scholarly journals ИЗУЧЕНИЕ ГЕНОМА АБК-УТИЛИЗИРУЮЩИХ РИЗОСФЕРНЫХ БАКТЕРИЙ RHODOCOCCUS SP. P1Y И NOVOSPHINGOBIUM SP. P6W

Author(s):  
Тарас Ермеккалиев ◽  
Keyword(s):  
2003 ◽  
Author(s):  
Charles Thomas Parker ◽  
Dorothea Taylor ◽  
George M Garrity
Keyword(s):  

2003 ◽  
Author(s):  
Charles Thomas Parker ◽  
Dorothea Taylor ◽  
George M Garrity
Keyword(s):  

2002 ◽  
Vol 2 (1) ◽  
pp. 319-324
Author(s):  
M.M. Critchley ◽  
N.J. Cromar ◽  
N. McClure ◽  
H.J. Fallowfield

This study investigated the potential for distribution system biofilm bacteria to elevate copper concentrations in drinking water. Biofilms were sampled from household copper reticulation pipes and grown on R2A agar. Laboratory coupon experiments were used to determine the effect of single isolate biofilms on aqueous copper concentrations. The majority of biofilm bacteria did not affect copper concentrations in comparison to sterile controls. However, several bacteria including Acidovorax delafieldii, Cytophaga johnsonae and Micrococcus kristinae were shown to significantly elevate copper concentrations in drinking water. In contrast, the bacteria Rhodococcus sp. and Xanthomonas maltophilia were shown to significantly decrease copper levels in comparison to controls. The significance of biofilm bacteria to increase copper concentrations in drinking water has implications for public health by increasing concentrations to levels toxic to humans.


Author(s):  
Pan Hu ◽  
Huanan Li ◽  
Wenjing Xiao ◽  
Xiaohang Xie ◽  
Yuxian Yang ◽  
...  

3 Biotech ◽  
2016 ◽  
Vol 6 (2) ◽  
Author(s):  
Ismailsab Mukram ◽  
Masarbo Ramesh ◽  
T. R. Monisha ◽  
Anand S. Nayak ◽  
T. B. Karegoudar
Keyword(s):  

2009 ◽  
Vol 76 (1) ◽  
pp. 375-377 ◽  
Author(s):  
Dockyu Kim ◽  
Choong Hwan Lee ◽  
Jung Nam Choi ◽  
Ki Young Choi ◽  
Gerben J. Zylstra ◽  
...  

ABSTRACT The metabolically versatile Rhodococcus sp. strain DK17 utilizes indan as a growth substrate via the o-xylene pathway. Metabolite and reverse transcription-PCR analyses indicate that o-xylene dioxygenase hydroxylates indan at the 4,5 position of the aromatic moiety to form cis-indan-4,5-dihydrodiol, which is dehydrogenated to 4,5-indandiol by a dehydrogenase. 4,5-Indandiol undergoes ring cleavage by a meta-cleavage dioxygenase.


2008 ◽  
Vol 74 (12) ◽  
pp. 3812-3822 ◽  
Author(s):  
Hamdy A. H. Aly ◽  
Nguyen B. Huu ◽  
Victor Wray ◽  
Howard Junca ◽  
Dietmar H. Pieper

ABSTRACT Rhodococcus sp. strain HA01, isolated through its ability to utilize dibenzofuran (DBF) as the sole carbon and energy source, was also capable, albeit with low activity, of transforming dibenzo-p-dioxin (DD). This strain could also transform 3-chlorodibenzofuran (3CDBF), mainly by angular oxygenation at the ether bond-carrying carbon (the angular position) and an adjacent carbon atom, to 4-chlorosalicylate as the end product. Similarly, 2-chlorodibenzofuran (2CDBF) was transformed to 5-chlorosalicylate. However, lateral oxygenation at the 3,4-positions was also observed and yielded the novel product 2-chloro-3,4-dihydro-3,4-dihydroxydibenzofuran. Two gene clusters encoding enzymes for angular oxygenation (dfdA1A2A3A4 and dbfA1A2) were isolated, and expression of both was observed during growth on DBF. Heterologous expression revealed that both oxygenase systems catalyze angular oxygenation of DBF and DD but exhibited complementary substrate specificity with respect to CDBF transformation. While DfdA1A2A3A4 oxygenase, with high similarity to DfdA1A2A3A4 oxygenase from Terrabacter sp. strain YK3, transforms 3CDBF by angular dioxygenation at a rate of 29% ± 4% that of DBF, 2CDBF was not transformed. In contrast, DbfA1A2 oxygenase, with high similarity to the DbfA1A2 oxygenase from Terrabacter sp. strain DBF63, exhibited complementary activity with angular oxygenase activity against 2CDBF but negligible activity against 3CDBF. Thus, Rhodococcus sp. strain HA01 constitutes the first described example of a bacterial strain where coexpression of two angular dioxygenases was observed. Such complementary activity allows for the efficient transformation of chlorinated DBFs.


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