Development of a method for identification and genotyping of Pasteurella multocida and Mannheimia haemolytica bacteria using polymerase chain reaction and phylogenetic analysis of bacterial cultures isolated from cattle

2016 ◽  
Vol 31 (2) ◽  
pp. 75-81 ◽  
Author(s):  
A. V. Nefedchenko ◽  
A. N. Shikov ◽  
A. G. Glotov ◽  
T. I. Glotova ◽  
V. A. Ternovoy ◽  
...  
2019 ◽  
Vol 35 (3) ◽  
pp. 220-223
Author(s):  
Jo Kizu ◽  
Christina Neuman ◽  
Luke Le Grand ◽  
Wenjun Liu

ABSTRACT An arbovirus surveillance military exercise was conducted to assess the risk of Ross River virus (RRV) and Barmah Forest virus (BFV) in the Australian Defence Force (ADF) Wide Bay training area (WBTA), northeastern Australia, in April 2018. Of the 5,540 female mosquitoes collected, 3,702 were screened for RRV and BFV by quantitative reverse transcription–polymerase chain reaction in a field laboratory. One pool of Verrallina funerea was positive for RRV and 8 pools (7 pools of Aedes vigilax and 1 pool of Culex annulirostris) were positive for BFV. Phylogenetic analysis of the complete nucleotide sequence of the E2 protein subgrouped both RRV and BFV with viruses previously isolated from human infections, indicating the potential risk of RRV and BFV infection to ADF personnel while training in WBTA. This is the 1st time that both RRV and BFV have been detected in a military training area.


2014 ◽  
Vol 38 (1) ◽  
pp. 99-106
Author(s):  
Ihab G. M. AL-Shemmari

The aim of this study was to identify pasteurella multocida and their types by PCR in cattle’s and buffaloesi bagdad from March to August 2012 on 204 animals , including 102 cattle and 102 buffaloes at slaughter houses from Baghdad .Blood samples and nasal swaps were collected , before slaughtering and lung tissues of slaughtered animal , and from 54 clinically suspected cases of pasteurellosis , including 27 bovines ,and 27 buffaloes the samples taken included blood and nasal swabs . Pasteurellamultocida were isolated from 94 animals include 49 cattle 45 buffaloes. The typing of the isolates by multiplex PCR for genotyping Pasteuerllamultocida revealed 93 isolates of type B , 31 from cattle and 62 from buffaloes ,and 81 isolates of type A , 55 from cattle and 26 from buffaloes .


2019 ◽  
Vol 12 (11) ◽  
pp. 1769-1774 ◽  
Author(s):  
Jothimani Pradeep ◽  
Selvaraj Stephen ◽  
Balakrishnan Sangeetha ◽  
Prabakar Xavier Antony ◽  
S. Amsaveni ◽  
...  

Background and Aim: Diagnosis of query fever (QF) is mostly done on the basis of serological/molecular tests, due to the stringent requirement of biosafety level-3 containment facilities for isolating Coxiella burnetii in culture. QF is an important zoonosis and is considered to be an occupational hazard to livestock handlers. This report describes our study on the serological as well as molecular evidence of QF in animal handlers from Puducherry and surrounding Tamil Nadu, from where, to the best of our knowledge, no such reports are available so far. Materials and Methods: Seventy-five animal handlers were recruited, comprising veterinarians, slaughterhouse workers, butchers, and animal attendants of various government veterinary clinics from Puducherry and surrounding areas of Tamil Nadu state. QF serology was performed to identify Phase I and Phase II immunoglobulin G antibodies to C. burnetii. Nested polymerase chain reaction (N-PCR) was carried out to detect C. burnetii DNA in buffy coat samples by targeting IS1111 gene element. N-PCR-positive samples were sequenced and phylogenetic analysis was performed using MEGA software version 10.0. Results: A total of 21 animal handlers (28.1%) were positive for either serology or PCR. PCR alone was positive in 10 (13.4%), only serology was positive in 8 (10.7%), and both serology and PCR were positive in three samples (4.0%). GenBank accession numbers were obtained for 13 N-PCR-positive samples (MG548608-MG548620). Six of our study sequences showed close similarity with the reference isolates from Bengaluru, Colombia, Brazil, France, and Iran. Conclusion: A significant percentage of QF positivity in animal handlers of this part of South India, Puducherry, warrants a prospective study with follow-up of a large number of this occupational group.


2021 ◽  
Vol 52 (1) ◽  
pp. 136-145
Author(s):  
Al-Abedi & Al-Amery

The aim of current study is to detect Babesia bovis, B. bigemina, and B. divergens in ticks using molecular polymerase chain reaction (PCR) assay. In a totally 180 cattle examined to collect of tick samples during December 2018 to August 2019, the findings were revealed on 63 (35%) cattle infested with ticks that classified morphologically to belong to the genus of Hyalomma and genus of Rhipicephalus. From 50 tick samples tested by PCR assay, 41 (82%) were infested by Babesia genus including 30 (68.18%) infested with B. bovis and 11 (31.82%) infested with B. bigemina; whereas, no tick samples were found to be infested with B. divergens. To document the local isolated strains, five PCR products of each B. bovis and B. bigemina positive strains were selected, sequenced and reported in the NCBI under the accession numbers of (MN727083.1, MN727084.1, MN727085.1, MN727086.1, and MN727087.1) and (MN741113.1, MN741114.1, MN741115.1,MN741116.1, and MN741117.1) respectively.


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