scholarly journals Genome-wide expression profiling and functional characterization of SCA28 lymphoblastoid cell lines reveal impairment in cell growth and activation of apoptotic pathways

2013 ◽  
Vol 6 (1) ◽  
Author(s):  
Cecilia Mancini ◽  
Paola Roncaglia ◽  
Alessandro Brussino ◽  
Giovanni Stevanin ◽  
Nicola Lo Buono ◽  
...  
2007 ◽  
Vol 16 (14) ◽  
pp. 1682-1698 ◽  
Author(s):  
Yuhei Nishimura ◽  
Christa L. Martin ◽  
Araceli Vazquez-Lopez ◽  
Sarah J. Spence ◽  
Ana Isabel Alvarez-Retuerto ◽  
...  

PLoS ONE ◽  
2021 ◽  
Vol 16 (2) ◽  
pp. e0247170
Author(s):  
Md. Soyib Hasan ◽  
Vishal Singh ◽  
Shiful Islam ◽  
Md. Sifatul Islam ◽  
Raju Ahsan ◽  
...  

Glutathione transferases (GSTs) constitute an ancient, ubiquitous, multi-functional antioxidant enzyme superfamily that has great importance on cellular detoxification against abiotic and biotic stresses as well as plant development and growth. The present study aimed to a comprehensive genome-wide identification and functional characterization of GST family in one of the economically important legume plants—Medicago truncatula. Here, we have identified a total of ninety-two putative MtGST genes that code for 120 proteins. All these members were classified into twelve classes based on their phylogenetic relationship and the presence of structural conserved domain/motif. Among them, 7 MtGST gene pairs were identified to have segmental duplication. Expression profiling of MtGST transcripts revealed their high level of organ/tissue-specific expression in most of the developmental stages and anatomical tissues. The transcripts of MtGSTU5, MtGSTU8, MtGSTU17, MtGSTU46, and MtGSTU47 showed significant up-regulation in response to various abiotic and biotic stresses. Moreover, transcripts of MtGSTU8, MtGSTU14, MtGSTU28, MtGSTU30, MtGSTU34, MtGSTU46 and MtGSTF8 were found to be highly upregulated in response to drought treatment for 24h and 48h. Among the highly stress-responsive MtGST members, MtGSTU17 showed strong affinity towards its conventional substrates reduced glutathione (GSH) and 1‐chloro‐2,4‐dinitrobenzene (CDNB) with the lowest binding energy of—5.7 kcal/mol and -6.5 kcal/mol, respectively. Furthermore, the substrate-binding site residues of MtGSTU17 were found to be highly conserved. These findings will facilitate the further functional and evolutionary characterization of GST genes in Medicago.


PLoS ONE ◽  
2015 ◽  
Vol 10 (8) ◽  
pp. e0135958 ◽  
Author(s):  
Prasanna Vidyasekar ◽  
Pavithra Shyamsunder ◽  
Rajpranap Arun ◽  
Rajalakshmi Santhakumar ◽  
Nand Kishore Kapadia ◽  
...  

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