1P108 Understanding the Mechanism of ATP-dependent protein unfolding and translocation by the Molecular Dynamics Simulation

Protein Unfolding ◽

Dynamics Simulation ◽

1P074 ATP dependent protein unfolding and translocation by the molecular dynamics simulation

Seibutsu Butsuri ◽

10.2142/biophys.44.s48_2 ◽

2004 ◽

Vol 44 (supplement) ◽

pp. S48

Author(s):

S. Takeuchi ◽

N. Koga ◽

S. Takada

Keyword(s):

Molecular Dynamics ◽

Protein Unfolding ◽

Dynamics Simulation ◽

2020 IEEE 15th International Conference on Nano/Micro Engineered and Molecular System (NEMS) ◽

Molecular Dynamics Simulation for Protein Unfolding

10.1109/nems50311.2020.9265552 ◽

2020 ◽

Author(s):

Meng Yu ◽

Wei Si ◽

Jingjie Sha

Keyword(s):

Molecular Dynamics ◽

Protein Unfolding ◽

Molecular docking and molecular dynamics simulation of anticancer active ligand ‘3,5,7,3′,5′-pentahydroxy-flavanonol-3-O-α-L-rhamnopyranoside’ from Bauhinia strychnifolia Craib to the cyclin-dependent protein kinase

Journal of King Saud University - Science ◽

10.1016/j.jksus.2019.05.004 ◽

2020 ◽

Vol 32 (1) ◽

pp. 891-895

Author(s):

Mohammad Ajmal Ali

Keyword(s):

Molecular Dynamics ◽

Molecular Docking ◽

Protein Kinase ◽

Dynamics Simulation ◽

Dependent Protein Kinase ◽

Active Ligand ◽

Elucidation of GB1 Protein Unfolding Mechanism via a Long-timescale Molecular Dynamics Simulation

IOP Conference Series Earth and Environmental Science ◽

10.1088/1755-1315/31/1/012008 ◽

2016 ◽

Vol 31 ◽

pp. 012008

Author(s):

T Sumaryada ◽

J Hati ◽

S T Wahyudi ◽

N D Malau ◽

K N Sawitri

Keyword(s):

Molecular Dynamics ◽

Protein Unfolding ◽

Curcumin specifically binds to the human calcium–calmodulin-dependent protein kinase IV: fluorescence and molecular dynamics simulation studies

Journal of Biomolecular Structure and Dynamics ◽

10.1080/07391102.2015.1046934 ◽

2015 ◽

Vol 34 (3) ◽

pp. 572-584 ◽

Cited By ~ 49

Author(s):

Nasimul Hoda ◽

Huma Naz ◽

Ehtesham Jameel ◽

Ashutosh Shandilya ◽

Sharmistha Dey ◽

...

Keyword(s):

Molecular Dynamics ◽

Protein Kinase ◽

Dynamics Simulation ◽

Simulation Studies ◽

Dependent Protein Kinase ◽

Calcium Calmodulin Dependent ◽

Protein Unfolding Transitions in an Intrinsically Unstable Annexin Domain: Molecular Dynamics Simulation and Comparison with Nuclear Magnetic Resonance Data

Biophysical Journal ◽

10.1016/s0006-3495(02)75200-4 ◽

2002 ◽

Vol 83 (2) ◽

pp. 681-698 ◽

Cited By ~ 6

Author(s):

Tru Huynh ◽

Jeremy C. Smith ◽

Alain Sanson

Keyword(s):

Molecular Dynamics ◽

Nuclear Magnetic Resonance ◽

Magnetic Resonance ◽

Protein Unfolding ◽

Nuclear Magnetic Resonance Data ◽

Dynamics Simulation ◽

Magnetic Resonance Data ◽

Resonance Data ◽

Nuclear Magnetic

Hydration-Dependent Protein Dynamics Revealed by Molecular Dynamics Simulation of Crystalline Staphylococcal Nuclease

The Journal of Physical Chemistry B ◽

10.1021/jp710039p ◽

2008 ◽

Vol 112 (11) ◽

pp. 3522-3528 ◽

Cited By ~ 10

Author(s):

Yasumasa Joti ◽

Hiroshi Nakagawa ◽

Mikio Kataoka ◽

Akio Kitao

Keyword(s):

Molecular Dynamics ◽

Protein Dynamics ◽

Staphylococcal Nuclease ◽

Dynamics Simulation ◽

Application of principal component analysis in protein unfolding: An all-atom molecular dynamics simulation study

The Journal of Chemical Physics ◽

10.1063/1.2796165 ◽

2007 ◽

Vol 127 (16) ◽

pp. 165103 ◽

Cited By ~ 21

Author(s):

Atanu Das ◽

Chaitali Mukhopadhyay

Keyword(s):

Molecular Dynamics ◽

Principal Component Analysis ◽

Simulation Study ◽

Protein Unfolding ◽

Principal Component ◽

Component Analysis ◽

Rotational dynamics and velocity segregation in plastic KCIO4: a molecular dynamics simulation

Molecular Physics ◽

10.1080/00268979809482256 ◽

1998 ◽

Vol 93 (5) ◽

pp. 703-711

Author(s):

F. AFFOUARD ◽

PH. DEPONDT

Keyword(s):

Molecular Dynamics ◽

Rotational Dynamics ◽

Molecular dynamics simulation of the dynamics of supercooled silica

Philosophical Magazine B ◽

10.1080/014186398259374 ◽

1998 ◽

Vol 77 (2) ◽

pp. 297-303 ◽

Cited By ~ 24

Author(s):

J. Horbach, W. Kob, K. Binder

Keyword(s):

Molecular Dynamics ◽