scholarly journals DNA Replication Checkpoint Signaling Depends on a Rad53–Dbf4 N-Terminal Interaction in Saccharomyces cerevisiae

Genetics ◽  
2013 ◽  
Vol 194 (2) ◽  
pp. 389-401 ◽  
Author(s):  
Ying-Chou Chen ◽  
Jessica Kenworthy ◽  
Carrie Gabrielse ◽  
Christine Hänni ◽  
Philip Zegerman ◽  
...  
Keyword(s):  
Saccharomyces Cerevisiae ◽  
Dna Replication ◽  
Replication Checkpoint ◽  
Checkpoint Signaling ◽  
Dna Replication Checkpoint

scholarly journals A tel2 Mutation That Destabilizes the Tel2-Tti1-Tti2 Complex Eliminates Rad3ATR Kinase Signaling in the DNA Replication Checkpoint and Leads to Telomere Shortening in Fission Yeast

2019 ◽  
Vol 39 (20) ◽  
Author(s):  
Yong-jie Xu ◽  
Saman Khan ◽  
Adam C. Didier ◽  
Michal Wozniak ◽  
Yufeng Liu ◽  
...  
Keyword(s):  
Dna Replication ◽  
Fission Yeast ◽  
Large Scale ◽  
Gene Encoding ◽  
Telomere Shortening ◽  
Signaling Mechanism ◽  
Replication Checkpoint ◽  
Checkpoint Signaling ◽  
Enhanced Sensitivity ◽  
Dna Replication Checkpoint

ABSTRACT In response to perturbed DNA replication, ATR (ataxia telangiectasia and Rad3-related) kinase is activated to initiate the checkpoint signaling necessary for maintaining genome integrity and cell survival. To better understand the signaling mechanism, we carried out a large-scale genetic screen in fission yeast looking for mutants with enhanced sensitivity to hydroxyurea. From a collection of ∼370 primary mutants, we found a few mutants in which Rad3 (ATR ortholog)-mediated phospho-signaling was significantly compromised. One such mutant carried an uncharacterized mutation in tel2, a gene encoding an essential and highly conserved eukaryotic protein. Previous studies in various biological models have shown that Tel2 mainly functions in Tel2-Tti1-Tti2 (TTT) complex that regulates the steady-state levels of all phosphatidylinositol 3-kinase-like protein kinases, including ATR. We show here that although the levels of Rad3 and Rad3-mediated phospho-signaling in DNA damage checkpoint were moderately reduced in the tel2 mutant, the phospho-signaling in the DNA replication checkpoint was almost completely eliminated. In addition, the tel2 mutation caused telomere shortening. Since the interactions of Tel2 with Tti1 and Tti2 were significantly weakened by the mutation, destabilization of the TTT complex likely contributes to the observed checkpoint and telomere defects.

scholarly journals Separable functions of Tof1/Timeless in intra-S-checkpoint signalling, replisome stability and DNA topological stress

2020 ◽  
Vol 48 (21) ◽  
pp. 12169-12187
Author(s):  
Rose Westhorpe ◽  
Andrea Keszthelyi ◽  
Nicola E Minchell ◽  
David Jones ◽  
Jonathan Baxter
Keyword(s):  
Saccharomyces Cerevisiae ◽  
Dna Replication ◽  
Replication Stress ◽  
Dna Helicase ◽  
The Other ◽  
Checkpoint Activation ◽  
Replication Checkpoint ◽  
Binding Partner ◽  
Dna Replication Checkpoint

Abstract The highly conserved Tof1/Timeless proteins minimise replication stress and promote normal DNA replication. They are required to mediate the DNA replication checkpoint (DRC), the stable pausing of forks at protein fork blocks, the coupling of DNA helicase and polymerase functions during replication stress (RS) and the preferential resolution of DNA topological stress ahead of the fork. Here we demonstrate that the roles of the Saccharomyces cerevisiae Timeless protein Tof1 in DRC signalling and resolution of DNA topological stress require distinct N and C terminal regions of the protein, whereas the other functions of Tof1 are closely linked to the stable interaction between Tof1 and its constitutive binding partner Csm3/Tipin. By separating the role of Tof1 in DRC from fork stabilisation and coupling, we show that Tof1 has distinct activities in checkpoint activation and replisome stability to ensure the viable completion of DNA replication following replication stress.

scholarly journals Mcm2-7 Is an Active Player in the DNA Replication Checkpoint Signaling Cascade via Proposed Modulation of Its DNA Gate

2015 ◽  
Vol 35 (12) ◽  
pp. 2131-2143 ◽  
Author(s):  
Feng-Ling Tsai ◽  
Sriram Vijayraghavan ◽  
Joseph Prinz ◽  
Heather K. MacAlpine ◽  
David M. MacAlpine ◽  
...  
Keyword(s):  
Dna Replication ◽  
Conformational Change ◽  
Replication Checkpoint ◽  
Checkpoint Signaling ◽  
Kinase Activation ◽  
Checkpoint Response ◽  
Active Player ◽  
Dna Replication Checkpoint ◽  
Replication Factors

The DNA replication checkpoint (DRC) monitors and responds to stalled replication forks to prevent genomic instability. How core replication factors integrate into this phosphorylation cascade is incompletely understood. Here, through analysis of a uniquemcmallele targeting a specific ATPase active site (mcm2DENQ), we show that the Mcm2-7 replicative helicase has a novel DRC function as part of the signal transduction cascade. This allele exhibits normal downstream mediator (Mrc1) phosphorylation, implying DRC sensor kinase activation. However, the mutant also exhibits defective effector kinase (Rad53) activation and classic DRC phenotypes. Our previousin vitroanalysis showed that themcm2DENQmutation prevents a specific conformational change in the Mcm2-7 hexamer. We infer that this conformational change is required for its DRC role and propose that it allosterically facilitates Rad53 activation to ensure a replication-specific checkpoint response.

scholarly journals Increased Genome Instability and Telomere Length in the elg1-Deficient Saccharomyces cerevisiae Mutant Are Regulated by S-Phase Checkpoints

2004 ◽  
Vol 3 (6) ◽  
pp. 1557-1566 ◽  
Author(s):  
Soma Banerjee ◽  
Kyungjae Myung
Keyword(s):  
Saccharomyces Cerevisiae ◽  
Dna Damage ◽  
Dna Replication ◽  
Telomere Length ◽  
Genome Instability ◽  
Dna Recombination ◽  
Cell Cycle Checkpoints ◽  
Telomere Maintenance ◽  
Replication Checkpoint ◽  
Dna Replication Checkpoint

ABSTRACT Gross chromosomal rearrangements (GCRs) are frequently observed in cancer cells. Abnormalities in different DNA metabolism including DNA replication, cell cycle checkpoints, chromatin remodeling, telomere maintenance, and DNA recombination and repair cause GCRs in Saccharomyces cerevisiae. Recently, we used genome-wide screening to identify several genes the deletion of which increases GCRs in S. cerevisiae. Elg1, which was discovered during this screening, functions in DNA replication by participating in an alternative replication factor complex. Here we further characterize the GCR suppression mechanisms observed in the elg1Δ mutant strain in conjunction with the telomere maintenance role of Elg1. The elg1Δ mutation enhanced spontaneous DNA damage and resulted in GCR formation. However, DNA damage due to inactivation of Elg1 activates the intra-S checkpoints, which suppress further GCR formation. The intra-S checkpoints activated by the elg1Δ mutation also suppress GCR formation in strains defective in the DNA replication checkpoint. Lastly, the elg1Δ mutation increases telomere size independently of other previously known telomere maintenance proteins such as the telomerase inhibitor Pif1 or the telomere size regulator Rif1. The increase in telomere length caused by the elg1Δ mutation was suppressed by a defect in the DNA replication checkpoint, which suggests that DNA replication surveillance by Dpb11-Mec1/Tel1-Dun1 also has an important role in telomere length regulation.

scholarly journals Checkpoint proteins control morphogenetic events during DNA replication stress in Saccharomyces cerevisiae

2006 ◽  
Vol 175 (5) ◽  
pp. 729-741 ◽  
Author(s):  
Jorrit M. Enserink ◽  
Marcus B. Smolka ◽  
Huilin Zhou ◽  
Richard D. Kolodner
Keyword(s):  
Saccharomyces Cerevisiae ◽  
Dna Replication ◽  
Cell Morphology ◽  
Replication Fork ◽  
Replication Stress ◽  
Replication Checkpoint ◽  
Checkpoint Proteins ◽  
Checkpoint Kinases ◽  
Dna Replication Checkpoint ◽  
Dna Replication Stress

In response to DNA replication stress in Saccharomyces cerevisiae, the DNA replication checkpoint maintains replication fork stability, prevents precocious chromosome segregation, and causes cells to arrest as large-budded cells. The checkpoint kinases Mec1 and Rad53 act in this checkpoint. Treatment of mec1 or rad53Δ mutants with replication inhibitors results in replication fork collapse and inappropriate partitioning of partially replicated chromosomes, leading to cell death. We describe a previously unappreciated function of various replication stress checkpoint proteins, including Rad53, in the control of cell morphology. Checkpoint mutants have aberrant cell morphology and cell walls, and show defective bud site selection. Rad53 shows genetic interactions with septin ring pathway components, and, along with other checkpoint proteins, controls the timely degradation of Swe1 during replication stress, thereby facilitating proper bud growth. Thus, checkpoint proteins play an important role in coordinating morphogenetic events with DNA replication during replication stress.

scholarly journals Separable functions of Tof1/Timeless in intra-S-checkpoint signalling, replisome stability and DNA topological stress

2019 ◽  
Author(s):  
Rose Westhorpe ◽  
Andrea Keszthelyi ◽  
Nicola E. Minchell ◽  
David Jones ◽  
Jonathan Baxter
Keyword(s):  
Saccharomyces Cerevisiae ◽  
Dna Replication ◽  
Replication Stress ◽  
Dna Helicase ◽  
The Other ◽  
Checkpoint Activation ◽  
Replication Checkpoint ◽  
Binding Partner ◽  
Dna Replication Checkpoint

AbstractThe highly conserved Tof1/Timeless proteins minimise replication stress and promote normal DNA replication. They are required to mediate the DNA replication checkpoint (DRC), the stable pausing of forks at protein fork blocks, the coupling of DNA helicase and polymerase functions during replication stress (RS) and the preferential resolution of DNA topological stress ahead of the fork. Here we demonstrate that the roles of the Saccharomyces cerevisiae Timeless protein Tof1 in DRC signalling and resolution of DNA topological stress require distinct N and C terminal regions of the protein, whereas the other functions of Tof1 are closely linked to the stable interaction between Tof1 and its constitutive binding partner Csm3/Tipin. By separating the role of Tof1 in DRC from fork stabilisation and coupling, we show that Tof1 has distinct activities in checkpoint activation and replisome stability to ensure the viable completion of DNA replication following replication stress.

scholarly journals RAD53 Regulates DBF4 Independently of Checkpoint Function in Saccharomyces cerevisiae

Genetics ◽  
1999 ◽  
Vol 151 (3) ◽  
pp. 965-977 ◽  
Author(s):  
Paul R Dohrmann ◽  
Guy Oshiro ◽  
Marianne Tecklenburg ◽  
Robert A Sclafani
Keyword(s):  
Saccharomyces Cerevisiae ◽  
Dna Replication ◽  
State Level ◽  
Complementation Group ◽  
Temperature Sensitive ◽  
Replication Checkpoint ◽  
Dna Replication Checkpoint ◽  
Complementation Groups ◽  
Initiation Of Dna Replication ◽  
Replication Function

Abstract The Cdc7p and Dbf4p proteins form an active kinase complex in Saccharomyces cerevisiae that is essential for the initiation of DNA replication. A genetic screen for mutations that are lethal in combination with cdc7-1 led to the isolation of seven lsd (lethal with seven defect) complementation groups. The lsd7 complementation group contained two temperature-sensitive dbf4 alleles. The lsd1 complementation group contained a new allele of RAD53, which was designated rad53-31. RAD53 encodes an essential protein kinase that is required for the activation of DNA damage and DNA replication checkpoint pathways, and that is implicated as a positive regulator of S phase. Unlike other RAD53 alleles, we demonstrate that the rad53-31 allele retains an intact checkpoint function. Thus, the checkpoint function and the DNA replication function of RAD53 can be functionally separated. The activation of DNA replication through RAD53 most likely occurs through DBF4. Two-hybrid analysis indicates that the Rad53p protein binds to Dbf4p. Furthermore, the steady-state level of DBF4 message and Dbf4p protein is reduced in several rad53 mutant strains, indicating that RAD53 positively regulates DBF4. These results suggest that two different functions of the cell cycle, initiation of DNA replication and the checkpoint function, can be coordinately regulated through the common intermediate RAD53.

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