PmiRDiscVali: an integrated pipeline for plant microRNA discovery and validation

BMC Genomics ◽

10.1186/s12864-019-5478-7 ◽

2019 ◽

Vol 20 (1) ◽

Author(s):

Dongliang Yu ◽

Ying Wan ◽

Hidetaka Ito ◽

Xiaoxia Ma ◽

Tian Xie ◽

...

Keyword(s):

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Faculty Opinions recommendation of Methylation as a crucial step in plant microRNA biogenesis.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1023520.305791 ◽

2005 ◽

Author(s):

Thomas Jenuwein

Keyword(s):

Crucial Step ◽

Microrna Biogenesis ◽

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Faculty Opinions recommendation of SERRATE: a new player on the plant microRNA scene.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1046977.497009 ◽

2006 ◽

Author(s):

Elizabeth Dennis

Keyword(s):

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Quantitating Plant MicroRNA-Mediated Target Repression Using a Dual-Luciferase Transient Expression System

Methods in Molecular Biology - Plant Functional Genomics ◽

10.1007/978-1-4939-2444-8_14 ◽

2015 ◽

pp. 287-303 ◽

Author(s):

Qikun Liu ◽

Michael J. Axtell

Keyword(s):

Transient Expression ◽

Expression System ◽

Transient Expression System ◽

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Global survey on sequence characteristics of plant microRNA genes:Cis-regulatory SNPs in promoters and microRNA precursors

Plant Biosystems - An International Journal Dealing with all Aspects of Plant Biology ◽

10.1080/11263504.2012.713405 ◽

2013 ◽

Vol 147 (2) ◽

pp. 445-450 ◽

Author(s):

C. Shao ◽

H. Wang ◽

Y. Meng

Keyword(s):

Global Survey ◽

Plant Microrna ◽

Sequence Characteristics ◽

Regulatory Snps

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An improved method to quantitate mature plant microRNA in biological matrices using modified periodate treatment and inclusion of internal controls

PLoS ONE ◽

10.1371/journal.pone.0175429 ◽

2017 ◽

Vol 12 (4) ◽

pp. e0175429 ◽

Author(s):

Haiqiu Huang ◽

Jamin Roh ◽

Cindy D. Davis ◽

Thomas T. Y. Wang

Keyword(s):

Internal Controls ◽

Mature Plant ◽

Improved Method ◽

Biological Matrices ◽

Plant Microrna ◽

Periodate Treatment

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Plant microRNA detection using the circular code information

Computational Biology and Chemistry ◽

10.1016/j.compbiolchem.2008.07.004 ◽

2008 ◽

Vol 32 (6) ◽

pp. 400-405 ◽

Author(s):

Ahmed Ahmed ◽

Christian J. Michel

Keyword(s):

Microrna Detection ◽

Plant Microrna ◽

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Plant microRNA-Target Interaction Identification Model Based on the Integration of Prediction Tools and Support Vector Machine

PLoS ONE ◽

10.1371/journal.pone.0103181 ◽

2014 ◽

Vol 9 (7) ◽

pp. e103181 ◽

Author(s):

Jun Meng ◽

Lin Shi ◽

Yushi Luan

Keyword(s):

Support Vector Machine ◽

Support Vector ◽

Microrna Target ◽

Target Interaction ◽

Prediction Tools ◽

Model Based ◽

Plant Microrna ◽

Identification Model

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PMRD: plant microRNA database

Nucleic Acids Research ◽

10.1093/nar/gkp818 ◽

2009 ◽

Vol 38 (suppl_1) ◽

pp. D806-D813 ◽

Author(s):

Zhenhai Zhang ◽

Jingyin Yu ◽

Daofeng Li ◽

Zuyong Zhang ◽

Fengxia Liu ◽

...

Keyword(s):

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Methylation as a Crucial Step in Plant microRNA Biogenesis

Science ◽

10.1126/science.1107130 ◽

2005 ◽

Vol 307 (5711) ◽

pp. 932-935 ◽

Author(s):

B. Yu

Keyword(s):

Crucial Step ◽

Microrna Biogenesis ◽

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PmiRKB: a plant microRNA knowledge base

Nucleic Acids Research ◽

10.1093/nar/gkq721 ◽

2010 ◽

Vol 39 (Database) ◽

pp. D181-D187 ◽

Author(s):

Y. Meng ◽

L. Gou ◽

D. Chen ◽

C. Mao ◽

Y. Jin ◽

...

Keyword(s):

Knowledge Base ◽

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