scholarly journals Convolutional neural network optimizes the application of diffusion kurtosis imaging in Parkinson’s disease

2021 ◽  
Vol 8 (1) ◽  
Author(s):  
Junyan Sun ◽  
Ruike Chen ◽  
Qiqi Tong ◽  
Jinghong Ma ◽  
Linlin Gao ◽  
...  

Abstract Objectives The literature regarding the use of diffusion-tensor imaging-derived metrics in the evaluation of Parkinson’s disease (PD) is controversial. This study attempted to assess the feasibility of a deep-learning-based method for detecting alterations in diffusion kurtosis measurements associated with PD. Methods A total of 68 patients with PD and 77 healthy controls were scanned using scanner-A (3 T Skyra) (DATASET-1). Meanwhile, an additional five healthy volunteers were scanned with both scanner-A and an additional scanner-B (3 T Prisma) (DATASET-2). Diffusion kurtosis imaging (DKI) of DATASET-2 had an extra b shell compared to DATASET-1. In addition, a 3D-convolutional neural network (CNN) was trained from DATASET-2 to harmonize the quality of scalar measures of scanner-A to a similar level as scanner-B. Whole-brain unpaired t test and Tract-Based Spatial Statistics (TBSS) were performed to validate the differences between the PD and control groups using the model-fitting method and CNN-based method, respectively. We further clarified the correlation between clinical assessments and DKI results. Results An increase in mean diffusivity (MD) was found in the left substantia nigra (SN) in the PD group. In the right SN, fractional anisotropy (FA) and mean kurtosis (MK) values were negatively correlated with Hoehn and Yahr (H&Y) scales. In the putamen (Put), FA values were positively correlated with the H&Y scales. It is worth noting that these findings were only observed with the deep learning method. There was neither a group difference nor a correlation with clinical assessments in the SN or striatum exceeding the significance level using the conventional model-fitting method. Conclusions The CNN-based method improves the robustness of DKI and can help to explore PD-associated imaging features.

2021 ◽  
Author(s):  
Junyan Sun ◽  
Ruike Chen ◽  
Qiqi Tong ◽  
Jinghong Ma ◽  
Linlin Gao ◽  
...  

Abstract Objectives: This work attempted to assess the feasibility of deep-learning based method in detecting the alterations of diffusion kurtosis measurements associated with Parkinson's disease (PD). Methods: A group of 68 PD patients and 77 healthy controls (HCs) were scanned on the scanner-A (3T Skyra) (DATASET-1). Meanwhile, an additional 5 healthy travelling volunteers were scanned with both the scanner-A and an additional scanner-B (3T Prisma) (DATASET-2). Diffusion kurtosis imaging (DKI) of DATASET-2 has an extra b shell than that of DATASET-1. In addition, a 3D convolutional neural network (CNN) was trained from Dataset 2 to harmonize the quality of scalar measures of scanner-A to a similar level of scanner-B. Whole-brain unpaired t-test and Tract-Based Spatial Statistics (TBSS) was performed to validate the differences between PD and control groups with model fitting method and CNN method respectively. We further clarified the correlation between clinical assessments and DKI results.Results: In the left substantia nigra (SN), an increase of mean diffusivity (MD) was found in PD group. In the right SN, fractional anisotropy (FA) and mean kurtosis (MK) values were negatively correlated with Hoehn & Yahr (H&Y) scales. In the putamen, FA values was positively correlated with H&Y scales. It is worth noting that, these findings were only observed with the deep-learning method. There was neither group difference, nor correlation with clinical assessments in the SN or striatum exceeding the significant level by using the conventional model fitting method.Conclusions: CNN method improves the robustness of DKI and can help to explore PD-associated imaging features.


Diagnostics ◽  
2020 ◽  
Vol 10 (6) ◽  
pp. 402
Author(s):  
Sabyasachi Chakraborty ◽  
Satyabrata Aich ◽  
Hee-Cheol Kim

Parkinson’s Disease is a neurodegenerative disease that affects the aging population and is caused by a progressive loss of dopaminergic neurons in the substantia nigra pars compacta (SNc). With the onset of the disease, the patients suffer from mobility disorders such as tremors, bradykinesia, impairment of posture and balance, etc., and it progressively worsens in the due course of time. Additionally, as there is an exponential growth of the aging population in the world the number of people suffering from Parkinson’s Disease is increasing and it levies a huge economic burden on governments. However, until now no therapeutic method has been discovered for completely eradicating the disease from a person’s body after it’s onset. Therefore, the early detection of Parkinson’s Disease is of paramount importance to tackle the progressive loss of dopaminergic neurons in patients to serve them with a better life. In this study, 3T T1-weighted MRI scans were acquired from the Parkinson’s Progression Markers Initiative (PPMI) database of 406 subjects from baseline visit, where 203 were healthy and 203 were suffering from Parkinson’s Disease. Following data pre-processing, a 3D convolutional neural network (CNN) architecture was developed for learning the intricate patterns in the Magnetic Resonance Imaging (MRI) scans for the detection of Parkinson’s Disease. In the end, it was observed that the developed 3D CNN model performed superiorly by completely aligning with the hypothesis of the study and plotted an overall accuracy of 95.29%, average recall of 0.943, average precision of 0.927, average specificity of 0.9430, f1-score of 0.936, and Receiver Operating Characteristic—Area Under Curve (ROC-AUC) score of 0.98 for both the classes respectively.


IBRO Reports ◽  
2019 ◽  
Vol 6 ◽  
pp. S425
Author(s):  
Shin-Young Kang ◽  
Youngwoon Choi ◽  
Seung-Ho Paik ◽  
V. Zephaniah Phillips ◽  
Beop-Min Kim

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