scholarly journals Prosecutor: parameter-free inference of gene function for prokaryotes using DNA microarray data, genomic context and multiple gene annotation sources

BMC Genomics ◽  
2008 ◽  
Vol 9 (1) ◽  
pp. 495 ◽  
Author(s):  
Evert Blom ◽  
Rainer Breitling ◽  
Klaas Hofstede ◽  
Jos BTM Roerdink ◽  
Sacha AFT van Hijum ◽  
...  
2008 ◽  
Vol 5 (2) ◽  
Author(s):  
Krzysztof Borowski ◽  
Jung Soh ◽  
Christoph W. Sensen

SummaryThe need for novel methods of visualizing microarray data is growing. New perspectives are beneficial to finding patterns in expression data. The Bluejay genome browser provides an integrative way of visualizing gene expression datasets in a genomic context. We have now developed the functionality to display multiple microarray datasets simultaneously in Bluejay, in order to provide researchers with a comprehensive view of their datasets linked to a graphical representation of gene function. This will enable biologists to obtain valuable insights on expression patterns, by allowing them to analyze the expression values in relation to the gene locations as well as to compare expression profiles of related genomes or of di erent experiments for the same genome.


2010 ◽  
Vol 24 (S1) ◽  
Author(s):  
Kelly C Parks ◽  
Andrew J Hirning ◽  
Kelia McDonald ◽  
John David N. Dionisio ◽  
Kam D Dahlquist

2005 ◽  
Vol 2 (2) ◽  
pp. 89-98 ◽  
Author(s):  
Hiromi Sato ◽  
Seiichi Ishida ◽  
Kyoko Toda ◽  
Rieko Matsuda ◽  
Yuzuru Hayashi ◽  
...  

2005 ◽  
pp. 293-304
Author(s):  
Wei-min Liu ◽  
Sunhee K. Ro ◽  
Walter H. Koch

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