scholarly journals EviAtlas: a tool for visualising evidence synthesis databases

2019 ◽  
Author(s):  
Neal Robert Haddaway ◽  
Andrew Feierman ◽  
Matthew Grainger ◽  
Charles T. Gray ◽  
Ezgi Tanriver Ayder ◽  
...  

Systematic mapping assesses the nature of an evidence base, answering how much evidence exists on a particular topic. Perhaps the most useful outputs of a systematic map are an interactive database of studies and their meta-data, along with visualisations of this database. Despite the rapid increase in systematic mapping as an evidence synthesis method, there is currently a lack of Open Source software for producing interactive visualisations of systematic map databases. In April 2018, as attendees at and coordinators of the first ever Evidence Synthesis Hackathon in Stockholm, we decided to address this issue by developing an R-based tool called EviAtlas, an Open Access (i.e. free to use) and Open Source (i.e. software code is freely accessible and reproducible) tool for producing interactive, attractive tables and figures that summarise the evidence base. Here, we present our tool which includes the ability to generate vital visualisations for systematic maps and reviews as follows: a complete data table; a spatially explicit geographical information system (Evidence Atlas); Heat Maps that cross-tabulate two or more variables and display the number of studies belonging to multiple categories; and standard descriptive plots showing the nature of the evidence base, for example the number of studies published per year or number of studies per country. We believe that EviAtlas will provide a stimulus for the development of other exciting tools to facilitate evidence synthesis.

2020 ◽  
Vol 9 (1) ◽  
Author(s):  
Solveig L. Johannesdottir ◽  
Biljana Macura ◽  
Jennifer McConville ◽  
Dag Lorick ◽  
Neal R. Haddaway ◽  
...  

Abstract Background Eutrophication of the Baltic Sea, and many other water bodies, is partly the result of point-source emissions of nutrients and carbon from wastewater. At the same time, nitrogen and phosphorus planetary boundaries have been breached. There is a need for more efficient resource management, including the recovery and reuse of nutrients and carbon in waste. The aim of this paper is to collate evidence on ecotechnologies intended for use in the wastewater sector globally to facilitate the recovery or reuse of carbon and/or nutrients. Methods Searches were performed on literature published between 2013 and 2017 and in 5 bibliographic databases, 1 search engine, and 38 specialist websites. Database searches were performed in English. Searches in specialist websites were also performed in Finnish, Polish and Swedish. There was no geographical limitation. Screening was conducted at title and abstract level, and on full texts. Apart from bibliographical information, we extracted information on ecotechnology type, intervention, details of the recovery or reuse, the type of wastewater stream to which the ecotechnology is applied, the study location, type and design. Prior to screening and coding, we conducted consistency checks amongst reviewers. We generated a searchable database of coded studies. Findings were synthesised narratively and visualised in a geographical information system (i.e. an evidence atlas). We identified a series of knowledge gaps and clusters that warrant further research. Results The search resulted in 4024 records, out of which 413 articles were retained after the screening process. In addition, 35 pre-screened studies from the specialist website searches were added. Together, these 448 articles contained 474 individual studies of 28 types of ecotechnologies. A combination of ecotechnologies (16.7%), followed by microalgae cultivation (14.1%) were the most frequent ecotechnologies in the evidence base. Ecotechnologies for recovery composed 72.6% of the evidence base. The most common wastewater streams for recovery were mixed wastewater and sludge (73.8%). There was a relative lack of studies on recovery from source-separated wastewater. The most common type of recovery was energy (27.3%), followed by simultaneous recovery of nitrogen and phosphorus (22.1%). Reuse of recovered substances was described in 22.8% of the studies. The most common type of reuse was of nitrogen and phosphorus (57.4%), followed by joint reuse of organic carbon, nitrogen and phosphorus (35.2%). Reuse ecotechnologies were mostly focused on the use of wastewater for irrigation or reuse of biosolids, and not on the nutrients that had been extracted through e.g. precipitation of struvite. In 22 studies both recovery and reuse were described. In total, 60 different study countries were reported in the evidence base, and the most common study location was China. Conclusions We found substantial evidence for the recovery and reuse of nutrients and carbon from wastewater sources. The relative abundance of studies where substances are recovered compared to studies where they are reused, suggests a knowledge gap on reuse of recovered nutrients and carbon. The majority of studies on reuse were on irrigation with treated wastewater or reuse of biosolids, and not on reuse of extracted nutrients such as struvite.


Author(s):  
Stefano De Paoli ◽  
Maurizio Teli ◽  
Vincenzo D'Andrea

How do licenses participate in Free and Open Source Software (FLOSS) community life? This paper aims at answering this question. Despite the dynamic character of FLOSS development, the sociological debate has taken for granted a static perspective of communities organized around a restricted range of social values and rules. Criticizing the main sociological approaches to FLOSS community, we assert, on the contrary, that the FLOSS free/open character shall not be assumed a priori to explain the coordination efforts in communities. Focusing on the role of software licenses in everyday FLOSS communities activities, considered as boundary objects, we observe that controversies and conflicts around licenses are fundamental parts of communities life. Basing our researches on two different projects, the Geographical Information System GRASS and the OpenSolaris™ Operating System, we show how the construction of the FLOSS free/open character takes place inside the debates about licenses.


2021 ◽  
Vol 14 (3) ◽  
pp. 58-69
Author(s):  
Madanjit Singh ◽  
Munish Saini ◽  
Manevpreet Kaur

This paper has statically investigated the source code of open source software (OSS) projects to uncover the presence of vulnerabilities in the code. The conducted research emphasizes that the presence of vulnerabilities has adverse effects on the overall software quality. The authors found the increasing trends in the vulnerabilities as the lines of code (LOC) increases during the software evolution. This signifies the fact that the addition of new features or change requests into the OSS project may cause an increase in vulnerability. Further, the relation between software vulnerabilities and popularity is also examined. This research does not find the existence of any relationship among software vulnerabilities and popularity. This research will provide significant implications to the developers and project managers to better understand the present state of the software.


2021 ◽  
Vol 13 (10) ◽  
pp. 1869
Author(s):  
Pietro Mattivi ◽  
Salvatore Eugenio Pappalardo ◽  
Nebojša Nikolić ◽  
Luca Mandolesi ◽  
Antonio Persichetti ◽  
...  

Weed management is a crucial issue in agriculture, resulting in environmental in-field and off-field impacts. Within Agriculture 4.0, adoption of UASs combined with spatially explicit approaches may drastically reduce doses of herbicides, increasing sustainability in weed management. However, Agriculture 4.0 technologies are barely adopted in small-medium size farms. Recently, small and low-cost UASs, together with open-source software packages, may represent a low-cost spatially explicit system to map weed distribution in crop fields. The general aim is to map weed distribution by a low-cost UASs and a replicable workflow, completely based on open GIS software and algorithms: OpenDroneMap, QGIS, SAGA and OpenCV classification algorithms. Specific objectives are: (i) testing a low-cost UAS for weed mapping; (ii) assessing open-source packages for semi-automatic weed classification; (iii) performing a sustainable management scenario by prescription maps. Results showed high performances along the whole process: in orthomosaic generation at very high spatial resolution (0.01 m/pixel), in testing weed detection (Matthews Correlation Coefficient: 0.67–0.74), and in the production of prescription maps, reducing herbicide treatment to only 3.47% of the entire field. This study reveals the feasibility of low-cost UASs combined with open-source software, enabling a spatially explicit approach for weed management in small-medium size farmlands.


2014 ◽  
Vol 9 (4) ◽  
pp. 445-449
Author(s):  
N. Zlatanović ◽  
M. Stefanović ◽  
M. Milojević ◽  
J. Čotrić

Drainage basins are for the most part ungauged or poorly gauged not only in Serbia but in most parts of the world, usually due to insufficient funds, but also the decommission of river gauges in upland catchments to focus on downstream areas which are more populated. Design discharges are needed for these rivers where no streamflow data are available, for various applications. Examples include river training works for flood protection measures or erosion control, design of culverts, water supply facilities, small hydropower plants, etc. This study deals with the application of freely available and open source software and datasets for automating rainfall–runoff analysis of ungauged basins, applying geographical information systems techniques and programming to methodologies currently in use in hydrological practice. The geomorphometric module was tested on more than 100 catchments throughout Serbia (using a digital terrain model) and compared to manually calculated values (using topographic maps). The discharge estimation module was tested on 21 catchments where data were available and compared to results obtained by frequency analysis of measured discharges. The geomorphometric module of the calculation system showed excellent results, saving a great deal of time that would otherwise have been spent on manual processing of geospatial data, while the discharge estimation module showed a need for improved hydrological models.


2017 ◽  
Vol 16 (3) ◽  
pp. 243-267
Author(s):  
Neil Gandal ◽  
Peter Naftaliev ◽  
Uriel Stettner

Abstract Knowledge spillovers in Open Source Software (OSS) can occur via two channels: In the first channel, programmers take knowledge and experience gained from one OSS project they work on and employ it in another OSS project they work on. In the second channel, programmers reuse software code by taking code from an OSS project and employing it in another. We develop a methodology to measure software reuse in a large OSS network at the micro level and show that projects that reuse code from other projects have higher success. We also demonstrate knowledge spillovers from projects connected via common programmers.


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