Drying is crucial in the quality preservation of food materials. Physics-based models are effective tools to optimally control the drying process. However, these models require accurate thermo-physical properties; unavailability or uncertainty in the values of these properties increases the possibility of error. Property estimation methods are not standardized, and usually involve the use of many instruments and are time-consuming. In this work, we have developed an experimentally validated deep learning-based artificial neural network model that estimates sensitive input parameters of food materials using temperature and moisture data from a set of simple experiments. This model predicts input parameters with error less than 1%. Further, using input parameters, physics-based model predicts temperature and moisture to within 5% accuracy of experiments. The proposed work when interfaced with food machinery could play a significant role in process optimization in food processing industries.