scholarly journals High-Throughput Identification and Analysis of Novel Conotoxins from Three Vermivorous Cone Snails by Transcriptome Sequencing

Marine Drugs ◽  
2019 ◽  
Vol 17 (3) ◽  
pp. 193 ◽  
Author(s):  
Ge Yao ◽  
Chao Peng ◽  
Yabing Zhu ◽  
Chongxu Fan ◽  
Hui Jiang ◽  
...  

The venom of each Conus species consists of a diverse array of neurophysiologically active peptides, which are mostly unique to the examined species. In this study, we performed high-throughput transcriptome sequencing to extract and analyze putative conotoxin transcripts from the venom ducts of 3 vermivorous cone snails (C. caracteristicus, C. generalis, and C. quercinus), which are resident in offshore waters of the South China Sea. In total, 118, 61, and 48 putative conotoxins (across 22 superfamilies) were identified from the 3 Conus species, respectively; most of them are novel, and some possess new cysteine patterns. Interestingly, a series of 45 unassigned conotoxins presented with a new framework of C-C-C-C-C-C, and their mature regions were sufficiently distinct from any other known conotoxins, most likely representing a new superfamily. O- and M-superfamily conotoxins were the most abundant in transcript number and transcription level, suggesting their critical roles in the venom functions of these vermivorous cone snails. In addition, we identified numerous functional proteins with potential involvement in the biosynthesis, modification, and delivery process of conotoxins, which may shed light on the fundamental mechanisms for the generation of these important conotoxins within the venom duct of cone snails.

2019 ◽  
Vol 8 (2) ◽  
pp. 88 ◽  
Author(s):  
Xiao Zhou ◽  
Liang Cheng ◽  
Fangli Zhang ◽  
Zhaojin Yan ◽  
Xiaoguang Ruan ◽  
...  

Maritime search and rescue (SAR) operations are critical for ensuring safety at sea. Islands have been considered as feasible solutions for the construction of new maritime SAR bases to improve the capacity of SAR operations in remote sea areas. This paper proposes a new framework, based on island spatial information, for determining the optimal locations for maritime SAR bases. The framework comprises four steps. First, candidate islands for the construction of maritime SAR bases are selected. Second, the potential rescue demand is estimated by employing ship location data and marine incident data. In the third step, the response time from candidate islands to any site at sea is calculated, with explicit consideration of the impact of sea conditions on the ship’s speed. Fourth, the final island locations are proposed by solving the maximal covering location problem (MCLP). The proposed framework was applied to the South China Sea. The results showed that there would be a decrease of 1.09 h in terms of the mean access time for the South China Sea if the six selected island bases were constructed, whilst the primary coverage increased from 62.63% to 80.02% when using a 6-hour threshold. This new framework is expected to contribute to improvements in safety at sea and should be applicable to any sea area where the construction of island rescue bases is being considered.


Peptides ◽  
2009 ◽  
Vol 30 (10) ◽  
pp. 1782-1787 ◽  
Author(s):  
Zhuguo Liu ◽  
Ning Xu ◽  
Jie Hu ◽  
Chongjia Zhao ◽  
Zheng Yu ◽  
...  

2019 ◽  
Vol 69 (8) ◽  
pp. 839-848 ◽  
Author(s):  
Yuting Li ◽  
Xinyuan Zhu ◽  
Weimin Zhang ◽  
Daochen Zhu ◽  
Xiaojian Zhou ◽  
...  

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