3D1136 Molecular dynamics simulation study of diubiquitins : Analysis of ubiquitin-ubiquitin interactions(3D Protein: Structure & Function 2,The 49th Annual Meeting of the Biophysical Society of Japan)

Structure Function ◽

Annual Meeting ◽

Simulation Study ◽

Dynamics Simulation ◽

3D Protein Structure ◽

3P043 Relaxation Mode Analysis of a protein using a Molecular Dynamics Simulation(Protein: Structure & Function,The 48th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.50.s152_4 ◽

2010 ◽

Vol 50 (supplement2) ◽

pp. S152

Author(s):

Toshiki Nagai ◽

Ayori Mitsutake ◽

Hiroshi Takano

Keyword(s):

Molecular Dynamics ◽

Protein Structure ◽

Structure Function ◽

Annual Meeting ◽

Dynamics Simulation ◽

Mode Analysis ◽

Relaxation Mode ◽

2PT134 Molecular dynamics simulation study of Lys48-linked diubiquitin in compact conformation(The 50th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.52.s127_5 ◽

2012 ◽

Vol 52 (supplement) ◽

pp. S127

Author(s):

Sotaro Fuchigami ◽

Mitsunori Ikeguchi ◽

Akinori Kidera

Keyword(s):

Molecular Dynamics ◽

Annual Meeting ◽

Simulation Study ◽

Dynamics Simulation ◽

Biophysical Society ◽

Compact Conformation

3D1124 Simulation study of transmission mechanism of allosteric interaction(3D Protein: Structure & Function 2,The 49th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.51.s118_5 ◽

2011 ◽

Vol 51 (supplement) ◽

pp. S118

Author(s):

Ikuo Kurisaki ◽

Masayoshi Takayanagi ◽

Masataka Nagaoka

Keyword(s):

Protein Structure ◽

Structure Function ◽

Annual Meeting ◽

Simulation Study ◽

Transmission Mechanism ◽

3D Protein Structure ◽

Allosteric Interaction ◽

1P-033 Does a non-mechanosensitive ion channel really not open by mechanical force? : A coarse grained molecular dynamics simulation study(Protein:Structure & Function, The 47th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.49.s68_4 ◽

2009 ◽

Vol 49 (supplement) ◽

pp. S68

Author(s):

Ken Takahashi ◽

Masahiro Sokabe

Keyword(s):

Molecular Dynamics ◽

Ion Channel ◽

Annual Meeting ◽

Simulation Study ◽

Mechanical Force ◽

Dynamics Simulation ◽

Coarse Grained ◽

Biophysical Society ◽

Mechanosensitive Ion Channel

1P-023 Molecular Dynamics Simulation Study of Diubiquitins with Different Linkages(Protein:Structure & Function, The 47th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.49.s67_1 ◽

2009 ◽

Vol 49 (supplement) ◽

pp. S67

Author(s):

Sotaro Fuchigami ◽

Mitsunori Ikeguchi ◽

Akinori Kidera

Keyword(s):

Molecular Dynamics ◽

Annual Meeting ◽

Simulation Study ◽

Dynamics Simulation ◽

3PT006 Transcription factor p53 searching dynamics on nucleosomal DNA: Coarse-grained molecular dynamics simulation study(The 50th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.52.s156_3 ◽

2012 ◽

Vol 52 (supplement) ◽

pp. S156

Author(s):

Tsuyoshi Terakawa ◽

Shoji Takada

Keyword(s):

Molecular Dynamics ◽

Transcription Factor ◽

Annual Meeting ◽

Simulation Study ◽

Dynamics Simulation ◽

Coarse Grained ◽

Nucleosomal Dna ◽

Biophysical Society ◽

Transcription Factor P53

1TA1-06 Does a non-mechanosensitive ion channel really not open by mechanical force? : A coarse grained molecular dynamics simulation study(The 47th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.49.s25_3 ◽

2009 ◽

Vol 49 (supplement) ◽

pp. S25

Author(s):

Ken Takahashi ◽

Masahiro Sokabe

Keyword(s):

Molecular Dynamics ◽

Ion Channel ◽

Annual Meeting ◽

Simulation Study ◽

Mechanical Force ◽

Dynamics Simulation ◽

Coarse Grained ◽

Biophysical Society ◽

Mechanosensitive Ion Channel

3G1446 Molecular dynamics simulation of outer mitochondrial membrane protein Tom20-presequence complex(3G Protein: Structure 4,The 49th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.51.s131_6 ◽

2011 ◽

Vol 51 (supplement) ◽

pp. S131-S132

Author(s):

Yasuaki Komuro ◽

Takaharu Mori ◽

Eiro Muneyuki ◽

Takashi Saitoh ◽

Daisuke Kohda ◽

...

Keyword(s):

Molecular Dynamics ◽

Protein Structure ◽

Membrane Protein ◽

Annual Meeting ◽

Mitochondrial Membrane ◽

Dynamics Simulation ◽

Outer Mitochondrial Membrane ◽

Biophysical Society ◽

Mitochondrial Membrane Protein

3G1358 Flexible docking between antigen and antibody by multicanonical molecular dynamics simulation(3G Protein: Structure 4,The 49th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.51.s131_3 ◽

2011 ◽

Vol 51 (supplement) ◽

pp. S131

Author(s):

Narutoshi Kamiya ◽

Junichi Higo ◽

Haruki Nakamura

Keyword(s):

Molecular Dynamics ◽

Protein Structure ◽

Annual Meeting ◽

Dynamics Simulation ◽

Flexible Docking ◽

2P051 Quantifying how actin filament is stretched, twisted and bent : A coarse grained molecular dynamics simulation study(01C. Protein: Property,Poster,The 52nd Annual Meeting of the Biophysical Society of Japan(BSJ2014))

Seibutsu Butsuri ◽

10.2142/biophys.54.s203_3 ◽

2014 ◽

Vol 54 (supplement1-2) ◽

pp. S203

Author(s):

Shinji Matsushita ◽

Shoji Takada

Keyword(s):

Molecular Dynamics ◽

Annual Meeting ◽

Actin Filament ◽

Simulation Study ◽

Dynamics Simulation ◽

Coarse Grained ◽

Protein Property ◽

Biophysical Society ◽

Coarse Grained Molecular Dynamics