scholarly journals Genomic sequence of yellow fever virus from a Dutch traveller returning from the Gambia-Senegal region, the Netherlands, November 2018

2019 ◽  
Vol 24 (4) ◽  
Author(s):  
My VT Phan ◽  
Sarwa Darwish Murad ◽  
Annemiek A van der Eijk ◽  
Herold J. Metselaar ◽  
Hermien Hartog ◽  
...  
Keyword(s):  
The Netherlands ◽  
Yellow Fever ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Yellow Fever Virus ◽  
Genomic Sequence ◽  
Public Awareness ◽  
The Gambia ◽  
Fever Virus

In November 2018, yellow fever was diagnosed in a Dutch traveller returning from a bicycle tour in the Gambia-Senegal region. A complete genome sequence of yellow fever virus (YFV) from the case was generated and clustered phylogenetically with YFV from the Gambia and Senegal, ruling out importation into the Netherlands from recent outbreaks in Brazil or Angola. We emphasise the need for increased public awareness of YFV vaccination before travelling to endemic countries.

scholarly journals Complete Genome Sequence of Rift Valley Fever Virus Strain Lunyo

2016 ◽  
Vol 4 (2) ◽  
Author(s):  
Sarah Lumley ◽  
Daniel L. Horton ◽  
Denise A. Marston ◽  
Nicholas Johnson ◽  
Richard J. Ellis ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Virus Strain ◽  
Complete Genome Sequence ◽  
Rift Valley ◽  
Complete Genome ◽  
Rift Valley Fever ◽  
Genomic Sequence ◽  
Rift Valley Fever Virus ◽  
Fever Virus ◽  
Valley Fever

Using next-generation sequencing technologies, the first complete genome sequence of Rift Valley fever virus strain Lunyo is reported here. Originally reported as an attenuated antigenic variant strain from Uganda, genomic sequence analysis shows that Lunyo clusters together with other Ugandan isolates.

scholarly journals Complete Genome Sequence of a Vampire Bat Rabies Virus from French Guiana

2016 ◽  
Vol 4 (2) ◽  
Author(s):  
Anne Lavergne ◽  
Edith Darcissac ◽  
Hervé Bourhy ◽  
Sourakhata Tirera ◽  
Benoît de Thoisy ◽  
...  
Keyword(s):  
Rabies Virus ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
French Guiana ◽  
Genomic Sequence ◽  
Amazon Region ◽  
Desmodus Rotundus ◽  
Bat Rabies ◽  
Vampire Bat

A rabies virus was detected in a common vampire bat ( Desmodus rotundus ) in French Guiana. Its genomic sequence was obtained and found to be closely related to other hematophagous bat-related viruses that widely circulate in the northern Amazon region. This virus is named AT6.

scholarly journals Complete Genome Sequence of a Field Isolate of Classical Swine Fever Virus Belonging to Subgenotype 2.2 from India

2018 ◽  
Vol 6 (24) ◽  
Author(s):  
Neelam Tomar ◽  
Veena Sharma ◽  
Jeny K. John ◽  
Menaka Sethi ◽  
Pradeep K. Ray ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Classical Swine Fever Virus ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Field Isolate ◽  
Classical Swine Fever ◽  
Fever Virus ◽  
T Cell Epitopes ◽  
Glycosylation Sites ◽  
Group 2

ABSTRACT The complete genome sequence of classical swine fever virus (CSFV) strain CSFV-UP-BR-KHG-06, from genotype 2.2, was determined. Comparative analysis based on the amino acid sequence of some important B-cell epitopes, T-cell epitopes, glycosylation sites, and conformational residues showed the striking differences between the group 2 virus KHG-06 and the vaccine strains HCLV/India and C-strain.

scholarly journals Complete Genome Sequence of a Classical Swine Fever Virus Isolate Belonging to New Subgenotype 2.1d from Henan Province, Central China

2016 ◽  
Vol 4 (3) ◽  
Author(s):  
Chaochao Lv ◽  
Qingyuan Yang ◽  
Xiaojing Gao ◽  
Yali Yao ◽  
Xiangdong Li ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Classical Swine Fever Virus ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Virus Isolate ◽  
Field Isolate ◽  
Classical Swine Fever ◽  
Glycosylation Site ◽  
Fever Virus ◽  
Central China

We report here the complete genome sequence of HeN1505, a field isolate of classical swine fever virus belonging to the new subgenotype 2.1d. HeN1505 distinguishes itself from other classical swine fever virus (CSFVs) by 1 amino acid substitution in position 159 (threonine by isoleucine), which led to the loss of one N -glycosylation site in the N pro protein.

scholarly journals The complete genome sequence of a Crimean-Congo Hemorrhagic Fever virus isolated from an endemic region in Kosovo

2008 ◽  
Vol 5 (1) ◽  
pp. 7 ◽  
Author(s):  
Darja Duh ◽  
Stuart T Nichol ◽  
Marina L Khristova ◽  
Ana Saksida ◽  
Iva Hafner-Bratkovič ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Hemorrhagic Fever ◽  
Fever Virus ◽  
Endemic Region ◽  
Crimean Congo Hemorrhagic Fever ◽  
Hemorrhagic Fever Virus

scholarly journals Complete Genome Sequence of Classical Swine Fever Virus Subgenogroup 2.1 from Assam, India

2015 ◽  
Vol 3 (1) ◽  
Author(s):  
Anuj Ahuja ◽  
Uttaran Bhattacharjee ◽  
Amit Kumar Chakraborty ◽  
Amarjit Karam ◽  
Sandeep Ghatak ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Classical Swine Fever Virus ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Classical Swine Fever ◽  
Fever Virus

scholarly journals Complete Genome Sequence of Potato Virus T from Bolivia, Obtained from a 33-Year-Old Sample

2018 ◽  
Vol 7 (18) ◽  
Author(s):  
Ian P. Adams ◽  
Jorge Abad ◽  
Cesar E. Fribourg ◽  
Neil Boonham ◽  
Roger A. C. Jones
Keyword(s):  
Genome Sequence ◽  
Potato Virus ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Genomic Sequence ◽  
Complete Genomic Sequence ◽  
Potato Sample ◽  
Type Isolate ◽  
Andean Potato ◽  
Complete Genomic

We present the complete genomic sequence of a Potato virus T (PVT) isolate originally obtained from a Bolivian potato sample collected in 1976, and we compare it with the genome of the PVT type isolate from Peru. There is an 81% nucleotide identity between the two genomes of this Andean potato virus.

scholarly journals Complete Genome Sequence of a Sub-Subgenotype 2.1i Isolate of Classical Swine Fever Virus from China

2017 ◽  
Vol 5 (14) ◽  
Author(s):  
Bikai Zhang ◽  
Shijiang Mi ◽  
Fei Bao ◽  
Huancheng Guo ◽  
Changchun Tu ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Classical Swine Fever Virus ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Classical Swine Fever ◽  
Fever Virus ◽  
Nontranslated Region

ABSTRACT The complete genome sequence of a sub-subgenotype 2.1i isolate of classical swine fever virus (CSFV), GD317/2011, was determined. Notably, GD317/2011 is distant from the sub-subgenotype 2.1b isolate HEBZ at genes of Erns, E1, E2, P7, NS2, NS5A and the 3′-nontranslated region (3′-NTR) but is closely related to that at genes of Npro, Core, NS3, NS4A, NS4B, and NS5B.

scholarly journals Shedding of Yellow Fever Virus From an Imported Case in the Netherlands After Travel to Brazil

2020 ◽  
Vol 7 (2) ◽  
Author(s):  
My V T Phan ◽  
Mariana Mendonca Melo ◽  
Els van Nood ◽  
Georgina Aron ◽  
Jolanda J C Kreeft-Voermans ◽  
...  
Keyword(s):  
The Netherlands ◽  
Yellow Fever ◽  
Yellow Fever Virus ◽  
Virus Genome ◽  
Fever Virus ◽  
Urine Samples ◽  
Genome Sequences ◽  
Imported Case ◽  
Serum And Urine ◽  
Serum And Urine Samples

Abstract We report yellow fever infection in a Dutch traveler returning from Brazil. Yellow fever virus (YFV) was identified in serum and urine samples over a period of 1 month. Yellow fever virus genome sequences from the patient clustered with recent Brazilian YFV and showed with limited nucleotide changes during the resolving infection.

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