scholarly journals DIPY: Brain tissue classification

GigaScience ◽  
2016 ◽  
Vol 5 (suppl_1) ◽  
Author(s):  
Julio E. Villalon-Reina ◽  
Eleftherios Garyfallidis
2021 ◽  
Author(s):  
C.U. Sanchez-Guerrero ◽  
N. Gordillo-Castillo ◽  
J.M. Mejia-Munoz ◽  
B. Mederos-Madrazo ◽  
I. Cruz-Aceves

NeuroImage ◽  
2021 ◽  
pp. 118606
Author(s):  
Meera Srikrishna ◽  
Joana B. Pereira ◽  
Rolf A. Heckemann ◽  
Giovanni Volpe ◽  
Danielle van Westen ◽  
...  

2016 ◽  
Vol 10 ◽  
Author(s):  
Richard J. Beare ◽  
Jian Chen ◽  
Claire E. Kelly ◽  
Dimitrios Alexopoulos ◽  
Christopher D. Smyser ◽  
...  

Author(s):  
Koen Van Leemput ◽  
Dirk Vandermeulen ◽  
Frederik Maes ◽  
Siddharth Srivastava ◽  
Emiliano D’Agostino ◽  
...  

2020 ◽  
Vol 10 (16) ◽  
pp. 5686
Author(s):  
Ines A. Cruz-Guerrero ◽  
Raquel Leon ◽  
Daniel U. Campos-Delgado ◽  
Samuel Ortega ◽  
Himar Fabelo ◽  
...  

Hyperspectral imaging is a multidimensional optical technique with the potential of providing fast and accurate tissue classification. The main challenge is the adequate processing of the multidimensional information usually linked to long processing times and significant computational costs, which require expensive hardware. In this study, we address the problem of tissue classification for intraoperative hyperspectral images of in vivo brain tissue. For this goal, two methodologies are introduced that rely on a blind linear unmixing (BLU) scheme for practical tissue classification. Both methodologies identify the characteristic end-members related to the studied tissue classes by BLU from a training dataset and classify the pixels by a minimum distance approach. The proposed methodologies are compared with a machine learning method based on a supervised support vector machine (SVM) classifier. The methodologies based on BLU achieve speedup factors of ~459× and ~429× compared to the SVM scheme, while keeping constant and even slightly improving the classification performance.


2013 ◽  
Vol 2013 ◽  
pp. 1-10 ◽  
Author(s):  
Sindhumol S. ◽  
Anil Kumar ◽  
Kannan Balakrishnan

Multispectral analysis is a potential approach in simultaneous analysis of brain MRI sequences. However, conventional classification methods often fail to yield consistent accuracy in tissue classification and abnormality extraction. Feature extraction methods like Independent Component Analysis (ICA) have been effectively used in recent studies to improve the results. However, these methods were inefficient in identifying less frequently occurred features like small lesions. A new method, Multisignal Wavelet Independent Component Analysis (MW-ICA), is proposed in this work to resolve this issue. First, we applied a multisignal wavelet analysis on input multispectral data. Then, reconstructed signals from detail coefficients were used in conjunction with original input signals to do ICA. Finally, Fuzzy C-Means (FCM) clustering was performed on generated results for visual and quantitative analysis. Reproducibility and accuracy of the classification results from proposed method were evaluated by synthetic and clinical abnormal data. To ensure the positive effect of the new method in classification, we carried out a detailed comparative analysis of reproduced tissues with those from conventional ICA. Reproduced small abnormalities were observed to give good accuracy/Tanimoto Index values, 98.69%/0.89, in clinical analysis. Experimental results recommend MW-ICA as a promising method for improved brain tissue classification.


Sign in / Sign up

Export Citation Format

Share Document