scholarly journals Transformer-based deep neural network language models for Alzheimer’s disease detection from targeted speech

2020 ◽  
Author(s):  
Alireza Roshanzamir ◽  
Hamid Aghajan ◽  
Mahdieh Soleymani Baghshah

Abstract Background: We developed transformer-based deep learning models based on natural language processing for early diagnosis of Alzheimer’s disease from the picture description test.Methods: The lack of large datasets poses the most important limitation for using complex models that do not require feature engineering. Transformer-based pre-trained deep language models have recently made a large leap in NLP research and application. These models are pre-trained on available large datasets to understand natural language texts appropriately, and are shown to subsequently perform well on classification tasks with small training sets. The overall classification model is a simple classifier on top of the pre-trained deep language model.Results: The models are evaluated on picture description test transcripts of the Pitt corpus, which contains data of 170 AD patients with 257 interviews and 99 healthy controls with 243 interviews. The large bidirectional encoder representations from transformers (BERTLarge) embedding with logistic regression classifier achieves classification accuracy of 88.08%, which improves thestate-of-the-art by 2.48%.Conclusions: Using pre-trained language models can improve AD prediction. This not only solves the problem of lack of sufficiently large datasets, but also reduces the need for expert-defined features.

2020 ◽  
Author(s):  
Alireza Roshanzamir ◽  
Hamid Aghajan ◽  
Mahdieh Soleymani Baghshah

Abstract Background: We developed transformer-based deep learning models based on natural language processing for early diagnosis of Alzheimer’s disease from the picture description test.Methods: The lack of large datasets poses the most important limitation for using complex models that do not require feature engineering. Transformer-based pre-trained deep language models have recently made a large leap in NLP research and application. These models are pre-trained on available large datasets to understand natural language texts appropriately, and are shown to subsequently perform well on classification tasks with small training sets. The overall classification model is a simple classifier on top of the pre-trained deep language model.Results: The models are evaluated on picture description test transcripts of the Pitt corpus, which contains data of 170 AD patients with 257 interviews and 99 healthy controls with 243 interviews. The large bidirectional encoder representations from transformers (BERTLarge) embedding with logistic regression classifier achieves classification accuracy of 88.08%, which improves the state-of-the-art by 2.48%.Conclusions: Using pre-trained language models can improve AD prediction. This not only solves the problem of lack of sufficiently large datasets, but also reduces the need for expert-defined features.


2021 ◽  
Vol 21 (1) ◽  
Author(s):  
Alireza Roshanzamir ◽  
Hamid Aghajan ◽  
Mahdieh Soleymani Baghshah

Abstract Background We developed transformer-based deep learning models based on natural language processing for early risk assessment of Alzheimer’s disease from the picture description test. Methods The lack of large datasets poses the most important limitation for using complex models that do not require feature engineering. Transformer-based pre-trained deep language models have recently made a large leap in NLP research and application. These models are pre-trained on available large datasets to understand natural language texts appropriately, and are shown to subsequently perform well on classification tasks with small training sets. The overall classification model is a simple classifier on top of the pre-trained deep language model. Results The models are evaluated on picture description test transcripts of the Pitt corpus, which contains data of 170 AD patients with 257 interviews and 99 healthy controls with 243 interviews. The large bidirectional encoder representations from transformers (BERTLarge) embedding with logistic regression classifier achieves classification accuracy of 88.08%, which improves the state-of-the-art by 2.48%. Conclusions Using pre-trained language models can improve AD prediction. This not only solves the problem of lack of sufficiently large datasets, but also reduces the need for expert-defined features.


2021 ◽  
Author(s):  
Alireza Roshanzamir ◽  
Hamid Aghajan ◽  
Mahdieh Soleymani Baghshah

Abstract Background: We developed transformer-based deep learning models based on natural language processing for early risk assessment of Alzheimer’s disease from the picture description test.Methods: The lack of large datasets poses the most important limitation for using complex models that do not require feature engineering. Transformer-based pre-trained deep language models have recently made a large leap in NLP research and application. These models are pre-trained on available large datasets to understand natural language texts appropriately, and are shown to subsequently perform well on classification tasks with small training sets. The overall classification model is a simple classifier on top of the pre-trained deep language model.Results: The models are evaluated on picture description test transcripts of the Pitt corpus, which contains data of 170 AD patients with 257 interviews and 99 healthy controls with 243 interviews. The large bidirectional encoder representations from transformers (BERTLarge) embedding with logistic regression classifier achieves classification accuracy of 88.08%, which improves the state-of-the-art by 2.48%.Conclusions: Using pre-trained language models can improve AD prediction. This not only solves the problem of lack of sufficiently large datasets, but also reduces the need for expert-defined features.


Author(s):  
A. Evtushenko

Machine learning language models are combinations of algorithms and neural networks designed for text processing composed in natural language (Natural Language Processing, NLP).  In 2020, the largest language model from the artificial intelligence research company OpenAI, GPT-3, was released, the maximum number of parameters of which reaches 175 billion. The parameterization of the model increased by more than 100 times made it possible to improve the quality of generated texts to a level that is hard to distinguish from human-written texts. It is noteworthy that this model was trained on a training dataset mainly collected from open sources on the Internet, the volume of which is estimated at 570 GB.  This article discusses the problem of memorizing critical information, in particular, personal data of individual, at the stage of training large language models (GPT-2/3 and derivatives), and also describes an algorithmic approach to solving this problem, which consists in additional preprocessing training dataset and refinement of the model inference in the context of generating pseudo-personal data and embedding into the results of work on the tasks of summarization, text generation, formation of answers to questions and others from the field of seq2seq.


2021 ◽  
Vol 13 ◽  
Author(s):  
Hali Lindsay ◽  
Johannes Tröger ◽  
Alexandra König

Alzheimer’s disease (AD) is a pervasive neurodegenerative disease that affects millions worldwide and is most prominently associated with broad cognitive decline, including language impairment. Picture description tasks are routinely used to monitor language impairment in AD. Due to the high amount of manual resources needed for an in-depth analysis of thereby-produced spontaneous speech, advanced natural language processing (NLP) combined with machine learning (ML) represents a promising opportunity. In this applied research field though, NLP and ML methodology do not necessarily ensure robust clinically actionable insights into cognitive language impairment in AD and additional precautions must be taken to ensure clinical-validity and generalizability of results. In this study, we add generalizability through multilingual feature statistics to computational approaches for the detection of language impairment in AD. We include 154 participants (78 healthy subjects, 76 patients with AD) from two different languages (106 English speaking and 47 French speaking). Each participant completed a picture description task, in addition to a battery of neuropsychological tests. Each response was recorded and manually transcribed. From this, task-specific, semantic, syntactic and paralinguistic features are extracted using NLP resources. Using inferential statistics, we determined language features, excluding task specific features, that are significant in both languages and therefore represent “generalizable” signs for cognitive language impairment in AD. In a second step, we evaluated all features as well as the generalizable ones for English, French and both languages in a binary discrimination ML scenario (AD vs. healthy) using a variety of classifiers. The generalizable language feature set outperforms the all language feature set in English, French and the multilingual scenarios. Semantic features are the most generalizable while paralinguistic features show no overlap between languages. The multilingual model shows an equal distribution of error in both English and French. By leveraging multilingual statistics combined with a theory-driven approach, we identify AD-related language impairment that generalizes beyond a single corpus or language to model language impairment as a clinically-relevant cognitive symptom. We find a primary impairment in semantics in addition to mild syntactic impairment, possibly confounded by additional impaired cognitive functions.


2020 ◽  
Vol 34 (05) ◽  
pp. 7456-7463 ◽  
Author(s):  
Zied Bouraoui ◽  
Jose Camacho-Collados ◽  
Steven Schockaert

One of the most remarkable properties of word embeddings is the fact that they capture certain types of semantic and syntactic relationships. Recently, pre-trained language models such as BERT have achieved groundbreaking results across a wide range of Natural Language Processing tasks. However, it is unclear to what extent such models capture relational knowledge beyond what is already captured by standard word embeddings. To explore this question, we propose a methodology for distilling relational knowledge from a pre-trained language model. Starting from a few seed instances of a given relation, we first use a large text corpus to find sentences that are likely to express this relation. We then use a subset of these extracted sentences as templates. Finally, we fine-tune a language model to predict whether a given word pair is likely to be an instance of some relation, when given an instantiated template for that relation as input.


2021 ◽  
Vol 13 ◽  
Author(s):  
Aparna Balagopalan ◽  
Benjamin Eyre ◽  
Jessica Robin ◽  
Frank Rudzicz ◽  
Jekaterina Novikova

Introduction: Research related to the automatic detection of Alzheimer's disease (AD) is important, given the high prevalence of AD and the high cost of traditional diagnostic methods. Since AD significantly affects the content and acoustics of spontaneous speech, natural language processing, and machine learning provide promising techniques for reliably detecting AD. There has been a recent proliferation of classification models for AD, but these vary in the datasets used, model types and training and testing paradigms. In this study, we compare and contrast the performance of two common approaches for automatic AD detection from speech on the same, well-matched dataset, to determine the advantages of using domain knowledge vs. pre-trained transfer models.Methods: Audio recordings and corresponding manually-transcribed speech transcripts of a picture description task administered to 156 demographically matched older adults, 78 with Alzheimer's Disease (AD) and 78 cognitively intact (healthy) were classified using machine learning and natural language processing as “AD” or “non-AD.” The audio was acoustically-enhanced, and post-processed to improve quality of the speech recording as well control for variation caused by recording conditions. Two approaches were used for classification of these speech samples: (1) using domain knowledge: extracting an extensive set of clinically relevant linguistic and acoustic features derived from speech and transcripts based on prior literature, and (2) using transfer-learning and leveraging large pre-trained machine learning models: using transcript-representations that are automatically derived from state-of-the-art pre-trained language models, by fine-tuning Bidirectional Encoder Representations from Transformer (BERT)-based sequence classification models.Results: We compared the utility of speech transcript representations obtained from recent natural language processing models (i.e., BERT) to more clinically-interpretable language feature-based methods. Both the feature-based approaches and fine-tuned BERT models significantly outperformed the baseline linguistic model using a small set of linguistic features, demonstrating the importance of extensive linguistic information for detecting cognitive impairments relating to AD. We observed that fine-tuned BERT models numerically outperformed feature-based approaches on the AD detection task, but the difference was not statistically significant. Our main contribution is the observation that when tested on the same, demographically balanced dataset and tested on independent, unseen data, both domain knowledge and pretrained linguistic models have good predictive performance for detecting AD based on speech. It is notable that linguistic information alone is capable of achieving comparable, and even numerically better, performance than models including both acoustic and linguistic features here. We also try to shed light on the inner workings of the more black-box natural language processing model by performing an interpretability analysis, and find that attention weights reveal interesting patterns such as higher attribution to more important information content units in the picture description task, as well as pauses and filler words.Conclusion: This approach supports the value of well-performing machine learning and linguistically-focussed processing techniques to detect AD from speech and highlights the need to compare model performance on carefully balanced datasets, using consistent same training parameters and independent test datasets in order to determine the best performing predictive model.


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