Molecular phylogeny and morphology of the marine diatom Talaroneis posidoniae gen. et sp. nov. (Bacillariophyta) advocate the return of the Plagiogrammaceae to the pennate diatoms

Phycologia ◽  
2004 ◽  
Vol 43 (1) ◽  
pp. 58-67 ◽  
Author(s):  
Wiebe H. C. F. Kooistra ◽  
Gandi Forlani ◽  
Frithjof A. S. Sterrenburg ◽  
Mario De Stefano
Keyword(s):  
Molecular Phylogeny ◽  
Marine Diatom ◽  
Pennate Diatoms

scholarly journals Morphology and molecular phylogeny of the marine diatom Nitzschia dentatum sp. nov. and N. johorensis sp. nov. (Bacillariophyceae) from Malaysia

2017 ◽  
Vol 24 (2) ◽  
pp. 183-196 ◽  
Author(s):  
S.N.P. Suriyanti ◽  
G. Usup
Keyword(s):  
Molecular Phylogeny ◽  
Dna Sequences ◽  
Ribosomal Subunit ◽  
Marine Diatom ◽  
Beach Sand ◽  
Diagnostic Feature ◽  
Morphological Identification ◽  
Diagnostic Features ◽  
Plant Taxon ◽  
Seawater Samples

The marine diatom Nitzschia dentatum sp. nov. isolated from seawater samples of Kudat and N. johorensis sp. nov. isolated from beach sand samples of Sibu Island, Malaysia, have been described in this paper. Morphological identification, molecular phylogeny and toxin analyses were executed on the pure non-axenic algal cultures designated as KD89 and PS8, respectively. The main distinguishing feature of N. dentatum sp. nov. compared to other species is the jaggedcingulum structure which is only unique to this species. Meanwhile, N. johorensis sp. nov.is strongly characterized by the ‘hantzschioid’and ‘nitzschioid’ symmetry dimorphisms; a common diagnostic feature but rarely described in other Nitzschia species. Identification of both strains was made based on the frustule diagnostic features and verified using the partial large ribosomal subunit DNA sequences. The results have confirmed that these two speciesare independent entities and novel species that have not been documented elsewhere. A notable finding from the Maximum Likelihood (ML), Maximum Parsimony (MP) and Bayesian Index (BI) analyses have also revealed that Nitzschia species that have indentation in the middle of valves have been consistently grouped as same clade with high bootstrap values. The extracts of both species did not show detectable amount of domoicacid and have therefore, been classified as non-toxic. This discovery contributes to the documentation of Nitzschia species worldwide.Bangladesh J. Plant Taxon. 24(2): 183–196. 

Molecular phylogeny and taxonomic evaluation of the genus Asaccus Dixon and Anderson, 1973 (Reptilia: Phyllodactylidae) in Iran

2020 ◽  
pp. 207-214
Author(s):  
Akbar Fattahi
Keyword(s):  
Molecular Phylogeny ◽  
Nuclear Gene ◽  
Genetic Distances ◽  
Genetic Lineage ◽  
New Taxon ◽  
Zagros Mountains ◽  
Relict Species ◽  
Taxonomical Revision ◽  
Two Populations ◽  
Taxonomic Evaluation

The Iranian species of the phyllodactylid geckos of the genus Asaccus are found only in the valleys of the Zagros Mountains, a region which represents an important area of endemism in western Iran. Recently, many relict species have been described from the central and southern parts of the Zagros Mountains, which were previously known as A. elisae. The recent descriptions of species within this complex suggest that diversity within the genus may be higher than expected and that its taxonomy and systematics should be revised. In the present study, phylogenetic relationships within the genus Asaccus were evaluated using two mitochondrial and one nuclear gene. Genetically, the genus shows high levels of variability. The molecular phylogeny of the genus suggests the presence of three main clades along the Zagros Mountains with the southern population (from the Hormozgan province) and one clade (A. sp8 and A. sp9) being sister taxon to A. montanus from UAE. The remaining samples are separated into two reciprocally monophyletic groups: the northern (Kurdistan, Kermanshah and Ilam provinces) and the central (Lorestan, Khuzestan, Kohgilouye-Bouyer Ahmad and Fars provinces) Zagros groups. The results of the present study suggest that populations attributed to A. elisae in Iran correspond to distinct lineages with high genetic distances. In brief, our results suggest that the genus needs a major taxonomical revision The Arabian origin of the genus has not been confirmed, because two populations from Zagros were located within the A. montanus, A. gallagheri and A. platyrhynchus clade. Further morphological analyses are needed to systematically define each genetic lineage as a new taxon.

TRIGLYCERIDE COMPOSITION OF SIXTEEN STRAINS OF MARINE DIATOM

2013 ◽  
Vol 5 (1) ◽  
Author(s):  
Lily M.G. Panggabean ◽  
Abdullah Rasyid ◽  
Zarrah Duniani ◽  
Yana Meliana ◽  
Indah Kurniasih
Keyword(s):  
Mass Spectrometry ◽  
Fatty Acid ◽  
Double Bond ◽  
Unsaturated Fatty Acid ◽  
Ion Trap ◽  
Carbon Chain ◽  
Highly Unsaturated Fatty Acid ◽  
Marine Diatom ◽  
Ion Trap Mass Spectrometry ◽  
Spectra Analysis

Trigliceride or triacylglicerol (TAG) composition in crude oil of sixteen strain of marine diatom has been detected by spectra analyses on an Electrospray - Ion Trap – Mass Spectrometry (ESI-IT-MS) HCT Bruker-Daltonic GmbH instrument with AgNO3 used as coordination ionization agent. Biomass samples of each microalga strain were taken from early and late stationary cultures in f/2 enriched seawater and algal oils were extracted according to Bligh and Dyer. Results from spectra analysis showed that P-Pt-P (C16:0-C16:1-C16:0) were distinguished in TAG from diatom strains Chaetoceros sp.1, Chaetoceros sp.2, Thalasiossira sp.1, Thalasiossira sp.2, Thalasiossira sp.3, Navicula sp. 1, Navicula sp. 2, Navicula sp. 3, Navicula sp. 4, Nitzschia sp. 2 and Amphora sp. In contrast, TAGs in Melosira sp. included P-P-P (C16:0-C16:0-C16:0) and P-P-O (C16:0-C16:0-C18:1) were identified. TAGs from Chaetoceros sp. were the most varies among samples, i.e. P-Pt-P (C16:0-C16:1-C16:0), A-P-M (C20:4-C16:0-C14:0), P-Pt-Lt (C16:0-C16:1-C18:3), P-Pt-A (C16:0-C16:1-C20:4), D-P-P (C22:6-C16:0-C16:0), A-Ln-P (C20:4-C18:2-C16:0). Various TAGs were also detected in Nitzschia sp.2, i.e. P-Pt-M (C16:0-C16:1-C14:0), P-Pt-P (C16:0-C16:1-C16:0), P-Pt-S (C16:0-C16:1-C18:0), P-Pt-A (C16:0-C16:1-C20:4). TAGs composition in Skeletonema strains that similar to those in Nitzschia sp.1 has longer carbon, i.e. P-P-O (C16:0-C16:0-C18:1), P-O-O (C16:0-C18:1-C18:1) and O-O-O (C18:1-C18:1-C18:1). TAGs with longer carbon chain and more double bond including highly unsaturated fatty acid C20:4 were increased with culture age in diatoms Chaetoceros sp.1, Chaetoceros sp.2, Thalasiossira sp.2, Navicula sp.1 and Nitzschia sp. 2.Keywords: diatom, TAG, ESI-IT-MS, f/2, early and late stationary

Morphology, nomenclature and distribution of Bassia monticola (Chenopodiaceae-Amaranthaceae), a poorly known species from Western Asia

2020 ◽  
pp. 13-17
Author(s):  
A. P. Sukhorukov ◽  
M. A. Kushunina
Keyword(s):  
Molecular Phylogeny ◽  
Morphological Characters ◽  
Mountainous Regions ◽  
Western Asia

Kochia monticola was previously considered as a synonym for the widely distributed Irano-Turanian Panderia pilosa. After the merger of Kochia and Panderia with Bassia based on molecular phylogeny, K. monticola remained a synonym of Bassia pilosa. We claim that Bassia monticola, a name proposed by Kuntze (1891) for K. monticola, should be separated from B. pilosa based on morphological characters and localised distribution in mountainous regions of Iran, Iraq, Syria, and Lebanon at altitudes 1800–2600 m a. s. l.

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