scholarly journals HIGH-RESOLUTION DOUBLE RESONANCE ACTION SPECTROSCOPY IN ION TRAPS: VIBRATIONAL AND ROTATIONAL FINGERPRINTS OF CH2NH2+

2021 ◽  
Author(s):  
Charles Markus ◽  
Stephan Schlemmer ◽  
Oskar Asvany ◽  
Sven Thorwirth
2019 ◽  
Vol 21 (48) ◽  
pp. 26406-26412 ◽  
Author(s):  
Charles R. Markus ◽  
Sven Thorwirth ◽  
Oskar Asvany ◽  
Stephan Schlemmer

A novel rotation–vibration double resonance scheme was used to measure the first pure rotational transition frequencies of protonated methanimine (CH2NH2+) in a 4 K cryogenic ion trap.


Author(s):  
Helen J. Zeng ◽  
Mark A. Johnson

The ease with which the pH is routinely determined for aqueous solutions masks the fact that the cationic product of Arrhenius acid dissolution, the hydrated proton, or H+(aq), is a remarkably complex species. Here, we review how results obtained over the past 30 years in the study of H+⋅(H2O) n cluster ions isolated in the gas phase shed light on the chemical nature of H+(aq). This effort has also revealed molecular-level aspects of the Grotthuss relay mechanism for positive-charge translocation in water. Recently developed methods involving cryogenic cooling in radiofrequency ion traps and the application of two-color, infrared–infrared (IR–IR) double-resonance spectroscopy have established a clear picture of how local hydrogen-bond topology drives the diverse spectral signatures of the excess proton. This information now enables a new generation of cluster studies designed to unravel the microscopic mechanics underlying the ultrafast relaxation dynamics displayed by H+(aq). Expected final online publication date for the Annual Review of Physical Chemistry, Volume 72 is April 2021. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.


2019 ◽  
Vol 48 (2) ◽  
pp. 924-933 ◽  
Author(s):  
Marcel Heinz ◽  
Nicole Erlenbach ◽  
Lukas S Stelzl ◽  
Grace Thierolf ◽  
Nilesh R Kamble ◽  
...  

Abstract Pulsed electron paramagnetic resonance (EPR) experiments, among them most prominently pulsed electron-electron double resonance experiments (PELDOR/DEER), resolve the conformational dynamics of nucleic acids with high resolution. The wide application of these powerful experiments is limited by the synthetic complexity of some of the best-performing spin labels. The recently developed $\bf\acute{G}$ (G-spin) label, an isoindoline-nitroxide derivative of guanine, can be incorporated non-covalently into DNA and RNA duplexes via Watson-Crick base pairing in an abasic site. We used PELDOR and molecular dynamics (MD) simulations to characterize $\bf\acute{G}$, obtaining excellent agreement between experiments and time traces calculated from MD simulations of RNA and DNA double helices with explicitly modeled $\bf\acute{G}$ bound in two abasic sites. The MD simulations reveal stable hydrogen bonds between the spin labels and the paired cytosines. The abasic sites do not significantly perturb the helical structure. $\bf\acute{G}$ remains rigidly bound to helical RNA and DNA. The distance distributions between the two bound $\bf\acute{G}$ labels are not substantially broadened by spin-label motions in the abasic site and agree well between experiment and MD. $\bf\acute{G}$ and similar non-covalently attached spin labels promise high-quality distance and orientation information, also of complexes of nucleic acids and proteins.


1993 ◽  
Vol 99 (8) ◽  
pp. 5701-5711 ◽  
Author(s):  
Marcel Drabbels ◽  
Johannes Heinze ◽  
J. J. ter Meulen ◽  
W. Leo Meerts

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