, Egyptian breed). A total number of 120 mature rabbit does (60 does for each breed) were 6 months of age and were used at the beginning of the breeding season. Does of each breed were divided into three equal groups according to reproductive rhythm. The 1st group was postpartum (PP). The 2nd group was 11 days after parturition (P11). The 3rd group was post-weaning (PW). There were significant (P&ge;0.05) differences in plasma leptin concentration during 1st parity. The highest value of plasma leptin concentration was recorded by the PW group at mating. Also, there were significant differences in plasma insulin and T3 hormones concentrations of doe rabbits. The highest value of plasma insulin concentration was recorded by the PW group at mating in 1st parity and the highest value of plasma T3 hormone concentration was recorded for the PS group at mating. While there were insignificant differences during 2nd parity in T3 hormone concentration in rabbits, the differences of plasma glucose and triglyceride concentrations of doe rabbits during 1st parity and 2nd parity were significant. However, the highest significant value of plasma glucose concentration was recorded by the PW group at mating. On the other hand, there were insignificant differences in plasma urea concentration of doe rabbits during 1st parity and 2nd parity. Finally, no significant effects were observed on comet length, head diameter, tail length, or DNA % tail.

The Effects of Refilling Additional Rooting Material on Exploration Duration and Tail Damages in Rearing and Fattening Pigs

Pigs housed in commercial barns with slatted floors cannot fully perform their natural behavioral needs such as rooting or exploring. Enrichment materials can stimulate these behaviors in pigs. Here, we investigated whether exploration can be stimulated by offering additional enrichment material, i.e., chopped straw, once compared to four times daily. In two replicates each with four rearing and eight fattening pens, a total of 192 pigs with undocked tails continuously received chopped straw from a dispenser, while a stimulus to explore was given by filling the rooting area of the dispenser either once (R1) or four times (R4) daily with additional chopped straw. The dispensers were equipped with an ultra-high-frequency radio-frequency-identification (UHF-RFID) system in order to record the exploration durations of each individual pig at the dispenser. At four times throughout rearing and fattening, pigs were weighted and tail injuries and length losses were assessed. This resulted in three temporal sections within each replicate, for each of which the difference in tail length to the previous section (Δ-tail length) was calculated. Exploration durations did not change in long-term but increased from rearing throughout fattening. The refillings in which additional chopped straw was offered (R1 vs. R4) did not affect the overall exploration duration during rearing (linear mixed effects model (LME), P = 0.85) or fattening (LME, P = 0.66). However, descriptive evaluations showed that exploration durations decreased within the first 10-min sequences within the hour after refilling the rooting area with additional chopped straw in both treatments (R1 and R4). Exploration durations were affected by week, day, and hour within day during rearing (LME, all factors, P &lt; 0.0001) and fattening (LME, all factors, P &lt; 0.0001). Neither tail injuries nor length losses were affected by the refilling treatment (R1 vs. R4) during rearing (GLMM, both P &gt; 0.1) or fattening (GLMM, both P &gt; 0.1). Offering additional straw four times compared to once a day had no advantage in the present setting with regard to exploration duration and tail damages of pigs. However, refilling the rooting area with additional chopped straw triggered a short-term increase of exploration that decreased within 1 h, thus, exploration was more spread over the day.

Telomere Length and Arterial Stiffness Reflected by Brachial–Ankle Pulse Wave Velocity: A Population-Based Cross-Sectional Study

Telomere (TL) is a biomarker of biological aging, and its shortening is associated with major risk factors for cardiovascular diseases (CVD). This study aimed to identify whether TL is associated with arterial stiffness as reflected by brachial–ankle pulse wave velocity (baPWV). This population-based cross-sectional study involved 1065 individuals in the Iwaki area, Japan. Total TL length and TL G-tail length were measured by hybridization protection assay. The baPWV was measured on the right and left sides using a non-invasive vascular screening device. The associations between TL and baPWV were assessed by multivariate linear regression. Compared with the shortest total TL tertile, the longest total TL group showed a significant decrease in baPWV (lowest vs. highest tertile: adjusted beta: −41.24, 95% confidence interval (CI): −76.81, −5.68). The mean baPWV decreased with a longer TL (TL G-tail length: p trend < 0.001, total TL: p trend < 0.001). TL G-tail and total TL lengths were inversely associated with baPWV, implicating TL shortening in the development of CVD. This study provides evidence of the factors influencing CVD risks at a very early stage when individuals can still take necessary precautions before CVD gives rise to a symptomatic health outcome.