Thio Derivatives of 2(5H)-Furanone As Inhibitors against Bacillus subtilis Biofilms

Gram-positive bacteria cause a wide spectrum of infectious diseases, including nosocomial infections. While in the biofilm, bacteria exhibit increased resistance to antibiotics and the human immune system, causing difficulties in treatment. Thus, the development of biofilm formation inhibitors is a great challenge in pharmacology. The gram-positive bacterium Bacillus subtilis is widely used as a model organism for studying biofilm formation. Here, we report on the effect of new synthesized 2(5Н)-furanones on the biofilm formation by B.subtilis cells. Among 57 compounds tested, sulfur-containing derivatives of 2(5H)-furanone (F12, F15, and F94) repressed biofilm formation at a concentration of 10 g/ml. Derivatives F12 and F94 were found to inhibit the biosynthesis of GFP from the promoter of the eps operon encoding genes of the biofilm exopolysaccharide synthesis (EPS). Using the differential fluorescence staining of alive/dead cells, we demonstrated an increased bacterial sensitivity to antibiotics (kanamycin and chloramphenicol) in the presence of F12, F15, and F94, with F12 being the most efficient one. The derivative F15 was capable of disrupting an already formed biofilm and thereby increasing the efficiency of antibiotics.

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Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilis

Nature Communications ◽

10.1038/s41467-019-13408-7 ◽

2019 ◽

Vol 10 (1) ◽

Cited By ~ 5

Author(s):

Naomi Shimokawa-Chiba ◽

Claudia Müller ◽

Keigo Fujiwara ◽

Bertrand Beckert ◽

Koreaki Ito ◽

...

Keyword(s):

Bacillus Subtilis ◽

Stop Codon ◽

Release Factor ◽

Positive Bacterium ◽

Gram Positive ◽

E Coli ◽

Cryo Electron Microscopy ◽

Dead End ◽

Bacterium Bacillus Subtilis ◽

Bacterium Bacillus

AbstractRescue of the ribosomes from dead-end translation complexes, such as those on truncated (non-stop) mRNA, is essential for the cell. Whereas bacteria use trans-translation for ribosome rescue, some Gram-negative species possess alternative and release factor (RF)-dependent rescue factors, which enable an RF to catalyze stop-codon-independent polypeptide release. We now discover that the Gram-positive Bacillus subtilis has an evolutionarily distinct ribosome rescue factor named BrfA. Genetic analysis shows that B. subtilis requires the function of either trans-translation or BrfA for growth, even in the absence of proteotoxic stresses. Biochemical and cryo-electron microscopy (cryo-EM) characterization demonstrates that BrfA binds to non-stop stalled ribosomes, recruits homologous RF2, but not RF1, and induces its transition into an open active conformation. Although BrfA is distinct from E. coli ArfA, they use convergent strategies in terms of mode of action and expression regulation, indicating that many bacteria may have evolved as yet unidentified ribosome rescue systems.

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Inducible Transport of Citrate in a Gram-positive Bacterium, Bacillus subtilis

Journal of Biological Chemistry ◽

10.1016/s0021-9258(18)62427-5 ◽

1971 ◽

Vol 246 (4) ◽

pp. 1032-1040

Author(s):

Klaus Willecke ◽

Arthur B. Pardee

Keyword(s):

Bacillus Subtilis ◽

Positive Bacterium ◽

Gram Positive ◽

Bacterium Bacillus Subtilis ◽

Bacterium Bacillus

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ResQ, a release factor-dependent ribosome rescue factor in the Gram-positive bacterium Bacillus subtilis

10.1101/732420 ◽

2019 ◽

Author(s):

Naomi Shimokawa-Chiba ◽

Claudia Müller ◽

Keigo Fujiwara ◽

Bertrand Beckert ◽

Koreaki Ito ◽

...

Keyword(s):

Bacillus Subtilis ◽

Stop Codon ◽

Release Factor ◽

Active Conformation ◽

Positive Bacterium ◽

Gram Positive ◽

E Coli ◽

Dead End ◽

Bacterium Bacillus Subtilis ◽

Bacterium Bacillus

SummaryRescue of the ribosomes from dead-end translation complexes, such as those on truncated (non-stop) mRNA, is essential for the cell. Whereas bacteria use trans-translation for ribosome rescue, some Gram-negative species possess alternative and release factor (RF)-dependent rescue factors, which enable an RF to catalyze stop codon-independent polypeptide release. We now discover that the Gram-positive Bacillus subtilis has an evolutionarily distinct ribosome rescue factor named ResQ. Genetic analysis shows that B. subtilis requires the function of either trans-translation or ResQ for growth, even in the absence of proteotoxic stresses. Biochemical and cryo-EM characterization demonstrates that ResQ binds to non-stop stalled ribosomes, recruits homologous RF2, but not RF1, and induces its transition into an open active conformation. Although ResQ is distinct from E. coli ArfA, they use convergent strategies in terms of mode of action and expression regulation, indicating that many bacteria may have evolved as yet unidentified ribosome rescue systems.

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